Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18055 Vaccinium macrocarpon HOM05D006162 ORTHO05D007627 4.9e-165 584.3 280 100.0
Rhsim08G0004700 Rhododendron simsii HOM05D006162 ORTHO05D007627 3.9e-122 441.8 270 81.1
CSS0015273 Camellia sinensis var. sinensis HOM05D006162 ORTHO05D007627 1.0e-85 320.9 275 61.8
Dinv05774 Davidia involucrata HOM05D006162 ORTHO05D007627 3.8e-69 265.8 275 53.5
TAR625G0476 Trochodendron aralioides HOM05D006162 ORTHO05D007627 8.8e-66 254.6 278 52.2
Nitab4.5_0000184g0020 Nicotiana tabacum HOM05D006162 ORTHO05D007627 3.8e-61 239.2 265 48.7
Peaxi162Scf00025g03226 Petunia axillaris HOM05D006162 ORTHO05D007627 1.6e-59 233.8 265 48.3
GSVIVG01022265001 Vitis vinifera HOM05D006162 ORTHO05D007627 2.7e-59 233.0 275 50.5
Nitab4.5_0007426g0010 Nicotiana tabacum HOM05D006162 ORTHO05D007627 1.5e-57 227.3 265 47.9
PGSC0003DMG400019694 Solanum tuberosum HOM05D006162 ORTHO05D007627 4.4e-57 225.7 266 48.5
CAN.G452.13 Capsicum annuum HOM05D006162 ORTHO05D007627 1.7e-56 223.8 267 47.2
QL06p031367 Quercus lobata HOM05D006162 ORTHO05D007627 2.0e-54 216.9 266 48.5
Solyc04g051410.4 Solanum lycopersicum HOM05D006162 ORTHO05D007627 2.7e-54 216.5 268 47.8
Duzib187G0444 Durio zibethinus HOM05D006162 ORTHO05D007627 3.8e-53 212.6 266 46.6
RcHm_v2.0_Chr2g0118111 Rosa chinensis HOM05D006162 ORTHO05D007627 8.6e-53 211.5 263 46.8
Thecc.07G145700 Theobroma cacao HOM05D006162 ORTHO05D007627 1.9e-52 210.3 267 46.1
Sopen04g022820 Solanum pennellii HOM05D006162 ORTHO05D007627 4.2e-52 209.1 269 47.2
TWI79G1464 Tripterygium wilfordii HOM05D006162 ORTHO05D007627 7.2e-52 208.4 269 45.4
Cc07_g16680 Coffea canephora HOM05D006162 ORTHO05D007627 9.5e-52 208.0 278 44.6
Oeu001984.1 Olea europaea HOM05D006162 ORTHO05D007627 4.0e-50 202.6 267 44.6
Manes.12G145600 Manihot esculenta HOM05D006162 ORTHO05D007627 4.4e-49 199.1 261 44.4
Cfa002788 Carpinus fangiana HOM05D006162 ORTHO05D007627 1.3e-48 197.6 265 45.7
Gorai.013G176700 Gossypium raimondii HOM05D006162 ORTHO05D007627 1.7e-48 197.2 270 44.4
Ciclev10025253m.g Citrus clementina HOM05D006162 ORTHO05D007627 2.2e-48 196.8 271 42.4
Gohir.A13G151700 Gossypium hirsutum HOM05D006162 ORTHO05D007627 4.9e-48 195.7 270 44.1
Gohir.D13G156100 Gossypium hirsutum HOM05D006162 ORTHO05D007627 8.3e-48 194.9 270 44.1
Potri.007G077100 Populus trichocarpa HOM05D006162 ORTHO05D007627 5.4e-47 192.2 269 44.2
Aqoxy6G00404 Aquilegia oxysepala HOM05D006162 ORTHO05D007627 9.2e-47 191.4 278 43.5
Prupe.6G165900 Prunus persica HOM05D006162 ORTHO05D007627 3.5e-46 189.5 264 43.2
