Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 4.1e-190 667.9 343 100.0
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 6.2e-114 414.8 352 63.6
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 1.2e-104 384.0 346 61.6
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 7.2e-102 374.8 343 61.8
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 3.6e-101 372.5 329 62.0
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 1.2e-96 357.5 340 57.6
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 3.4e-96 355.9 344 58.4
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 3.4e-96 355.9 351 58.1
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 4.5e-96 355.5 355 55.5
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 2.9e-95 352.8 345 57.4
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 2.5e-94 349.7 352 54.8
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 3.2e-94 349.4 345 55.7
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 1.8e-92 343.6 347 57.1
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 2.3e-92 343.2 327 58.1
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 3.0e-92 342.8 351 53.6
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 3.0e-92 342.8 365 52.9
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 3.0e-92 342.8 359 53.5
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 6.7e-92 341.7 351 54.1
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 2.6e-91 339.7 348 55.5
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 2.8e-90 336.3 347 54.5
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 4.8e-90 335.5 348 54.6
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 6.3e-90 335.1 350 52.6
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 6.3e-90 335.1 348 54.6
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 8.2e-90 334.7 344 54.1
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 1.1e-89 334.3 353 53.3
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 1.1e-89 334.3 358 54.7
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 1.4e-89 334.0 354 53.1
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 1.8e-89 333.6 343 53.6
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 9.1e-89 331.3 358 54.7
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 1.2e-88 330.9 355 54.6
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 2.0e-88 330.1 340 54.4
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 2.0e-88 330.1 351 53.0
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 2.0e-88 330.1 343 54.2
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 2.6e-88 329.7 346 54.3
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 4.5e-88 328.9 349 54.2
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 7.7e-88 328.2 345 53.9
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 1.0e-87 327.8 354 52.5
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 1.7e-87 327.0 344 54.7
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 2.2e-87 326.6 345 53.6
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.9e-87 326.2 345 53.3
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 8.5e-87 324.7 344 53.5
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 7.2e-86 321.6 347 53.3
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 7.2e-86 321.6 352 52.3
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 7.2e-86 321.6 315 54.9
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 1.6e-85 320.5 351 50.4
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 2.7e-85 319.7 343 52.8
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 2.7e-85 319.7 357 52.7
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 1.0e-84 317.8 353 52.7
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 3.0e-84 316.2 355 52.7
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 3.9e-84 315.8 345 53.0
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 7.4e-83 311.6 342 50.9
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 7.4e-83 311.6 296 55.1
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 9.7e-83 311.2 349 51.3
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 1.3e-82 310.8 350 51.1
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 1.7e-82 310.5 341 51.3
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 2.8e-82 309.7 348 50.6
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 4.8e-82 308.9 344 53.5
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 8.2e-82 308.1 342 50.6
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 8.2e-82 308.1 340 51.5
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 8.2e-82 308.1 359 50.7
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 1.8e-81 307.0 340 50.9
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 2.4e-81 306.6 351 51.6
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 3.1e-81 306.2 340 50.3
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 5.3e-81 305.4 340 51.2
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 9.1e-81 304.7 356 48.9
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 4.5e-80 302.4 340 50.6
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 5.9e-80 302.0 350 49.7
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 7.7e-80 301.6 343 51.6
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 1.7e-79 300.4 340 49.1
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 3.8e-79 299.3 302 54.3
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 6.5e-79 298.5 352 50.6
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 1.1e-78 297.7 347 49.9
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 1.9e-78 297.0 345 48.1
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 2.5e-78 296.6 347 49.3
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 8.0e-77 291.6 299 53.2
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 7.5e-75 285.0 401 45.1
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 7.5e-75 285.0 350 50.0
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 4.8e-74 282.3 348 48.0
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 7.0e-73 278.5 346 47.7
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 9.1e-73 278.1 393 44.3
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 8.5e-71 271.6 346 45.1
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 2.5e-70 270.0 320 46.6
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 9.4e-70 268.1 349 46.4
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 9.4e-70 268.1 325 48.6
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 3.6e-69 266.2 345 45.5
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 1.2e-64 251.1 340 42.6
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 1.8e-60 237.3 295 42.7
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 5.6e-54 215.7 347 42.9
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 4.4e-51 206.1 287 44.9
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 2.2e-50 203.8 332 37.3
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 1.9e-49 200.7 212 51.4
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 2.4e-49 200.3 252 41.3
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 1.0e-47 194.9 224 48.2
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 1.1e-44 184.9 298 37.6
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 2.4e-28 130.6 96 61.5
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 1.3e-26 124.8 137 48.9
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 1.3e-26 124.8 251 37.1
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 6.4e-26 122.5 137 54.7
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 1.4e-25 121.3 321 28.7
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 7.1e-25 119.0 309 27.8
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 4.6e-24 116.3 147 48.3
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 3.4e-19 100.1 117 48.7
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 6.2e-13 79.3 306 23.2
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 6.9e-12 75.9 60 65.0
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 1.2e-11 75.1 116 38.8
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 9.9e-11 72.0 90 42.2
FAN28G2275 Fragaria x ananassa HOM05D000356 ORTHO05D000265 3.2e-09 67.0 71 57.7


User provided reference genes

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