Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.7e-131 472.6 237 100.0
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 4.9e-118 427.9 257 86.0
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 4.3e-98 361.7 238 77.7
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 1.5e-95 353.2 236 75.0
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 8.5e-94 347.4 236 73.7
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 2.1e-92 342.8 236 72.0
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 7.4e-90 334.3 236 71.6
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 1.7e-89 333.2 236 71.6
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 6.3e-89 331.3 236 69.9
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 8.2e-89 330.9 236 70.3
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 2.4e-88 329.3 236 69.9
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 3.1e-88 328.9 236 68.6
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 3.1e-88 328.9 235 69.4
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 9.1e-88 327.4 236 69.5
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 9.1e-88 327.4 236 69.5
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 1.2e-87 327.0 236 69.5
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 1.5e-87 326.6 253 66.0
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 2.0e-87 326.2 236 69.5
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 2.0e-87 326.2 236 69.9
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 2.6e-87 325.9 236 69.9
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 7.7e-87 324.3 236 70.3
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 1.7e-86 323.2 236 69.5
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 1.7e-86 323.2 236 65.7
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 2.2e-86 322.8 236 66.1
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 6.5e-86 321.2 236 69.5
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 1.1e-85 320.5 236 66.5
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 1.9e-85 319.7 236 67.8
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 5.5e-85 318.2 236 67.8
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 7.2e-85 317.8 236 66.1
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 7.2e-85 317.8 236 66.9
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 1.6e-84 316.6 238 67.2
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 3.6e-84 315.5 236 66.5
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 1.0e-83 313.9 236 66.1
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 1.4e-83 313.5 238 66.8
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 1.4e-83 313.5 236 66.5
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 1.8e-83 313.2 275 64.0
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 3.9e-83 312.0 236 66.1
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 5.1e-83 311.6 236 66.5
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 5.1e-83 311.6 236 66.5
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 5.1e-83 311.6 236 66.5
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 6.7e-83 311.2 236 65.3
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 3.3e-82 308.9 236 64.8
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 3.3e-82 308.9 236 64.8
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 5.7e-82 308.1 236 65.7
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 1.7e-81 306.6 236 64.4
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 2.8e-81 305.8 236 64.8
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 4.1e-80 302.0 236 66.1
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 9.1e-80 300.8 236 63.1
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 1.2e-79 300.4 236 62.7
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 1.5e-79 300.1 236 62.7
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 2.0e-79 299.7 236 61.9
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 7.7e-79 297.7 236 64.0
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 1.0e-78 297.4 236 61.9
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 1.3e-78 297.0 236 64.4
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 1.7e-78 296.6 236 64.0
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 2.9e-78 295.8 223 68.6
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 3.8e-78 295.4 235 63.0
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 3.8e-78 295.4 235 64.3
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 5.0e-78 295.0 236 63.6
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 2.5e-77 292.7 236 63.1
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 2.5e-77 292.7 236 63.1
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 2.5e-77 292.7 236 62.3
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 7.2e-77 291.2 236 61.4
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 2.7e-76 289.3 236 61.4
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 3.6e-76 288.9 236 63.6
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 4.7e-76 288.5 242 62.0
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 4.7e-76 288.5 236 61.0
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 3.0e-75 285.8 236 61.9
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 3.0e-75 285.8 235 62.6
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 5.2e-75 285.0 235 64.7
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 6.7e-75 284.6 236 61.9
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 8.8e-75 284.3 289 54.0
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 1.1e-74 283.9 236 61.9
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 1.5e-74 283.5 235 60.4
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 3.3e-74 282.3 235 61.3
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 1.7e-73 280.0 235 60.0
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 2.8e-73 279.3 235 60.0
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 8.2e-73 277.7 235 59.6
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 1.8e-72 276.6 236 62.7
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 3.1e-72 275.8 235 60.0
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 3.5e-71 272.3 235 59.1
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 1.0e-70 270.8 220 63.6
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 1.1e-69 267.3 237 61.2
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 1.9e-69 266.5 219 62.1
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 3.2e-69 265.8 238 56.7
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 5.5e-69 265.0 256 55.1
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 1.2e-68 263.8 238 56.7
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 3.0e-67 259.2 236 59.3
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 4.0e-67 258.8 236 56.4
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 6.8e-67 258.1 224 64.7
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 5.7e-66 255.0 223 64.6
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 8.3e-65 251.1 224 58.0
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 8.3e-65 251.1 224 58.0
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 7.0e-64 248.1 212 59.9
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 1.6e-63 246.9 228 57.5
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 1.0e-62 244.2 189 63.5
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 2.2e-62 243.0 193 61.1
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 1.9e-61 240.0 215 58.1
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 4.2e-61 238.8 189 61.4
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 6.1e-60 235.0 247 51.8
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 2.6e-58 229.6 202 56.9
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 1.2e-55 220.7 289 49.5
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 9.5e-53 211.1 174 63.8
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 4.4e-50 202.2 144 66.0
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 9.8e-50 201.1 143 67.1
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 6.3e-49 198.4 176 60.8
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 1.2e-47 194.1 233 48.9
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 2.0e-47 193.4 129 68.2
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 2.1e-44 183.3 236 47.9
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 9.8e-42 174.5 136 64.7
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 7.0e-40 168.3 139 62.6
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 1.0e-38 164.5 187 49.7
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 3.6e-36 156.0 138 60.9
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 4.0e-35 152.5 144 55.6
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 8.9e-35 151.4 131 60.3
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 3.6e-28 129.4 229 34.1
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 1.4e-27 127.5 112 55.4
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 9.2e-24 114.8 232 32.3
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 9.6e-21 104.8 76 67.1
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 7.1e-16 88.6 66 62.1
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 9.9e-10 68.2 43 74.4
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 4.9e-09 65.9 83 44.6


User provided reference genes

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