Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18124 Vaccinium macrocarpon HOM05D004464 ORTHO05D005135 1.5e-101 372.9 184 100.0
Actinidia26272 Actinidia chinensis HOM05D004464 ORTHO05D005135 8.0e-84 313.9 182 85.7
Actinidia17608 Actinidia chinensis HOM05D004464 ORTHO05D005135 1.1e-83 313.5 182 85.2
Duzib150G0689 Durio zibethinus HOM05D004464 ORTHO05D005135 2.2e-81 305.8 182 84.1
Dinv34904 Davidia involucrata HOM05D004464 ORTHO05D005135 2.9e-81 305.4 182 84.6
Dinv33871 Davidia involucrata HOM05D004464 ORTHO05D005135 3.7e-81 305.1 182 83.5
MD17G1066400 Malus domestica HOM05D004464 ORTHO05D005135 3.7e-81 305.1 182 83.5
PGR042G1328 Punica granatum HOM05D004464 ORTHO05D005135 3.7e-81 305.1 182 83.5
Eucgr.J01412 Eucalyptus grandis HOM05D004464 ORTHO05D005135 8.3e-81 303.9 181 82.9
Gohir.D05G003500 Gossypium hirsutum HOM05D004464 ORTHO05D005135 8.3e-81 303.9 182 82.4
Gorai.009G003100 Gossypium raimondii HOM05D004464 ORTHO05D005135 8.3e-81 303.9 182 82.4
Hma1.2p1_1837F.1_g304810 Hydrangea macrophylla HOM05D004464 ORTHO05D005135 1.1e-80 303.5 182 83.0
Prupe.3G248300 Prunus persica HOM05D004464 ORTHO05D005135 1.4e-80 303.1 182 82.4
Gohir.A05G003100 Gossypium hirsutum HOM05D004464 ORTHO05D005135 1.9e-80 302.8 182 82.4
Atru.chr12.814 Acer truncatum HOM05D004464 ORTHO05D005135 3.2e-80 302.0 182 80.2
Ciclev10012892m.g Citrus clementina HOM05D004464 ORTHO05D005135 4.1e-80 301.6 182 82.4
Thecc.01G298100 Theobroma cacao HOM05D004464 ORTHO05D005135 4.1e-80 301.6 182 82.4
MD09G1075700 Malus domestica HOM05D004464 ORTHO05D005135 7.1e-80 300.8 182 82.4
CSS0016516 Camellia sinensis var. sinensis HOM05D004464 ORTHO05D005135 9.2e-80 300.4 182 80.8
CSS0037173 Camellia sinensis var. sinensis HOM05D004464 ORTHO05D005135 1.2e-79 300.1 182 80.2
HanXRQChr15g0490131 Helianthus annuus HOM05D004464 ORTHO05D005135 1.2e-79 300.1 180 82.2
TAR371G0146 Trochodendron aralioides HOM05D004464 ORTHO05D005135 1.2e-79 300.1 182 81.3
GSVIVG01036537001 Vitis vinifera HOM05D004464 ORTHO05D005135 1.6e-79 299.7 182 81.3
COL.COLO4_21291 Corchorus olitorius HOM05D004464 ORTHO05D005135 2.1e-79 299.3 182 81.9
Migut.K00882 Erythranthe guttata HOM05D004464 ORTHO05D005135 2.1e-79 299.3 180 82.2
Nn4g23543 Nelumbo nucifera HOM05D004464 ORTHO05D005135 4.6e-79 298.1 182 81.3
Manes.01G100100 Manihot esculenta HOM05D004464 ORTHO05D005135 6.0e-79 297.7 182 80.8
RcHm_v2.0_Chr2g0164761 Rosa chinensis HOM05D004464 ORTHO05D005135 6.0e-79 297.7 182 81.3
SGA_v2.0_scaffold148G36455 Striga asiatica HOM05D004464 ORTHO05D005135 6.0e-79 297.7 182 81.3
Glyma.10G232700 Glycine max HOM05D004464 ORTHO05D005135 7.8e-79 297.4 182 79.1
Glyma.20G161600 Glycine max HOM05D004464 ORTHO05D005135 7.8e-79 297.4 182 79.1
MSTRG.15432 Avicennia marina HOM05D004464 ORTHO05D005135 1.7e-78 296.2 182 80.8
SalBow1G0807 Salvia bowleyana HOM05D004464 ORTHO05D005135 1.7e-78 296.2 182 80.8
