Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17627 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 6.1e-308 1060.1 566 100.0
vmacro16181 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 4.6e-122 442.6 365 69.0
Rhsim08G0143500 Rhododendron simsii HOM05D006809 ORTHO05D008609 4.6e-114 416.0 381 62.5
CSS0043969 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 9.0e-110 401.7 344 64.2
Actinidia04809 Actinidia chinensis HOM05D006809 ORTHO05D008609 3.8e-108 396.4 334 65.0
Dinv22761 Davidia involucrata HOM05D006809 ORTHO05D008609 1.2e-106 391.3 331 64.4
Nn4g23476 Nelumbo nucifera HOM05D006809 ORTHO05D008609 1.5e-104 384.4 330 62.4
Cfa019358 Carpinus fangiana HOM05D006809 ORTHO05D008609 2.4e-102 377.1 330 61.2
Hma1.2p1_0060F.1_g032880 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 4.1e-102 376.3 329 62.0
CiPaw.12G009200 Carya illinoinensis HOM05D006809 ORTHO05D008609 1.2e-101 374.8 330 60.3
MSTRG.11330 Avicennia marina HOM05D006809 ORTHO05D008609 3.4e-101 373.2 346 59.5
QL10p020149 Quercus lobata HOM05D006809 ORTHO05D008609 2.9e-100 370.2 332 59.9
Cpa.g.sc94.80 Carica papaya HOM05D006809 ORTHO05D008609 3.8e-100 369.8 331 59.2
TAR629G2676 Trochodendron aralioides HOM05D006809 ORTHO05D008609 3.8e-100 369.8 330 60.6
Manes.14G087700 Manihot esculenta HOM05D006809 ORTHO05D008609 1.2e-98 364.8 330 58.2
PSO017G0895 Papaver somniferum HOM05D006809 ORTHO05D008609 2.1e-98 364.0 332 59.6
PSO478G2035 Papaver somniferum HOM05D006809 ORTHO05D008609 1.8e-97 360.9 332 59.3
Ciclev10023968m.g Citrus clementina HOM05D006809 ORTHO05D008609 3.0e-97 360.1 343 58.6
Thecc.03G104800 Theobroma cacao HOM05D006809 ORTHO05D008609 3.0e-97 360.1 330 59.4
HanXRQChr05g0154271 Helianthus annuus HOM05D006809 ORTHO05D008609 3.9e-97 359.8 331 58.9
Duzib205G0618 Durio zibethinus HOM05D006809 ORTHO05D008609 5.1e-97 359.4 330 59.1
CSS0020904 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 1.5e-96 357.8 300 63.7
Cc11_g04700 Coffea canephora HOM05D006809 ORTHO05D008609 1.3e-95 354.8 338 59.2
Gohir.A07G067300 Gossypium hirsutum HOM05D006809 ORTHO05D008609 1.3e-95 354.8 330 58.5
Atru.chr9.503 Acer truncatum HOM05D006809 ORTHO05D008609 8.2e-95 352.1 326 58.3
Aqoxy3G03648 Aquilegia oxysepala HOM05D006809 ORTHO05D008609 1.1e-94 351.7 320 59.4
COL.COLO4_24315 Corchorus olitorius HOM05D006809 ORTHO05D008609 2.4e-94 350.5 330 58.2
Gohir.D07G071900 Gossypium hirsutum HOM05D006809 ORTHO05D008609 2.4e-94 350.5 330 57.6
Gorai.001G076000 Gossypium raimondii HOM05D006809 ORTHO05D008609 2.4e-94 350.5 330 57.6
MD06G1203600 Malus domestica HOM05D006809 ORTHO05D008609 5.3e-94 349.4 330 57.6
TWI81G0697 Tripterygium wilfordii HOM05D006809 ORTHO05D008609 6.9e-94 349.0 328 56.1
CANSAT11G1370 Cannabis sativa HOM05D006809 ORTHO05D008609 1.2e-93 348.2 330 57.3
Sopen12g018840 Solanum pennellii HOM05D006809 ORTHO05D008609 1.2e-93 348.2 337 56.1
GSVIVG01008127001 Vitis vinifera HOM05D006809 ORTHO05D008609 2.6e-93 347.1 332 57.8
Lsat_1_v5_gn_5_23620 Lactuca sativa HOM05D006809 ORTHO05D008609 7.7e-93 345.5 321 59.5
Sc12g0007330 Simmondsia chinensis HOM05D006809 ORTHO05D008609 3.8e-92 343.2 329 55.6
FAN08G0740 Fragaria x ananassa HOM05D006809 ORTHO05D008609 5.0e-92 342.8 330 56.1
CsaV3_1G006160 Cucumis sativus L. HOM05D006809 ORTHO05D008609 1.1e-91 341.7 329 55.6
ECA246G1387 Erigeron canadensis HOM05D006809 ORTHO05D008609 1.1e-91 341.7 325 59.7