EL10Ac6g15232 Beta vulgaris HOM05D006162 ORTHO05D007627 7.8e-46 188.3 271 42.8
Glyma.08G145100 Glycine max HOM05D006162 ORTHO05D007627 1.3e-45 187.6 269 42.0
Hund19624 Selenicereus undatus HOM05D006162 ORTHO05D007627 1.3e-45 187.6 266 45.5
FAN28G1724 Fragaria x ananassa HOM05D006162 ORTHO05D007627 2.5e-44 183.3 269 42.8
Glyma.05G186500 Glycine max HOM05D006162 ORTHO05D007627 2.5e-44 183.3 270 41.5
COL.COLO4_17421 Corchorus olitorius HOM05D000398 ORTHO05D007627 3.3e-44 183.0 263 40.7
ECA238G0813 Erigeron canadensis HOM05D006162 ORTHO05D007627 5.6e-44 182.2 269 42.8
VMungo0251G2144 Vigna mungo HOM05D006162 ORTHO05D007627 9.5e-44 181.4 269 40.9
MBI17_g27203_MAGBIO Magnolia biondii HOM05D006162 ORTHO05D007627 1.2e-43 181.0 273 41.4
Phvul.002G267600 Phaseolus vulgaris HOM05D006162 ORTHO05D007627 1.2e-43 181.0 267 40.4
FAN23G1837 Fragaria x ananassa HOM05D006162 ORTHO05D007627 6.1e-43 178.7 269 41.3
HanXRQChr14g0446061 Helianthus annuus HOM05D006162 ORTHO05D007627 1.4e-42 177.6 269 40.1
Migut.H02454 Erythranthe guttata HOM05D006162 ORTHO05D007627 1.5e-41 174.1 270 40.4
Lsat_1_v5_gn_2_67341 Lactuca sativa HOM05D006162 ORTHO05D007627 1.5e-41 174.1 271 39.9
Ca_17673_v3 Cicer arietinum L. HOM05D006162 ORTHO05D007627 2.0e-41 173.7 267 39.3
Ah.02g123760 Amaranthus hybridus HOM05D006162 ORTHO05D007627 2.6e-41 173.3 263 43.3
MELO3C020973.2 Cucumis melo HOM05D006162 ORTHO05D007627 3.4e-41 172.9 260 41.9
arahy.Tifrunner.gnm1.ann1.QP02N2 Arachis hypogaea HOM05D006162 ORTHO05D007627 9.8e-41 171.4 261 41.0
FAN19G1907 Fragaria x ananassa HOM05D006162 ORTHO05D007627 2.2e-40 170.2 275 38.9
Sc16g0004090 Simmondsia chinensis HOM05D006162 ORTHO05D007627 2.2e-40 170.2 261 41.8
Atru.chr4.715 Acer truncatum HOM05D006162 ORTHO05D007627 2.9e-40 169.9 230 45.7
ClCG02G000880 Citrullus lanatus HOM05D006162 ORTHO05D007627 2.9e-40 169.9 263 40.7
AUR62003642 Chenopodium quinoa HOM05D006162 ORTHO05D007627 3.7e-40 169.5 272 40.8
SGA_v2.0_scaffold2G01268 Striga asiatica HOM05D006162 ORTHO05D007627 3.7e-40 169.5 262 40.8
arahy.Tifrunner.gnm1.ann1.2PK97N Arachis hypogaea HOM05D006162 ORTHO05D007627 4.9e-40 169.1 267 40.1
MD01G1015800 Malus domestica HOM05D006162 ORTHO05D007627 8.3e-40 168.3 263 41.1
TPR.G2184 Trifolium pratense HOM05D006162 ORTHO05D007627 8.3e-40 168.3 269 39.4
Sed0011946 Sechium edule HOM05D006162 ORTHO05D007627 4.1e-39 166.0 265 40.8
Haze_25085 Corylus avellana HOM05D006162 ORTHO05D007627 1.6e-38 164.1 331 36.6
Lj4g0017392 Lotus japonicus HOM05D006162 ORTHO05D007627 6.0e-38 162.2 266 37.2
THA.LOC104824832 Tarenaya hassleriana HOM05D006162 ORTHO05D007627 6.0e-38 162.2 266 39.1
