Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17243 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 9.1e-74 280.0 130 100.0
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 2.4e-21 105.9 125 51.2
Rhsim12G0187900 Rhododendron simsii HOM05D000537 ORTHO05D000415 3.8e-19 98.6 125 47.2
CSS0004106 Camellia sinensis var. sinensis HOM05D000537 ORTHO05D000415 4.6e-17 91.7 124 40.3
CSS0013018 Camellia sinensis var. sinensis HOM05D000537 ORTHO05D000415 4.6e-17 91.7 124 40.3
Oeu009789.1 Olea europaea HOM05D000537 ORTHO05D000415 8.1e-14 80.9 125 37.6
Manes.11G065100 Manihot esculenta HOM05D000537 ORTHO05D000415 4.4e-12 75.1 124 37.1
TAR625G0369 Trochodendron aralioides HOM05D000537 ORTHO05D000415 5.8e-12 74.7 124 37.1
Manes.04G103800 Manihot esculenta HOM05D000537 ORTHO05D000415 9.9e-12 73.9 125 36.8
TAR636G2515 Trochodendron aralioides HOM05D000537 ORTHO05D000415 2.2e-11 72.8 124 36.3
Dinv23294 Davidia involucrata HOM05D000537 ORTHO05D000415 3.8e-11 72.0 125 35.2
Gohir.D05G120900 Gossypium hirsutum HOM05D000537 ORTHO05D000415 3.8e-11 72.0 124 36.3
Gorai.009G124400 Gossypium raimondii HOM05D000537 ORTHO05D000415 3.8e-11 72.0 124 36.3
SalBow7G0417 Salvia bowleyana HOM05D000537 ORTHO05D000415 3.8e-11 72.0 124 36.3
SHI11249 Sapria himalayana HOM05D000537 ORTHO05D000415 1.1e-10 70.5 135 34.8
Oeu010085.1 Olea europaea HOM05D000537 ORTHO05D000415 1.4e-10 70.1 124 35.5
Thecc.06G039800 Theobroma cacao HOM05D000537 ORTHO05D000415 1.4e-10 70.1 125 34.4
Atru.chr3.3928 Acer truncatum HOM05D000537 ORTHO05D000415 2.4e-10 69.3 124 33.9
Gohir.A05G119900 Gossypium hirsutum HOM05D000537 ORTHO05D000415 3.2e-10 68.9 124 35.5
RcHm_v2.0_Chr2g0133201 Rosa chinensis HOM05D000537 ORTHO05D000415 3.2e-10 68.9 125 34.4
Atru.chr3.3857 Acer truncatum HOM05D000537 ORTHO05D000415 5.4e-10 68.2 124 33.1
MSTRG.22790 Avicennia marina HOM05D000537 ORTHO05D000415 5.4e-10 68.2 124 33.9
CAN.G407.54 Capsicum annuum HOM05D000537 ORTHO05D000415 5.4e-10 68.2 124 33.1
RcHm_v2.0_Chr2g0133161 Rosa chinensis HOM05D000537 ORTHO05D000415 5.4e-10 68.2 125 33.6
Peaxi162Scf00835g00112 Petunia axillaris HOM05D000537 ORTHO05D000415 7.1e-10 67.8 124 33.9
Aqoxy7G01982 Aquilegia oxysepala HOM05D000537 ORTHO05D000415 9.3e-10 67.4 121 34.7
Migut.I00705 Erythranthe guttata HOM05D000537 ORTHO05D000415 9.3e-10 67.4 125 32.8
Migut.I00718 Erythranthe guttata HOM05D000537 ORTHO05D000415 9.3e-10 67.4 125 32.8
CiPaw.13G093400 Carya illinoinensis HOM05D000537 ORTHO05D000415 3.5e-09 65.5 124 33.1
ClCG09G009680 Citrullus lanatus HOM05D000537 ORTHO05D000415 3.5e-09 65.5 124 33.1
Peaxi162Scf00332g00429 Petunia axillaris HOM05D000537 ORTHO05D000415 4.6e-09 65.1 124 32.3
TWI75G1439 Tripterygium wilfordii HOM05D000537 ORTHO05D000415 4.6e-09 65.1 121 33.1
QL05p058938 Quercus lobata HOM05D000537 ORTHO05D000415 6.0e-09 64.7 124 34.7
MELO3C018160.2 Cucumis melo HOM05D000537 ORTHO05D000415 7.8e-09 64.3 124 32.3
MELO3C023675.2 Cucumis melo HOM05D000537 ORTHO05D000415 7.8e-09 64.3 124 32.3
CsaV3_7G025070 Cucumis sativus L. HOM05D000537 ORTHO05D000415 7.8e-09 64.3 124 32.3
Hma1.2p1_0109F.1_g052340 Hydrangea macrophylla HOM05D000537 ORTHO05D000415 7.8e-09 64.3 125 33.6
PGSC0003DMG402014189 Solanum tuberosum HOM05D000537 ORTHO05D000415 1.0e-08 63.9 124 31.5
SGA_v2.0_scaffold96G28928 Striga asiatica HOM05D000537 ORTHO05D000415 1.0e-08 63.9 124 33.1
Solyc03g117040.3 Solanum lycopersicum HOM05D000537 ORTHO05D000415 1.3e-08 63.5 124 31.5