Solyc02g089280.3 Solanum lycopersicum HOM05D004464 ORTHO05D005135 3.0e-78 295.4 182 80.2
CDE10G0456 Ceratophyllum demersum HOM05D004464 ORTHO05D005135 3.9e-78 295.0 182 79.1
FvH4_6g46310 Fragaria vesca HOM05D004464 ORTHO05D005135 3.9e-78 295.0 182 80.2
FAN02G0274 Fragaria x ananassa HOM05D004464 ORTHO05D005135 3.9e-78 295.0 182 80.2
FAN14G2017 Fragaria x ananassa HOM05D004464 ORTHO05D005135 3.9e-78 295.0 182 80.2
Phvul.007G072900 Phaseolus vulgaris HOM05D004464 ORTHO05D005135 3.9e-78 295.0 182 79.7
PGSC0003DMG400001469 Solanum tuberosum HOM05D004464 ORTHO05D005135 3.9e-78 295.0 182 80.2
CANSAT11G0238 Cannabis sativa HOM05D004464 ORTHO05D005135 5.1e-78 294.7 182 78.6
Lj3g0020854 Lotus japonicus HOM05D004464 ORTHO05D005135 5.1e-78 294.7 182 79.1
Lj4g0017621 Lotus japonicus HOM05D004464 ORTHO05D005135 5.1e-78 294.7 182 79.1
Sopen02g034060 Solanum pennellii HOM05D004464 ORTHO05D005135 5.1e-78 294.7 182 80.2
FAN09G0031 Fragaria x ananassa HOM05D004464 ORTHO05D005135 6.6e-78 294.3 182 80.2
MBI15_g04989_MAGBIO Magnolia biondii HOM05D004464 ORTHO05D005135 6.6e-78 294.3 182 80.2
MBI15_g11301_MAGBIO Magnolia biondii HOM05D004464 ORTHO05D005135 6.6e-78 294.3 182 80.2
Sabra17G0087000 Salix brachista HOM05D004464 ORTHO05D005135 6.6e-78 294.3 182 78.6
FAN05G3637 Fragaria x ananassa HOM05D004464 ORTHO05D005135 1.5e-77 293.1 182 79.7
Potri.017G101200 Populus trichocarpa HOM05D004464 ORTHO05D005135 1.5e-77 293.1 182 78.6
ClCG07G016070 Citrullus lanatus HOM05D004464 ORTHO05D005135 1.9e-77 292.7 181 79.0
Cc07_g04530 Coffea canephora HOM05D004464 ORTHO05D005135 3.3e-77 292.0 182 79.7
Nitab4.5_0001339g0030 Nicotiana tabacum HOM05D004464 ORTHO05D005135 3.3e-77 292.0 182 79.7
VMungo0720G0545 Vigna mungo HOM05D004464 ORTHO05D005135 3.3e-77 292.0 182 79.7
CANSAT64G2552 Cannabis sativa HOM05D004464 ORTHO05D005135 4.3e-77 291.6 182 77.5
CAN.G497.54 Capsicum annuum HOM05D004464 ORTHO05D005135 4.3e-77 291.6 182 79.7
Peaxi162Scf01039g00131 Petunia axillaris HOM05D004464 ORTHO05D005135 4.3e-77 291.6 182 80.2
Potri.004G113600 Populus trichocarpa HOM05D004464 ORTHO05D005135 5.6e-77 291.2 182 78.0
CDE10G0562 Ceratophyllum demersum HOM05D004464 ORTHO05D005135 1.2e-76 290.0 182 79.7
arahy.Tifrunner.gnm1.ann1.6V5APJ Arachis hypogaea HOM05D004464 ORTHO05D005135 1.6e-76 289.7 182 77.5
arahy.Tifrunner.gnm1.ann1.AQQ1ZC Arachis hypogaea HOM05D004464 ORTHO05D005135 1.6e-76 289.7 182 77.5
CsaV3_4G010040 Cucumis sativus L. HOM05D004464 ORTHO05D005135 3.6e-76 288.5 181 77.3
Hund16239 Selenicereus undatus HOM05D004464 ORTHO05D005135 3.6e-76 288.5 182 77.5
Psat7g017000 Pisum sativum HOM05D004464 ORTHO05D005135 4.7e-76 288.1 182 76.9
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 6.2e-76 287.7 182 79.1
TWI36G0525 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 6.2e-76 287.7 182 76.4
TWI36G0787 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 6.2e-76 287.7 182 76.4