Eucgr.H04890 Eucalyptus grandis HOM05D006162 ORTHO05D007627 1.0e-37 161.4 260 41.5
CsaV3_2G017830 Cucumis sativus L. HOM05D006162 ORTHO05D007627 1.3e-37 161.0 305 37.7
Medtr8g092350 Medicago truncatula HOM05D006162 ORTHO05D007627 1.3e-37 161.0 269 39.0
Psat7g049400 Pisum sativum HOM05D006162 ORTHO05D007627 2.5e-36 156.8 276 38.8
CDE08G0720 Ceratophyllum demersum HOM05D006162 ORTHO05D007627 9.5e-36 154.8 273 37.7
CiPaw.03G131500 Carya illinoinensis HOM05D006162 ORTHO05D007627 1.2e-35 154.5 265 39.2
FAN26G3317 Fragaria x ananassa HOM05D006162 ORTHO05D007627 8.1e-35 151.8 265 39.2
unitig_899.g14618 Utricularia gibba HOM05D006162 ORTHO05D007627 4.0e-34 149.4 267 36.7
Nn5g27123 Nelumbo nucifera HOM05D006162 ORTHO05D007627 6.8e-34 148.7 277 37.9
Aa31LG6G15910 Aethionema arabicum HOM05D006162 ORTHO05D007627 1.3e-32 144.4 258 39.5
Nitab4.5_0005242g0040 Nicotiana tabacum HOM05D006162 ORTHO05D007627 5.4e-31 139.0 176 44.9
ATR0584G096 Amborella trichopoda HOM05D006162 ORTHO05D007627 6.0e-30 135.6 271 35.8
PSO675G6781 Papaver somniferum HOM05D006162 ORTHO05D007627 6.0e-30 135.6 441 27.2
PGR102G2965 Punica granatum HOM05D006162 ORTHO05D007627 7.8e-30 135.2 265 36.6
Zm00001eb082910 Zea mays HOM05D006162 ORTHO05D007627 7.8e-30 135.2 263 35.7
AUR62017952 Chenopodium quinoa HOM05D006162 ORTHO05D007627 1.7e-29 134.0 233 38.6
AUR62044023 Chenopodium quinoa HOM05D006162 ORTHO05D007627 1.7e-29 134.0 233 38.6
PSO541G4150 Papaver somniferum HOM05D006162 ORTHO05D007627 2.3e-29 133.7 439 26.9
Thhalv10025021m.g Eutrema salsugineum HOM05D006162 ORTHO05D007627 6.6e-29 132.1 267 35.2
Lalb_Chr13g0296301 Lupinus albus HOM05D006162 ORTHO05D007627 8.6e-29 131.7 216 40.7
BraA08t34318Z Brassica rapa HOM05D006162 ORTHO05D007627 1.5e-28 131.0 266 34.6
BcaC01g00286 Brassica carinata HOM05D006162 ORTHO05D007627 4.3e-28 129.4 266 34.6
C03p77810 Brassica napus HOM05D006162 ORTHO05D007627 4.3e-28 129.4 266 34.6
Cpa.g.sc72.51 Carica papaya HOM05D006162 ORTHO05D000563 7.3e-28 128.6 254 35.8
Carub.0007s0129 Capsella rubella HOM05D006162 ORTHO05D007627 1.6e-27 127.5 264 33.7
A08p23610 Brassica napus HOM05D006162 ORTHO05D007627 2.1e-27 127.1 267 34.1
AT4G39370 Arabidopsis thaliana HOM05D006162 ORTHO05D007627 4.7e-27 125.9 264 35.6
HPP92_009257 Vanilla planifolia HOM05D006162 ORTHO05D007627 6.2e-27 125.6 293 32.4
BcaB03g12289 Brassica carinata HOM05D006162 ORTHO05D007627 1.1e-26 124.8 261 34.9
Sp7g36490 Schrenkiella parvula HOM05D006162 ORTHO05D007627 4.0e-26 122.9 267 33.3
BolC3t20037H Brassica oleracea HOM05D006162 ORTHO05D007627 6.8e-26 122.1 274 33.6
