Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 8.9e-162 573.5 292 100.0
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 5.5e-87 325.1 208 83.2
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.7e-51 207.2 229 52.8
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 1.8e-45 187.2 182 57.7
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 8.9e-45 184.9 182 54.9
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 4.9e-43 179.1 182 55.5
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 5.4e-42 175.6 182 53.3
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 2.1e-41 173.7 182 52.7
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 8.7e-40 168.3 183 51.4
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 8.7e-40 168.3 182 52.2
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 1.5e-39 167.5 176 53.4
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 3.3e-39 166.4 182 50.5
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 4.3e-39 166.0 182 50.0
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 5.6e-39 165.6 182 50.5
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 7.3e-39 165.2 181 50.8
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 1.3e-38 164.5 182 48.9
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 1.3e-38 164.5 183 50.3
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 2.1e-38 163.7 181 50.8
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 2.1e-38 163.7 182 50.0
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 2.8e-38 163.3 182 51.6
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 4.8e-38 162.5 182 49.5
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 6.2e-38 162.2 181 46.4
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 6.2e-38 162.2 182 49.5
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 8.1e-38 161.8 181 48.1
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 2.4e-37 160.2 181 50.8
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 5.3e-37 159.1 182 50.0
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 9.0e-37 158.3 182 48.4
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 9.0e-37 158.3 186 46.8
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 9.0e-37 158.3 182 50.0
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 1.2e-36 157.9 229 42.4
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 1.5e-36 157.5 180 50.0
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 1.5e-36 157.5 182 49.5
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.0e-36 157.1 181 47.0
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.0e-36 157.1 181 47.0
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 2.6e-36 156.8 195 47.7
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 2.6e-36 156.8 178 50.6
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.4e-36 156.4 181 46.4
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.5e-36 156.0 193 49.2
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 5.8e-36 155.6 184 47.8
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 5.8e-36 155.6 182 46.2
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 5.8e-36 155.6 182 46.2
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 7.6e-36 155.2 181 46.4
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 7.6e-36 155.2 181 46.4
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 7.6e-36 155.2 181 46.4
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 7.6e-36 155.2 182 46.7
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 9.9e-36 154.8 186 47.3
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 9.9e-36 154.8 181 46.4
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 1.7e-35 154.1 181 45.9
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 1.7e-35 154.1 181 45.3
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.7e-35 154.1 132 66.7
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 2.2e-35 153.7 177 49.7
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 2.2e-35 153.7 181 47.5
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 2.9e-35 153.3 177 49.2
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 3.8e-35 152.9 178 50.6
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 3.8e-35 152.9 181 47.0
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 8.4e-35 151.8 177 48.0
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 8.4e-35 151.8 179 49.7
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 8.4e-35 151.8 180 48.9
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 8.4e-35 151.8 181 49.7
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.9e-34 150.6 182 46.2
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 1.9e-34 150.6 190 46.8
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 2.4e-34 150.2 179 49.2
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 2.4e-34 150.2 179 49.2
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 3.2e-34 149.8 178 47.8
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 3.2e-34 149.8 177 49.7
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 4.2e-34 149.4 181 45.9
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 4.2e-34 149.4 185 45.4
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 5.4e-34 149.1 179 49.2
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 5.4e-34 149.1 179 49.2
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 5.4e-34 149.1 179 49.2
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 7.1e-34 148.7 183 45.4
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 9.3e-34 148.3 179 48.0
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 9.3e-34 148.3 182 45.1
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 9.3e-34 148.3 183 47.0
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 9.3e-34 148.3 184 46.7
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 1.2e-33 147.9 179 49.2
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 1.2e-33 147.9 184 46.7
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 2.1e-33 147.1 182 47.8
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.1e-33 147.1 217 42.4
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.1e-33 147.1 181 45.3
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 2.1e-33 147.1 181 45.9
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 2.1e-33 147.1 165 52.1
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 2.7e-33 146.7 182 45.6
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 2.7e-33 146.7 184 45.7
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 2.7e-33 146.7 200 45.5
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 6.0e-33 145.6 182 45.6
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 6.0e-33 145.6 182 44.5
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 6.0e-33 145.6 181 44.2
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 6.0e-33 145.6 184 44.0
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 7.9e-33 145.2 183 45.9
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 7.9e-33 145.2 182 48.4
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 1.0e-32 144.8 184 45.1
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 1.0e-32 144.8 184 45.7
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 2.3e-32 143.7 175 48.6
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.3e-32 143.7 181 43.6
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 3.0e-32 143.3 180 48.3
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 3.0e-32 143.3 181 47.0
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 3.0e-32 143.3 182 45.1
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 3.0e-32 143.3 182 45.6
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 3.9e-32 142.9 181 47.0
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 3.9e-32 142.9 183 45.4
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.9e-32 142.9 184 45.1
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 3.9e-32 142.9 184 45.1
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 6.7e-32 142.1 230 38.7
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 8.7e-32 141.7 183 43.2
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.1e-31 141.4 184 44.6
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 3.3e-31 139.8 183 41.5
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 7.4e-31 138.7 178 48.3
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 7.4e-31 138.7 270 34.8
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 1.6e-30 137.5 230 38.3
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 2.1e-30 137.1 229 38.0
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 2.1e-30 137.1 229 38.0
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 4.8e-30 136.0 127 55.9
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 2.4e-29 133.7 182 44.0
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 2.4e-29 133.7 178 45.5
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 5.3e-29 132.5 181 45.3
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 6.9e-29 132.1 270 35.6
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 1.2e-28 131.3 214 38.8
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 1.5e-28 131.0 178 44.9
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 2.0e-28 130.6 177 42.9
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 2.0e-28 130.6 180 43.3
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 3.4e-28 129.8 177 42.9
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 3.4e-28 129.8 184 44.0
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 4.5e-28 129.4 194 41.8
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 9.9e-28 128.3 178 45.5
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 9.9e-28 128.3 178 41.6
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 2.2e-27 127.1 176 42.0
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 2.2e-27 127.1 151 49.0
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 2.9e-27 126.7 178 43.8
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 3.8e-27 126.3 179 43.6
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 1.1e-26 124.8 194 42.3
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 1.4e-26 124.4 230 37.0
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 2.4e-26 123.6 225 35.6
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 4.2e-26 122.9 184 40.8
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.6e-25 120.9 184 39.7
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 3.5e-25 119.8 188 40.4
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 3.0e-24 116.7 188 41.0
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 1.9e-23 114.0 154 44.8
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 2.5e-23 113.6 183 41.0
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 2.5e-23 113.6 217 33.2
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 9.6e-23 111.7 183 40.4
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.1e-21 108.2 156 46.2
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 3.1e-21 106.7 180 40.6
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 9.0e-21 105.1 188 36.2
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 6.0e-17 92.4 121 42.1
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 1.0e-16 91.7 185 37.8
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 6.7e-16 89.0 134 43.3
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 7.4e-15 85.5 166 34.3
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 1.6e-14 84.3 170 31.8
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 6.3e-14 82.4 185 28.6
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 2.4e-13 80.5 195 29.2
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 2.6e-12 77.0 179 33.0
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 4.5e-12 76.3 166 38.0
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 1.1e-10 71.6 168 31.0
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.9e-10 70.9 69 55.1
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 9.3e-10 68.6 122 34.4
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 1.8e-08 64.3 59 54.2
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 5.1e-08 62.8 55 61.8
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 5.1e-08 62.8 55 60.0
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 6.7e-08 62.4 75 50.7
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 3.7e-06 56.6 64 40.6


User provided reference genes

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