RcHm_v2.0_Chr7g0183371 Rosa chinensis HOM05D006809 ORTHO05D008609 1.6e-90 337.8 330 55.5
MELO3C002045.2 Cucumis melo HOM05D006809 ORTHO05D008609 3.6e-90 336.7 337 54.0
FAN13G1268 Fragaria x ananassa HOM05D006809 ORTHO05D008609 7.9e-90 335.5 336 53.9
Haze_07749 Corylus avellana HOM05D006809 ORTHO05D008609 8.8e-89 332.0 330 57.3
DCAR_010163 Daucus carota HOM05D006809 ORTHO05D008609 2.0e-88 330.9 339 54.6
Eucgr.K02539 Eucalyptus grandis HOM05D006809 ORTHO05D008609 3.7e-87 326.6 337 54.9
FAN18G0725 Fragaria x ananassa HOM05D006809 ORTHO05D008609 3.1e-86 323.6 330 53.6
Medtr2g060520 Medicago truncatula HOM05D006809 ORTHO05D008609 3.1e-86 323.6 333 52.6
Lj5A134T75 Lonicera japonica HOM05D006809 ORTHO05D008609 2.0e-85 320.9 332 54.8
ATR0827G115 Amborella trichopoda HOM05D006809 ORTHO05D008609 2.9e-84 317.0 324 54.9
ClCG04G011640 Citrullus lanatus HOM05D006809 ORTHO05D000432 1.5e-83 314.7 329 52.6
arahy.Tifrunner.gnm1.ann1.23QZVI Arachis hypogaea HOM05D006809 ORTHO05D008609 9.4e-83 312.0 319 55.5
PGR044G2265 Punica granatum HOM05D006809 ORTHO05D008609 9.4e-83 312.0 332 53.6
Nitab4.5_0001723g0010 Nicotiana tabacum HOM05D006809 ORTHO05D008609 1.2e-82 311.6 351 53.8
Oeu014424.1 Olea europaea HOM05D006809 ORTHO05D008609 1.6e-82 311.2 299 57.9
EL10Ac5g11165 Beta vulgaris HOM05D006809 ORTHO05D008609 8.0e-82 308.9 329 53.8
SGA_v2.0_scaffold313G48281 Striga asiatica HOM05D006809 ORTHO05D008609 3.0e-81 307.0 373 50.4
Lj1g0027663 Lotus japonicus HOM05D006809 ORTHO05D008609 7.5e-80 302.4 323 51.7
Ca_02916_v3 Cicer arietinum L. HOM05D006809 ORTHO05D008609 2.8e-79 300.4 327 52.0
Sed0027469 Sechium edule HOM05D006809 ORTHO05D008609 3.7e-79 300.1 299 54.5
Glyma.06G205000 Glycine max HOM05D006809 ORTHO05D008609 1.6e-77 294.7 322 50.9
SalBow5G3990 Salvia bowleyana HOM05D006809 ORTHO05D008609 4.5e-77 293.1 334 50.3
Phvul.009G203000 Phaseolus vulgaris HOM05D006809 ORTHO05D008609 2.9e-76 290.4 322 50.9
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 5.0e-76 289.7 290 53.1
Carub.0008s2163 Capsella rubella HOM05D006809 ORTHO05D008609 2.5e-75 287.3 332 47.9
CARHR274620 Cardamine hirsuta HOM05D006809 ORTHO05D008609 3.2e-75 287.0 332 48.5
AT5G60940 Arabidopsis thaliana HOM05D006809 ORTHO05D008609 4.2e-75 286.6 332 47.9
Thhalv10004278m.g Eutrema salsugineum HOM05D006809 ORTHO05D008609 1.2e-74 285.0 329 48.3
Lalb_Chr07g0189231 Lupinus albus HOM05D006809 ORTHO05D008609 1.2e-74 285.0 312 51.3
Mapoly0118s0024 Marchantia polymorpha HOM05D006809 ORTHO05D008609 1.2e-74 285.0 327 48.0
Aa31LG11G2360 Aethionema arabicum HOM05D006809 ORTHO05D008609 1.5e-72 278.1 332 46.1
AagrBONN_evm.TU.Sc2ySwM_117.1929 Anthoceros agrestis HOM05D006809 ORTHO05D008609 2.6e-72 277.3 332 48.2
Sp2g24250 Schrenkiella parvula HOM05D006809 ORTHO05D008609 5.7e-72 276.2 332 46.7
Os03g0754900 Oryza sativa ssp. japonica HOM05D006809 ORTHO05D008609 2.8e-71 273.9 336 47.3
BcaC06g33207 Brassica carinata HOM05D006809 ORTHO05D008609 1.8e-70 271.2 341 46.3
AL8G37560 Arabidopsis lyrata HOM05D006809 ORTHO05D008609 3.1e-70 270.4 332 46.4
CDE10G1159 Ceratophyllum demersum HOM05D006809 ORTHO05D008609 3.1e-70 270.4 331 48.0
BcaNung06908 Brassica carinata HOM05D006809 ORTHO05D008609 4.1e-70 270.0 332 46.4
BolC7t44995H Brassica oleracea HOM05D006809 ORTHO05D008609 7.0e-70 269.2 335 46.3
C07p44720 Brassica napus HOM05D006809 ORTHO05D008609 9.1e-70 268.9 335 46.3