CANSAT01G0187 Cannabis sativa HOM05D006162 ORTHO05D007627 6.8e-26 122.1 275 35.3
AL7G11390 Arabidopsis lyrata HOM05D006162 ORTHO05D007627 9.9e-25 118.2 258 34.1
FvH4_1g23260 Fragaria vesca HOM05D006162 ORTHO05D007627 9.9e-25 118.2 140 44.3
Lj4A860G2 Lonicera japonica HOM05D006162 ORTHO05D007627 1.3e-24 117.9 243 34.2
Sabra07G0065000 Salix brachista HOM05D006162 ORTHO05D007627 2.9e-24 116.7 265 32.5
Nn5g27122 Nelumbo nucifera HOM05D006162 ORTHO05D007627 2.4e-23 113.6 208 39.4
SEGI_22619 Sequoiadendron giganteum HOM05D006162 ORTHO05D007627 5.1e-21 105.9 380 28.2
Hma1.2p1_0220F.1_g092950 Hydrangea macrophylla HOM05D006162 ORTHO05D007627 3.4e-17 93.2 74 64.9
vmacro18645 Vaccinium macrocarpon HOM05D006162 ORTHO05D007627 6.4e-16 89.0 88 58.0
DCAR_011464 Daucus carota HOM05D006162 ORTHO05D007627 1.0e-13 81.6 81 53.1
Lj1g0027635 Lotus japonicus HOM05D006162 ORTHO05D007627 1.3e-11 74.7 104 37.5
Lj1g0016947 Lotus japonicus HOM05D006162 ORTHO05D007627 3.1e-10 70.1 104 36.5
Pp3c18_18540 Physcomitrium patens HOM05D006162 ORTHO05D007627 2.6e-09 67.0 386 23.8
SMO340G0295 Selaginella moellendorffii HOM05D006162 ORTHO05D007627 9.9e-09 65.1 71 56.3
DCAR_011465 Daucus carota HOM05D006162 ORTHO05D007627 2.2e-08 63.9 190 28.4
Eucgr.H02776 Eucalyptus grandis HOM05D003912 ORTHO05D004409 9.3e-07 58.5 77 42.9
THA.LOC104801027 Tarenaya hassleriana HOM05D003912 ORTHO05D004409 1.6e-06 57.8 77 44.2
Manes.15G054100 Manihot esculenta HOM05D003912 ORTHO05D004409 2.7e-06 57.0 79 41.8
Potri.017G055600 Populus trichocarpa HOM05D003912 ORTHO05D004409 2.7e-06 57.0 79 41.8
HPP92_013626 Vanilla planifolia HOM05D003912 ORTHO05D004409 2.7e-06 57.0 77 42.9
Nitab4.5_0003502g0040 Nicotiana tabacum HOM05D003912 ORTHO05D004409 3.5e-06 56.6 74 41.9
TWI09G1517 Tripterygium wilfordii HOM05D003912 ORTHO05D004409 3.5e-06 56.6 79 44.3
Oeu049032.1 Olea europaea HOM05D003912 ORTHO05D004409 4.6e-06 56.2 73 45.2
CiPaw.01G120700 Carya illinoinensis HOM05D003912 ORTHO05D004409 6.0e-06 55.8 77 41.6
Duzib212G0883 Durio zibethinus HOM05D003912 ORTHO05D004409 6.0e-06 55.8 75 44.0
Zm00001eb102350 Zea mays HOM05D003912 ORTHO05D004409 6.0e-06 55.8 74 45.9
Atru.chr1.1293 Acer truncatum HOM05D001091 ORTHO05D001020 7.9e-06 55.5 80 36.2
Carub.0001s0410 Capsella rubella HOM05D003912 ORTHO05D004409 7.9e-06 55.5 74 44.6
Lalb_Chr13g0296311 Lupinus albus HOM05D006162 ORTHO05D007627 7.9e-06 55.5 48 47.9
Nitab4.5_0002260g0180 Nicotiana tabacum HOM05D003912 ORTHO05D004409 7.9e-06 55.5 75 42.7


User provided reference genes

Program Settings