Sabra10G0012000 Salix brachista HOM05D004464 ORTHO05D005135 8.1e-76 287.3 189 75.7
Sed0009719 Sechium edule HOM05D004464 ORTHO05D005135 8.1e-76 287.3 181 77.3
DCAR_016093 Daucus carota HOM05D004464 ORTHO05D005135 1.4e-75 286.6 182 76.9
Sc07g0002150 Simmondsia chinensis HOM05D004464 ORTHO05D005135 1.4e-75 286.6 180 78.3
TWI75G1858 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 1.4e-75 286.6 182 76.4
EL10Ac2g04433 Beta vulgaris HOM05D004464 ORTHO05D005135 6.8e-75 284.3 182 76.4
THA.LOC104820981 Tarenaya hassleriana HOM05D004464 ORTHO05D005135 8.9e-75 283.9 180 77.8
unitig_0.g1789 Utricularia gibba HOM05D004464 ORTHO05D005135 8.9e-75 283.9 181 76.2
Ah.16g101000 Amaranthus hybridus HOM05D004464 ORTHO05D005135 3.4e-74 282.0 182 76.9
TPR.G29907 Trifolium pratense HOM05D004464 ORTHO05D005135 3.4e-74 282.0 182 73.6
ATR0743G033 Amborella trichopoda HOM05D004464 ORTHO05D005135 4.4e-74 281.6 182 76.4
Medtr8g102530 Medicago truncatula HOM05D004464 ORTHO05D005135 4.4e-74 281.6 182 73.6
TPR.G23462 Trifolium pratense HOM05D004464 ORTHO05D005135 5.8e-74 281.2 182 73.6
Aqoxy3G02935 Aquilegia oxysepala HOM05D004464 ORTHO05D005135 7.6e-74 280.8 182 75.3
AT5G15750 Arabidopsis thaliana HOM05D004464 ORTHO05D005135 7.6e-74 280.8 180 75.6
Lalb_Chr16g0389591 Lupinus albus HOM05D004464 ORTHO05D005135 9.9e-74 280.4 182 75.8
BcaB01g05028 Brassica carinata HOM05D004464 ORTHO05D005135 1.7e-73 279.6 180 75.6
Aa31LG11G13830 Aethionema arabicum HOM05D004464 ORTHO05D005135 3.7e-73 278.5 178 77.5
AL6G26590 Arabidopsis lyrata HOM05D004464 ORTHO05D005135 3.7e-73 278.5 178 77.0
CiPaw.15G080600 Carya illinoinensis HOM05D004464 ORTHO05D005135 3.7e-73 278.5 183 74.9
Aa31LG2G910 Aethionema arabicum HOM05D004464 ORTHO05D005135 6.4e-73 277.7 178 77.0
Carub.0004s0609 Capsella rubella HOM05D004464 ORTHO05D005135 6.4e-73 277.7 178 77.0
Ah.10g038200 Amaranthus hybridus HOM05D004464 ORTHO05D005135 8.3e-73 277.3 182 75.8
AUR62023152 Chenopodium quinoa HOM05D004464 ORTHO05D005135 8.3e-73 277.3 182 75.8
Sp6g28370 Schrenkiella parvula HOM05D004464 ORTHO05D005135 8.3e-73 277.3 178 75.8
A03p07340 Brassica napus HOM05D004464 ORTHO05D005135 1.1e-72 276.9 180 73.9
C03p08530 Brassica napus HOM05D004464 ORTHO05D005135 1.1e-72 276.9 180 73.9
CiPaw.06G059900 Carya illinoinensis HOM05D004464 ORTHO05D005135 1.9e-72 276.2 183 74.3
QL09p044371 Quercus lobata HOM05D004464 ORTHO05D005135 1.9e-72 276.2 183 73.8
BraA03t10058Z Brassica rapa HOM05D004464 ORTHO05D005135 2.4e-72 275.8 180 73.3
AUR62009474 Chenopodium quinoa HOM05D004464 ORTHO05D005135 2.4e-72 275.8 182 75.3
Cfa007699 Carpinus fangiana HOM05D004464 ORTHO05D005135 4.1e-72 275.0 183 74.3
BcaNung02202 Brassica carinata HOM05D004464 ORTHO05D005135 9.2e-72 273.9 180 73.9
Carub.0006s1390 Capsella rubella HOM05D004464 ORTHO05D005135 2.1e-71 272.7 178 76.4