Thecc.K0005900 Theobroma cacao HOM05D006809 ORTHO05D008609 1.2e-69 268.5 160 81.2
Pp3c18_4200 Physcomitrium patens HOM05D006809 ORTHO05D008609 1.3e-68 265.0 325 47.4
Hund09945 Selenicereus undatus HOM05D006809 ORTHO05D008609 1.3e-68 265.0 294 49.7
BraA03t13789Z Brassica rapa HOM05D006809 ORTHO05D008609 1.8e-65 254.6 331 44.7
AUR62032115 Chenopodium quinoa HOM05D006809 ORTHO05D008609 1.8e-65 254.6 269 53.9
FvH4_5g13570 Fragaria vesca HOM05D006809 ORTHO05D008609 1.8e-65 254.6 141 80.9
Peaxi162Scf01223g00014 Petunia axillaris HOM05D006809 ORTHO05D008609 1.8e-65 254.6 338 45.9
Nitab4.5_0001797g0090 Nicotiana tabacum HOM05D006809 ORTHO05D008609 2.3e-65 254.2 363 46.0
Zm00001eb057630 Zea mays HOM05D006809 ORTHO05D008609 3.0e-65 253.8 331 44.7
Solyc12g038527.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 1.2e-64 251.9 141 80.9
A03p46650 Brassica napus HOM05D006809 ORTHO05D008609 1.5e-64 251.5 331 44.4
Hma1.2p1_0060F.1_g032870 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 1.5e-64 251.5 333 46.5
SMO358G0618 Selaginella moellendorffii HOM05D006809 ORTHO05D008609 1.7e-63 248.1 326 45.4
VMungo1309G1606 Vigna mungo HOM05D006809 ORTHO05D008609 4.5e-61 240.0 280 48.2
Prupe.5G207700 Prunus persica HOM05D006809 ORTHO05D008609 2.8e-58 230.7 193 61.1
AUR62039658 Chenopodium quinoa HOM05D006809 ORTHO05D008609 2.8e-50 204.1 346 39.6
Psat6g135880 Pisum sativum HOM05D006809 ORTHO05D008609 1.2e-34 152.1 95 72.6
Medtr6g088180 Medicago truncatula HOM05D006809 ORTHO05D008609 1.4e-33 148.7 275 39.3
TPR.G23013 Trifolium pratense HOM05D007385 ORTHO05D009349 3.4e-32 144.1 116 65.5
Solyc12g038523.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 1.9e-30 138.3 109 67.9
Ah.11g047540 Amaranthus hybridus HOM05D006809 ORTHO05D008609 2.4e-30 137.9 300 33.3
CAN.G131.10 Capsicum annuum HOM05D006809 ORTHO05D008609 1.8e-25 121.7 137 58.4
arahy.Tifrunner.gnm1.ann1.BJ4A4M Arachis hypogaea HOM05D006809 ORTHO05D008609 1.5e-24 118.6 103 62.1
Haze_26316 Corylus avellana HOM05D006809 ORTHO05D008609 2.7e-21 107.8 140 40.7
MD14G1214700 Malus domestica HOM05D006809 ORTHO05D008609 6.0e-21 106.7 96 62.5
SEGI_17180 Sequoiadendron giganteum HOM05D006809 ORTHO05D008609 3.9e-20 104.0 61 75.4
CBR_g71889 Chara braunii HOM05D006809 ORTHO05D008609 9.0e-17 92.8 76 59.2
vmacro05088 Vaccinium macrocarpon HOM05D003985 ORTHO05D005253 2.0e-16 91.7 57 84.2
vmacro15092 Vaccinium macrocarpon HOM05D005784 ORTHO05D007803 2.6e-16 91.3 57 84.2
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 3.4e-16 90.9 57 84.2
vmacro23149 Vaccinium macrocarpon HOM05D064014 ORTHO05D000047 1.1e-14 85.9 81 61.7
Psat1g128360 Pisum sativum HOM05D006809 ORTHO05D008609 2.4e-14 84.7 51 68.6
vmacro22529 Vaccinium macrocarpon HOM05D004082 ORTHO05D004729 4.6e-13 80.5 60 73.3
Psat1g128400 Pisum sativum HOM05D006809 ORTHO05D008609 6.7e-12 76.6 60 66.7
vmacro09324 Vaccinium macrocarpon HOM05D001891 ORTHO05D004048 8.7e-12 76.3 73 65.8
vmacro03436 Vaccinium macrocarpon HOM05D005567 ORTHO05D005651 2.6e-08 64.7 39 82.1
vmacro19885 Vaccinium macrocarpon HOM05D000846 ORTHO05D006755 7.6e-08 63.2 109 39.4
Duzib192G0624 Durio zibethinus HOM05D000836 ORTHO05D000709 4.2e-06 57.4 171 25.1
arahy.Tifrunner.gnm1.ann1.S3QGNL Arachis hypogaea HOM05D000640 ORTHO05D008148 5.5e-06 57.0 51 62.7


User provided reference genes

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