Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17464 Vaccinium macrocarpon HOM05D005087 ORTHO05D006427 1.0e-64 250.0 131 100.0
Rhsim01G0127000 Rhododendron simsii HOM05D005087 ORTHO05D006427 4.3e-47 191.4 117 83.8
CSS0029256 Camellia sinensis var. sinensis HOM05D005087 ORTHO05D006427 2.7e-41 172.2 117 74.4
Lj9C640G8 Lonicera japonica HOM05D005087 ORTHO05D006427 2.8e-38 162.2 117 69.2
Nitab4.5_0002388g0080 Nicotiana tabacum HOM05D005087 ORTHO05D006427 1.1e-37 160.2 118 68.6
Solyc01g087720.4 Solanum lycopersicum HOM05D005087 ORTHO05D006427 2.4e-37 159.1 117 67.5
Sopen01g034670 Solanum pennellii HOM05D005087 ORTHO05D006427 2.4e-37 159.1 117 67.5
Lju99A9T21 Lonicera japonica HOM05D005087 ORTHO05D006427 9.0e-37 157.1 117 67.5
TAR623G1255 Trochodendron aralioides HOM05D005087 ORTHO05D006427 1.5e-36 156.4 117 69.2
Peaxi162Scf00694g00319 Petunia axillaris HOM05D005087 ORTHO05D006427 2.0e-36 156.0 117 65.8
SGA_v2.0_scaffold42G16189 Striga asiatica HOM05D005087 ORTHO05D006427 2.0e-36 156.0 117 69.2
SGA_v2.0_scaffold119G32758 Striga asiatica HOM05D005087 ORTHO05D006427 3.4e-36 155.2 117 69.2
Migut.B01270 Erythranthe guttata HOM05D005087 ORTHO05D006427 4.4e-36 154.8 117 65.0
SalBow5G0870 Salvia bowleyana HOM05D005087 ORTHO05D006427 2.9e-35 152.1 117 65.8
SalBow5G2001 Salvia bowleyana HOM05D005087 ORTHO05D006427 2.9e-35 152.1 117 65.8
Lsat_1_v5_gn_1_103161 Lactuca sativa HOM05D005087 ORTHO05D006427 8.4e-35 150.6 117 66.7
Hma1.2p1_0685F.1_g203150 Hydrangea macrophylla HOM05D005087 ORTHO05D006427 1.9e-34 149.4 117 66.7
HanXRQChr01g0007751 Helianthus annuus HOM05D005087 ORTHO05D006427 4.2e-34 148.3 117 65.0
PSO339G3397 Papaver somniferum HOM05D005087 ORTHO05D006427 7.1e-34 147.5 117 65.0
QL04p009808 Quercus lobata HOM05D005087 ORTHO05D006427 7.1e-34 147.5 117 63.2
MSTRG.17010 Avicennia marina HOM05D005087 ORTHO05D006427 1.2e-33 146.7 117 64.1
Ciclev10030582m.g Citrus clementina HOM05D005087 ORTHO05D006427 1.2e-33 146.7 117 64.1
CsaV3_7G030750 Cucumis sativus L. HOM05D005087 ORTHO05D006427 1.2e-33 146.7 117 63.2
Medtr4g115050 Medicago truncatula HOM05D005087 ORTHO05D006427 1.2e-33 146.7 117 61.5
Dinv09311 Davidia involucrata HOM05D005087 ORTHO05D006427 2.1e-33 146.0 117 62.4
Medtr3g033470 Medicago truncatula HOM05D005087 ORTHO05D006427 2.1e-33 146.0 117 60.7
GSVIVG01032195001 Vitis vinifera HOM05D005087 ORTHO05D006427 2.7e-33 145.6 117 64.1
Cc02_g28540 Coffea canephora HOM05D005087 ORTHO05D006427 3.5e-33 145.2 117 62.4
Thhalv10012535m.g Eutrema salsugineum HOM05D005087 ORTHO05D006427 4.6e-33 144.8 117 61.5
Gohir.D13G161900 Gossypium hirsutum HOM05D005087 ORTHO05D006427 6.0e-33 144.4 117 64.1
Gorai.013G183900 Gossypium raimondii HOM05D005087 ORTHO05D006427 6.0e-33 144.4 117 64.1
Eucgr.G03334 Eucalyptus grandis HOM05D005087 ORTHO05D006427 7.9e-33 144.1 117 62.4
MD07G1021900 Malus domestica HOM05D005087 ORTHO05D006427 7.9e-33 144.1 117 63.2
Atru.chr11.2578 Acer truncatum HOM05D005087 ORTHO05D006427 1.3e-32 143.3 117 62.4
Oeu049480.1 Olea europaea HOM05D005087 ORTHO05D006427 1.3e-32 143.3 164 50.6
BcaB01g05014 Brassica carinata HOM05D005087 ORTHO05D006427 2.3e-32 142.5 117 61.5
Duzib177G0717 Durio zibethinus HOM05D005087 ORTHO05D006427 2.3e-32 142.5 117 63.2