BcaC03g18447 Brassica carinata HOM05D004464 ORTHO05D005135 3.5e-71 271.9 180 74.4
C02p07950 Brassica napus HOM05D004464 ORTHO05D005135 3.5e-71 271.9 180 74.4
BolC2t06718H Brassica oleracea HOM05D004464 ORTHO05D005135 3.5e-71 271.9 180 74.4
CARHR197580 Cardamine hirsuta HOM05D004464 ORTHO05D005135 3.5e-71 271.9 178 74.2
A02p03200 Brassica napus HOM05D004464 ORTHO05D005135 4.6e-71 271.6 180 74.4
BraA02t05291Z Brassica rapa HOM05D004464 ORTHO05D005135 4.6e-71 271.6 180 74.4
ECA285G0012 Erigeron canadensis HOM05D004464 ORTHO05D005135 1.7e-70 269.6 184 72.8
QL02p065152 Quercus lobata HOM05D004464 ORTHO05D005135 1.7e-70 269.6 183 72.7
PSO782G4050 Papaver somniferum HOM05D004464 ORTHO05D005135 5.1e-70 268.1 182 73.6
PSO017G3712 Papaver somniferum HOM05D004464 ORTHO05D005135 1.9e-69 266.2 182 73.6
PSO198G0095 Papaver somniferum HOM05D004464 ORTHO05D005135 2.5e-69 265.8 182 73.1
Oeu033412.2 Olea europaea HOM05D004464 ORTHO05D005135 1.8e-67 259.6 227 61.7
MCO12G368 Micromonas commoda HOM05D004464 ORTHO05D005135 5.2e-67 258.1 181 70.2
DCAR_010215 Daucus carota HOM05D004464 ORTHO05D005135 1.2e-66 256.9 218 62.8
Duzib170G0747 Durio zibethinus HOM05D004464 ORTHO05D005135 1.2e-66 256.9 181 72.9
Mapoly0007s0196 Marchantia polymorpha HOM05D004464 ORTHO05D005135 4.4e-66 255.0 182 67.0
SHI12226 Sapria himalayana HOM05D004464 ORTHO05D005135 9.9e-66 253.8 183 66.1
Pp3c13_7750 Physcomitrium patens HOM05D004464 ORTHO05D005135 4.9e-65 251.5 182 65.4
SMO089G0012 Selaginella moellendorffii HOM05D004464 ORTHO05D005135 6.4e-65 251.1 182 65.4
Nitab4.5_0009887g0020 Nicotiana tabacum HOM05D004464 ORTHO05D005135 7.1e-64 247.7 152 80.3
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 3.5e-63 245.4 155 74.8
Atru.chr5.3325 Acer truncatum HOM05D004464 ORTHO05D005135 1.5e-61 240.0 182 68.7
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 3.6e-60 235.3 155 74.8
Zm00001eb280020 Zea mays HOM05D004464 ORTHO05D005135 1.4e-59 233.4 179 66.5
Cre03.g170750 Chlamydomonas reinhardtii HOM05D004464 ORTHO05D005135 1.8e-59 233.0 180 61.7
Haze_14377 Corylus avellana HOM05D004464 ORTHO05D005135 6.9e-59 231.1 186 66.1
Lsat_1_v5_gn_3_96881 Lactuca sativa HOM05D004464 ORTHO05D005135 6.9e-59 231.1 180 67.8
Glyma.16G058000 Glycine max HOM05D004464 ORTHO05D005135 3.4e-58 228.8 152 74.3
PSO478G4867 Papaver somniferum HOM05D004464 ORTHO05D005135 3.2e-56 222.2 181 64.6
Thhalv10014794m.g Eutrema salsugineum HOM05D004464 ORTHO05D005135 3.0e-54 215.7 136 77.2
SEGI_12415 Sequoiadendron giganteum HOM05D004464 ORTHO05D005135 2.6e-50 202.6 138 71.0
HPP92_025702 Vanilla planifolia HOM05D004464 ORTHO05D005135 1.7e-49 199.9 157 65.6
Nn3g17540 Nelumbo nucifera HOM05D004464 ORTHO05D005135 1.9e-48 196.4 185 59.5
BcaNung00660 Brassica carinata HOM05D004464 ORTHO05D005135 3.9e-46 188.7 156 59.0
SMO302G0020 Selaginella moellendorffii HOM05D004464 ORTHO05D005135 5.1e-46 188.3 173 56.6
