Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 3.7e-182 641.3 310 100.0
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 4.2e-125 451.8 295 76.6
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 4.9e-118 428.3 274 77.0
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 1.1e-117 427.2 274 75.9
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 1.6e-116 423.3 274 76.6
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 5.1e-115 418.3 274 72.6
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 1.4e-112 410.2 274 71.9
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 3.4e-111 405.6 276 69.9
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.1e-109 400.6 275 70.5
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 1.4e-109 400.2 274 71.5
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 1.9e-109 399.8 272 69.9
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 2.5e-109 399.4 274 69.7
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 3.2e-109 399.1 274 70.4
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 4.2e-109 398.7 274 68.6
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 4.2e-109 398.7 285 68.8
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 2.7e-108 396.0 274 69.3
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 6.0e-108 394.8 273 70.3
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 7.9e-108 394.4 272 69.5
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 1.3e-107 393.7 275 68.7
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 3.9e-107 392.1 275 68.4
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.9e-107 392.1 275 68.4
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 5.1e-107 391.7 275 69.1
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 6.7e-107 391.3 274 68.6
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 6.7e-107 391.3 274 69.3
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 1.1e-106 390.6 259 74.1
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 1.9e-106 389.8 275 68.4
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 3.3e-106 389.0 275 68.4
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 3.3e-106 389.0 276 67.8
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 3.3e-106 389.0 273 69.2
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 4.3e-106 388.7 274 68.2
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 9.7e-106 387.5 274 68.2
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 9.7e-106 387.5 275 67.6
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 1.3e-105 387.1 274 68.6
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.3e-105 387.1 274 68.2
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 1.6e-105 386.7 274 67.2
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 1.6e-105 386.7 297 64.3
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 2.2e-105 386.3 275 67.6
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 2.8e-105 386.0 274 66.4
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 2.8e-105 386.0 273 68.9
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 2.8e-105 386.0 272 67.3
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 4.8e-105 385.2 275 67.3
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 4.8e-105 385.2 275 67.6
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 8.2e-105 384.4 275 67.3
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 1.1e-104 384.0 272 66.5
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 1.1e-104 384.0 275 67.3
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 2.4e-104 382.9 272 66.5
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 3.1e-104 382.5 274 67.9
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 4.1e-104 382.1 261 70.1
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 5.3e-104 381.7 272 66.9
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 9.0e-104 380.9 272 66.5
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 1.2e-103 380.6 272 66.2
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 1.2e-103 380.6 275 68.4
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 1.5e-103 380.2 288 64.9
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 2.0e-103 379.8 314 60.5
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 3.4e-103 379.0 272 66.9
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 4.5e-103 378.6 272 66.5
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 4.5e-103 378.6 275 66.9
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 5.9e-103 378.3 272 66.5
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 7.6e-103 377.9 272 66.2
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 7.6e-103 377.9 274 66.8
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 1.0e-102 377.5 275 66.2
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 1.3e-102 377.1 273 67.0
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 5.0e-102 375.2 270 65.2
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 6.5e-102 374.8 272 65.1
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 6.5e-102 374.8 274 64.6
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 8.5e-102 374.4 258 69.0
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 1.1e-101 374.0 284 65.8
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 1.4e-101 373.6 273 66.3
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 1.9e-101 373.2 272 65.4
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 5.5e-101 371.7 273 65.9
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 5.5e-101 371.7 273 65.9
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 5.5e-101 371.7 274 64.2
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.2e-100 370.5 272 66.2
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 1.6e-100 370.2 269 64.7
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 2.1e-100 369.8 275 65.8
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 4.6e-100 368.6 274 65.3
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 6.1e-100 368.2 275 63.3
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 7.9e-100 367.9 275 62.2
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 1.0e-99 367.5 275 65.5
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 1.3e-99 367.1 260 69.6
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 1.8e-99 366.7 272 63.6
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 1.8e-99 366.7 275 65.5
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 3.0e-99 365.9 275 65.5
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 1.9e-98 363.2 275 65.1
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 9.1e-96 354.4 255 66.7
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 9.1e-96 354.4 358 53.4
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 9.1e-96 354.4 274 60.9
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 1.0e-94 350.9 274 60.6
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 3.0e-91 339.3 245 66.5
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 7.4e-90 334.7 275 61.1
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 9.7e-90 334.3 300 57.7
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 1.1e-88 330.9 284 55.6
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 3.1e-88 329.3 273 59.3
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 2.0e-87 326.6 241 63.9
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 6.1e-84 315.1 243 64.6
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.0e-83 314.3 274 59.5
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 3.9e-83 312.4 235 64.7
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 5.2e-83 312.0 275 57.1
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 2.6e-82 309.7 236 64.0
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 7.4e-82 308.1 236 63.6
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 4.7e-76 288.9 283 48.8
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 8.2e-73 278.1 281 48.0
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 4.2e-69 265.8 316 45.9
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 4.7e-60 235.7 262 47.3
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 1.7e-57 227.3 291 42.6
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.8e-56 223.8 281 43.8
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.0e-54 218.0 130 81.5
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 1.0e-54 218.0 268 44.0
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 2.1e-52 210.3 268 43.7
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 1.4e-51 207.6 374 38.0
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 5.8e-50 202.2 177 58.8
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 3.0e-46 189.9 110 75.5
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.6e-36 157.5 96 76.0
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 2.3e-35 153.7 151 51.7
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 3.1e-35 153.3 83 78.3
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 7.1e-24 115.5 83 65.1
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 7.1e-24 115.5 83 65.1
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.1e-19 101.7 75 64.0
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 5.2e-19 99.4 59 71.2
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 7.1e-16 89.0 141 39.7
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 1.6e-15 87.8 138 40.6
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 2.7e-15 87.0 51 74.5
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 6.0e-15 85.9 62 61.3
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 1.3e-14 84.7 51 72.5
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 1.3e-14 84.7 51 72.5
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 8.1e-12 75.5 73 46.6
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 4.0e-11 73.2 43 72.1
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 4.9e-09 66.2 37 75.7
BcaC09g47773 Brassica carinata HOM05D005979 ORTHO05D007848 8.4e-09 65.5 38 71.1
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 1.0e-06 58.5 67 41.8
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 1.8e-06 57.8 77 37.7
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 3.9e-06 56.6 75 37.3
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 3.9e-06 56.6 94 36.2
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 5.1e-06 56.2 76 39.5
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 6.7e-06 55.8 80 37.5


User provided reference genes

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