ECA248G2604 Erigeron canadensis HOM05D005087 ORTHO05D006427 2.3e-32 142.5 117 61.5
VMungo0251G2588 Vigna mungo HOM05D005087 ORTHO05D006427 2.3e-32 142.5 117 60.7
MELO3C023581.2 Cucumis melo HOM05D005087 ORTHO05D006427 3.0e-32 142.1 117 60.7
Sp6g28190 Schrenkiella parvula HOM05D005087 ORTHO05D006427 3.0e-32 142.1 117 61.5
Gohir.A13G157100 Gossypium hirsutum HOM05D005087 ORTHO05D006427 3.9e-32 141.7 117 63.2
Nn7g36293 Nelumbo nucifera HOM05D005087 ORTHO05D006427 5.1e-32 141.4 117 62.4
PGR031G1517 Punica granatum HOM05D005087 ORTHO05D006427 5.1e-32 141.4 117 63.2
Aa31LG11G13680 Aethionema arabicum HOM05D005087 ORTHO05D006427 6.6e-32 141.0 117 60.7
A03p07470 Brassica napus HOM05D005087 ORTHO05D006427 6.6e-32 141.0 117 60.7
C03p08670 Brassica napus HOM05D005087 ORTHO05D006427 6.6e-32 141.0 117 60.7
BolC3t13367H Brassica oleracea HOM05D005087 ORTHO05D006427 6.6e-32 141.0 117 60.7
BraA03t10076Z Brassica rapa HOM05D005087 ORTHO05D006427 6.6e-32 141.0 117 60.7
Cpa.g.sc125.40 Carica papaya HOM05D005087 ORTHO05D006427 6.6e-32 141.0 117 62.4
Phvul.002G285500 Phaseolus vulgaris HOM05D005087 ORTHO05D006427 6.6e-32 141.0 117 59.8
Potri.001G262600 Populus trichocarpa HOM05D005087 ORTHO05D006427 6.6e-32 141.0 117 61.5
TPR.G14572 Trifolium pratense HOM05D005087 ORTHO05D006427 6.6e-32 141.0 117 59.0
Carub.0006s1411 Capsella rubella HOM05D005087 ORTHO05D006427 8.7e-32 140.6 117 59.8
Sabra16G0161000 Salix brachista HOM05D005087 ORTHO05D006427 8.7e-32 140.6 117 62.4
AT5G15920 Arabidopsis thaliana HOM05D005087 ORTHO05D006427 1.1e-31 140.2 117 59.0
Cfa022636 Carpinus fangiana HOM05D005087 ORTHO05D006427 1.5e-31 139.8 117 60.7
Ca_14518_v3 Cicer arietinum L. HOM05D005087 ORTHO05D006427 1.5e-31 139.8 117 59.8
Manes.10G136400 Manihot esculenta HOM05D005087 ORTHO05D006427 1.9e-31 139.4 117 59.8
PSO210G7144 Papaver somniferum HOM05D005087 ORTHO05D006427 1.9e-31 139.4 118 60.2
Sed0026614 Sechium edule HOM05D005087 ORTHO05D006427 1.9e-31 139.4 117 61.5
Lj3g0015731 Lotus japonicus HOM05D005087 ORTHO05D006427 2.5e-31 139.0 117 59.8
Lalb_Chr04g0263871 Lupinus albus HOM05D005087 ORTHO05D006427 2.5e-31 139.0 117 60.7
ATR0626G229 Amborella trichopoda HOM05D005087 ORTHO05D006427 3.3e-31 138.7 117 59.0
CiPaw.14G002700 Carya illinoinensis HOM05D005087 ORTHO05D006427 3.3e-31 138.7 117 59.8
Aqoxy1G00327 Aquilegia oxysepala HOM05D005087 ORTHO05D006427 4.3e-31 138.3 117 59.0
Haze_03133 Corylus avellana HOM05D005087 ORTHO05D006427 4.3e-31 138.3 117 60.7
Haze_03136 Corylus avellana HOM05D005087 ORTHO05D006427 4.3e-31 138.3 117 60.7
AL6G26800 Arabidopsis lyrata HOM05D005087 ORTHO05D006427 5.6e-31 137.9 117 59.0
Nitab4.5_0000707g0070 Nicotiana tabacum HOM05D005087 ORTHO05D006427 5.6e-31 137.9 115 63.5
Prupe.2G022000 Prunus persica HOM05D005087 ORTHO05D006427 5.6e-31 137.9 117 58.1
RcHm_v2.0_Chr1g0317911 Rosa chinensis HOM05D005087 ORTHO05D006427 5.6e-31 137.9 117 59.8
Thecc.05G218700 Theobroma cacao HOM05D005087 ORTHO05D006427 5.6e-31 137.9 117 61.5
CARHR197390 Cardamine hirsuta HOM05D005087 ORTHO05D006427 7.4e-31 137.5 117 59.8
FvH4_7g01640 Fragaria vesca HOM05D005087 ORTHO05D006427 1.3e-30 136.7 117 58.1
Sc10g0000340 Simmondsia chinensis HOM05D005087 ORTHO05D006427 2.8e-30 135.6 117 59.8