Gorai.007G357000 Gossypium raimondii HOM05D004464 ORTHO05D005135 6.7e-46 188.0 179 59.8
AagrBONN_evm.TU.Sc2ySwM_362.1773 Anthoceros agrestis HOM05D004464 ORTHO05D005135 6.2e-44 181.4 152 59.2
Cpa.g.sc14.239 Carica papaya HOM05D004464 ORTHO05D005135 6.9e-43 177.9 114 79.8
MELO3C000036.2 Cucumis melo HOM05D004464 ORTHO05D005135 3.4e-42 175.6 149 59.1
Rhsim08G0077600 Rhododendron simsii HOM05D004464 ORTHO05D005135 1.0e-41 174.1 102 83.3
Cfa025099 Carpinus fangiana HOM05D002539 ORTHO05D005135 2.5e-40 169.5 185 45.9
Lju361C7T5 Lonicera japonica HOM05D004464 ORTHO05D005135 7.1e-40 167.9 100 81.0
BcaNung00661 Brassica carinata HOM05D004464 ORTHO05D005135 1.6e-39 166.8 156 54.5
Gorai.007G356600 Gossypium raimondii HOM05D004464 ORTHO05D005135 7.9e-39 164.5 100 82.0
Gorai.007G357200 Gossypium raimondii HOM05D004464 ORTHO05D005135 1.0e-38 164.1 99 80.8
CBR_g26031 Chara braunii HOM05D004464 ORTHO05D005135 6.9e-35 151.4 145 55.9
AagrBONN_evm.TU.Sc2ySwM_344.90 Anthoceros agrestis HOM05D004464 ORTHO05D005135 7.6e-34 147.9 135 59.3
ECA246G0747 Erigeron canadensis HOM05D004464 ORTHO05D005135 1.7e-33 146.7 105 67.6
BolC3t13358H Brassica oleracea HOM05D004464 ORTHO05D005135 3.2e-32 142.5 105 65.7
Oeu003765.1 Olea europaea HOM05D007961 ORTHO05D005135 4.3e-29 132.1 78 80.8
Lju361A7T16 Lonicera japonica HOM05D004464 ORTHO05D005135 1.1e-27 127.5 80 78.8
BolC1t00394H Brassica oleracea HOM05D004464 ORTHO05D005135 2.2e-25 119.8 86 62.8
MELO3C001556.2 Cucumis melo HOM05D004464 ORTHO05D005135 2.2e-25 119.8 80 72.5
AagrBONN_evm.TU.Sc2ySwM_368.3154 Anthoceros agrestis HOM05D004464 ORTHO05D005135 5.5e-24 115.2 101 57.4
SHI40216 Sapria himalayana HOM05D004464 ORTHO05D005135 1.7e-20 103.6 68 66.2
SHI12394 Sapria himalayana HOM05D004464 ORTHO05D005135 3.1e-19 99.4 105 50.5
C09p61360 Brassica napus HOM05D004464 ORTHO05D005135 1.5e-13 80.5 125 41.6
Thecc.01G298200 Theobroma cacao HOM05D004464 ORTHO05D005135 2.0e-13 80.1 106 49.1
MELO3C000032.2 Cucumis melo HOM05D004464 ORTHO05D005135 1.7e-12 77.0 52 75.0
BcaC04g18941 Brassica carinata HOM05D004464 ORTHO05D005135 6.1e-07 58.5 119 35.3
BolC9t58977H Brassica oleracea HOM05D004464 ORTHO05D005135 2.3e-06 56.6 80 41.2
MCO09G009 Micromonas commoda HOM05D001645 ORTHO05D001749 2.3e-06 56.6 159 25.2
SMO268G0058 Selaginella moellendorffii HOM05D001645 ORTHO05D001749 4.0e-06 55.8 132 30.3
FvH4_5g15210 Fragaria vesca HOM05D001645 ORTHO05D001749 8.8e-06 54.7 118 31.4
FAN08G3277 Fragaria x ananassa HOM05D001645 ORTHO05D001749 8.8e-06 54.7 118 31.4
FAN13G0214 Fragaria x ananassa HOM05D001645 ORTHO05D001749 8.8e-06 54.7 118 31.4
FAN18G1251 Fragaria x ananassa HOM05D001645 ORTHO05D001749 8.8e-06 54.7 118 31.4
RcHm_v2.0_Chr7g0180961 Rosa chinensis HOM05D001645 ORTHO05D001749 8.8e-06 54.7 118 31.4


User provided reference genes

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