Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19969 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 1.8e-185 652.5 346 100.0
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 1.8e-113 413.3 309 75.7
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 1.3e-106 390.6 237 82.7
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 1.6e-104 383.6 304 72.4
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 4.2e-102 375.6 304 67.1
Cc09_g03090 Coffea canephora HOM05D002281 ORTHO05D006774 7.2e-102 374.8 306 70.6
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 8.8e-100 367.9 228 78.9
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 1.5e-99 367.1 241 76.8
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 1.7e-98 363.6 227 79.3
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 3.7e-98 362.5 227 78.4
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 3.7e-98 362.5 228 77.6
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 1.1e-97 360.9 287 67.2
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 2.4e-97 359.8 227 78.0
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 2.4e-97 359.8 287 68.6
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 2.4e-97 359.8 304 63.8
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 4.1e-97 359.0 227 78.4
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 7.0e-97 358.2 231 77.1
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 9.1e-97 357.8 274 69.0
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 2.7e-96 356.3 227 77.5
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 2.3e-95 353.2 304 61.5
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 5.0e-95 352.1 231 74.0
CiPaw.07G076800 Carya illinoinensis HOM05D002281 ORTHO05D006774 6.6e-95 351.7 227 75.8
Cpa.g.sc51.34 Carica papaya HOM05D002281 ORTHO05D006774 2.5e-94 349.7 214 77.6
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 2.5e-94 349.7 226 75.7
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 4.2e-94 349.0 232 74.1
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 5.5e-94 348.6 218 77.1
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 9.5e-94 347.8 275 66.5
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 1.2e-93 347.4 227 74.9
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 2.8e-93 346.3 304 60.2
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 2.8e-93 346.3 228 71.5
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 2.8e-93 346.3 292 63.0
Actinidia39975 Actinidia chinensis HOM05D002281 ORTHO05D006774 6.1e-93 345.1 199 85.9
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 8.0e-93 344.7 291 63.6
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 8.0e-93 344.7 230 76.1
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 1.0e-92 344.4 281 60.9
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 1.0e-92 344.4 292 59.6
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 1.4e-92 344.0 225 73.8
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 1.8e-92 343.6 230 72.6
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 1.8e-92 343.6 228 73.2
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 2.3e-92 343.2 289 59.2
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 2.3e-92 343.2 227 73.6
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 3.0e-92 342.8 228 72.4
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 4.0e-92 342.4 243 67.9
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 6.8e-92 341.7 228 71.9
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 6.8e-92 341.7 228 71.9
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 1.5e-91 340.5 225 73.8
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.5e-91 340.5 225 73.8
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.5e-91 340.5 225 73.8
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 2.0e-91 340.1 243 67.5
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 2.0e-91 340.1 231 71.0
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 2.6e-91 339.7 310 61.0
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.6e-91 339.7 225 73.3
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 2.6e-91 339.7 228 74.6
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 3.4e-91 339.3 226 71.2
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 4.4e-91 339.0 291 59.5
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 4.4e-91 339.0 291 59.5
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 4.4e-91 339.0 291 59.5
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 5.7e-91 338.6 242 68.2
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 7.5e-91 338.2 295 63.4
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 9.8e-91 337.8 225 72.9
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 9.8e-91 337.8 227 71.8
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.3e-90 337.4 225 73.3
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 1.3e-90 337.4 224 71.4
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 1.7e-90 337.0 227 71.8
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 2.2e-90 336.7 227 71.8
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 2.2e-90 336.7 229 73.8
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 2.8e-90 336.3 227 70.5
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 3.7e-90 335.9 227 72.2
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 6.3e-90 335.1 238 68.5
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 4.1e-89 332.4 227 70.0
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 5.4e-89 332.0 211 75.8
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 7.0e-89 331.6 227 71.8
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 2.0e-88 330.1 243 68.7
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 3.5e-88 329.3 228 70.2
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 3.5e-88 329.3 227 70.0
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 5.9e-88 328.6 231 69.3
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 7.8e-88 328.2 228 71.9
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 7.8e-88 328.2 227 69.6
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 1.3e-87 327.4 228 70.2
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 1.3e-87 327.4 228 70.2
Hma1.2p1_0123F.1_g058090 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.7e-87 327.0 209 77.0
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 3.8e-87 325.9 216 72.2
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 6.6e-87 325.1 239 67.8
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 1.5e-86 323.9 227 68.3
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 2.5e-86 323.2 226 70.8
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 3.3e-86 322.8 231 67.5
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 2.8e-85 319.7 227 68.7
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 4.0e-84 315.8 227 67.8
Haze_04483 Corylus avellana HOM05D002281 ORTHO05D006774 8.3e-82 308.1 195 76.9
Ah.13g065840 Amaranthus hybridus HOM05D002281 ORTHO05D006774 4.1e-81 305.8 196 78.1
ClCG03G011350 Citrullus lanatus HOM05D002281 ORTHO05D006774 5.6e-78 295.4 192 74.5
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 8.0e-77 291.6 228 65.8
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 3.1e-76 289.7 291 55.3
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 4.0e-76 289.3 235 62.1
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 5.2e-76 288.9 227 62.1
CDE02G1511 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 2.9e-66 256.5 165 73.9
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 2.1e-61 240.4 232 51.7
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 4.7e-61 239.2 213 55.9
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 1.2e-53 214.5 211 48.8
Hma1.2p1_0463F.1_g158160 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.8e-52 210.7 150 68.7
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 3.0e-39 166.8 236 37.7
CDE08G0752 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 7.9e-16 89.0 63 71.4
CSS0012562 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 5.7e-14 82.8 141 55.3
Os10g0460900 Oryza sativa ssp. japonica HOM05D006403 ORTHO05D008130 2.8e-13 80.5 89 50.6
Os10g0461100 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 2.8e-13 80.5 89 50.6
CBR_g7996 Chara braunii HOM05D002281 ORTHO05D006774 2.0e-11 74.3 224 24.1


User provided reference genes

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