CDE09G1121 Ceratophyllum demersum HOM05D005087 ORTHO05D006427 4.8e-30 134.8 117 58.1
Lj3g0013327 Lotus japonicus HOM05D005087 ORTHO05D006427 4.8e-30 134.8 117 59.8
Hund09863 Selenicereus undatus HOM05D005087 ORTHO05D006427 1.1e-29 133.7 117 59.8
FAN03G0563 Fragaria x ananassa HOM05D005087 ORTHO05D006427 1.4e-29 133.3 117 56.4
SEGI_29436 Sequoiadendron giganteum HOM05D005087 ORTHO05D006427 1.4e-29 133.3 117 59.8
TWI09G0473 Tripterygium wilfordii HOM05D005087 ORTHO05D006427 3.1e-29 132.1 117 57.3
CANSAT80G0443 Cannabis sativa HOM05D005087 ORTHO05D006427 6.9e-29 131.0 117 57.3
THA.LOC104819098 Tarenaya hassleriana HOM05D005087 ORTHO05D006427 9.0e-29 130.6 117 56.4
Glyma.20G198300 Glycine max HOM05D005087 ORTHO05D006427 1.2e-28 130.2 117 56.4
EL10Ac2g04365 Beta vulgaris HOM05D005087 ORTHO05D006427 3.4e-28 128.6 117 58.1
Medtr5g036330 Medicago truncatula HOM05D005087 ORTHO05D006427 5.8e-28 127.9 117 53.8
SEGI_04619 Sequoiadendron giganteum HOM05D005087 ORTHO05D006427 9.9e-28 127.1 124 54.0
AUR62023092 Chenopodium quinoa HOM05D005087 ORTHO05D006427 1.3e-27 126.7 117 57.3
FAN10G1149 Fragaria x ananassa HOM05D005087 ORTHO05D006427 1.3e-27 126.7 129 51.9
unitig_22.g5432 Utricularia gibba HOM05D005087 ORTHO05D006427 1.3e-27 126.7 95 68.4
FAN06G3789 Fragaria x ananassa HOM05D005087 ORTHO05D006427 2.2e-27 125.9 129 51.9
AUR62009415 Chenopodium quinoa HOM05D005087 ORTHO05D006427 2.9e-27 125.6 117 57.3
arahy.Tifrunner.gnm1.ann1.1A5L99 Arachis hypogaea HOM05D005087 ORTHO05D006427 8.4e-27 124.0 117 54.7
SHI04084 Sapria himalayana HOM05D005087 ORTHO05D006427 1.9e-26 122.9 113 54.9
Os05g0596600 Oryza sativa ssp. japonica HOM05D005087 ORTHO05D006427 7.1e-26 120.9 117 53.8
arahy.Tifrunner.gnm1.ann1.JJ1LEU Arachis hypogaea HOM05D005087 ORTHO05D006427 2.3e-24 115.9 130 49.2
ClCG09G004390 Citrullus lanatus HOM05D005087 ORTHO05D006427 3.9e-24 115.2 117 53.0
Pp3c24_4940 Physcomitrium patens HOM05D005087 ORTHO05D006427 5.1e-24 114.8 117 51.3
SMO143G0265 Selaginella moellendorffii HOM05D005087 ORTHO05D006427 5.6e-23 111.3 117 48.7
Mapoly0007s0066 Marchantia polymorpha HOM05D005087 ORTHO05D006427 2.1e-22 109.4 117 50.4
CBR_g88572 Chara braunii HOM05D005087 ORTHO05D000002 3.7e-22 108.6 117 49.6
Psat6g018320 Pisum sativum HOM05D005087 ORTHO05D006427 2.9e-19 99.0 117 47.0
Actinidia21540 Actinidia chinensis HOM05D005087 ORTHO05D006427 1.8e-16 89.7 60 70.0
Medtr5g036370 Medicago truncatula HOM05D005087 ORTHO05D006427 1.1e-15 87.0 76 55.3
AagrBONN_evm.TU.Sc2ySwM_344.2054 Anthoceros agrestis HOM05D005087 ORTHO05D006427 3.3e-15 85.5 98 48.0
DCAR_029700 Daucus carota HOM05D005087 ORTHO05D006427 5.7e-15 84.7 89 50.6
PSO384G4905 Papaver somniferum HOM05D000635 ORTHO05D000488 2.1e-14 82.8 69 60.9
Actinidia21541 Actinidia chinensis HOM05D005087 ORTHO05D006427 2.2e-11 72.8 45 75.6
Cre10.g440200 Chlamydomonas reinhardtii HOM05D005087 ORTHO05D006427 5.0e-11 71.6 113 34.5
PSO384G1020 Papaver somniferum HOM05D005087 ORTHO05D006427 3.2e-10 68.9 48 68.8
HPP92_016894 Vanilla planifolia HOM05D005087 ORTHO05D006427 1.6e-09 66.6 65 52.3
PRCOL_00002930 Prasinoderma coloniale HOM05D005087 ORTHO05D006427 1.1e-07 60.5 100 32.0


User provided reference genes

Program Settings