Gene: Sopen04g022820
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g022820
- Transcript Identifier Sopen04g022820.1
- Gene Type Coding gene
- Location Spenn-ch04 : 61432738-61445194 : positive
Gene Family Information
- ID HOM05D006162
- #Genes/#Species 129/92
- Phylogenetic origin
- ID ORTHO05D007627
- #Genes/#Species 128/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen04g022820.1
Descriptions
- Description Encodes a ubiquitin-specific protease. | ubiquitin-specific protease 27 (UBP27) | FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 | BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 ., Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016579 | IEA | InterPro | protein deubiquitination |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004843 | IEA | InterPro | thiol-dependent deubiquitinase | |
GO:0008233 | ISO | PLAZA Integrative Orthology | peptidase activity | AT4G39370 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0031307 | ISO | PLAZA Integrative Orthology | integral component of mitochondrial outer membrane | AT4G39370 |
GO:0031966 | ISO | PLAZA Integrative Orthology | mitochondrial membrane | AT4G39370 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.3.1.1.12 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP27) |