Sopen03g035940 Solanum pennellii HOM05D000537 ORTHO05D000415 1.3e-08 63.5 124 31.5
CsaV3_1G034300 Cucumis sativus L. HOM05D000046 ORTHO05D000195 1.7e-08 63.2 125 30.4
Potri.010G184800 Populus trichocarpa HOM05D000537 ORTHO05D000415 2.3e-08 62.8 125 29.6
CANSAT56G1573 Cannabis sativa HOM05D000537 ORTHO05D000415 3.0e-08 62.4 124 33.1
ClCG03G001460 Citrullus lanatus HOM05D000537 ORTHO05D000415 3.0e-08 62.4 125 31.2
Lsat_1_v5_gn_1_32080 Lactuca sativa HOM05D000537 ORTHO05D000415 3.0e-08 62.4 124 29.8
Sed0000180 Sechium edule HOM05D000537 ORTHO05D000415 3.0e-08 62.4 124 31.5
TWI12G1407 Tripterygium wilfordii HOM05D000537 ORTHO05D000415 3.0e-08 62.4 124 35.5
GSVIVG01010892001 Vitis vinifera HOM05D000537 ORTHO05D000415 3.0e-08 62.4 124 33.9
Ah.10g037200 Amaranthus hybridus HOM05D000537 ORTHO05D000415 3.9e-08 62.0 124 30.6
Nitab4.5_0001340g0080 Nicotiana tabacum HOM05D000537 ORTHO05D000415 3.9e-08 62.0 124 31.5
Sc10g0008240 Simmondsia chinensis HOM05D000537 ORTHO05D000415 3.9e-08 62.0 119 32.8
Sabra10G0142100 Salix brachista HOM05D000537 ORTHO05D000415 5.1e-08 61.6 125 29.6
Atru.chr3.3935 Acer truncatum HOM05D000537 ORTHO05D000415 6.6e-08 61.2 124 34.7
Manes.07G117100 Manihot esculenta HOM05D000537 ORTHO05D000415 6.6e-08 61.2 124 29.0
Nitab4.5_0001271g0080 Nicotiana tabacum HOM05D000537 ORTHO05D000415 6.6e-08 61.2 124 30.6
TWI18G0140 Tripterygium wilfordii HOM05D000537 ORTHO05D000415 6.6e-08 61.2 124 34.7
FAN09G3969 Fragaria x ananassa HOM05D000537 ORTHO05D000415 8.7e-08 60.8 124 30.6
Gohir.D06G172350 Gossypium hirsutum HOM05D000537 ORTHO05D000415 8.7e-08 60.8 124 30.6
Gorai.010G201300 Gossypium raimondii HOM05D000537 ORTHO05D000415 8.7e-08 60.8 124 30.6
HanXRQChr16g0522001 Helianthus annuus HOM05D000537 ORTHO05D000415 8.7e-08 60.8 126 29.4
Nitab4.5_0001454g0140 Nicotiana tabacum HOM05D000537 ORTHO05D000415 8.7e-08 60.8 124 31.5
Cfa011512 Carpinus fangiana HOM05D000537 ORTHO05D000415 1.1e-07 60.5 124 29.8
FAN05G0028 Fragaria x ananassa HOM05D000537 ORTHO05D000415 1.1e-07 60.5 124 30.6
Gohir.A06G166800 Gossypium hirsutum HOM05D000537 ORTHO05D000415 1.1e-07 60.5 124 30.6
Cpa.g.sc10.88 Carica papaya HOM05D000537 ORTHO05D000415 1.5e-07 60.1 124 34.7
Cfa005480 Carpinus fangiana HOM05D000537 ORTHO05D000415 1.9e-07 59.7 124 32.3
MELO3C020627.2 Cucumis melo HOM05D000537 ORTHO05D000415 1.9e-07 59.7 125 29.6
TAR623G1224 Trochodendron aralioides HOM05D000537 ORTHO05D000415 1.9e-07 59.7 124 29.0
Dinv04172 Davidia involucrata HOM05D000537 ORTHO05D000415 2.5e-07 59.3 119 31.9
FvH4_6g28780 Fragaria vesca HOM05D000537 ORTHO05D000415 2.5e-07 59.3 124 30.6
FAN14G0095 Fragaria x ananassa HOM05D000537 ORTHO05D000415 2.5e-07 59.3 124 30.6
Nitab4.5_0012768g0020 Nicotiana tabacum HOM05D000537 ORTHO05D000415 2.5e-07 59.3 124 31.5
Phvul.003G281400 Phaseolus vulgaris HOM05D000537 ORTHO05D000415 2.5e-07 59.3 124 30.6
TPR.G3474 Trifolium pratense HOM05D000537 ORTHO05D000415 2.5e-07 59.3 124 31.5
unitig_736.g22804 Utricularia gibba HOM05D000537 ORTHO05D000776 2.5e-07 59.3 124 29.8
Atru.chr6.24 Acer truncatum HOM05D000537 ORTHO05D000415 3.3e-07 58.9 124 33.9
Ciclev10025142m.g Citrus clementina HOM05D000537 ORTHO05D000415 3.3e-07 58.9 124 35.5
QL11p033094 Quercus lobata HOM05D000537 ORTHO05D000415 3.3e-07 58.9 124 32.3
Hund09473 Selenicereus undatus HOM05D000537 ORTHO05D000415 3.3e-07 58.9 124 33.9
GSVIVG01010889001 Vitis vinifera HOM05D000537 ORTHO05D000415 3.3e-07 58.9 124 32.3
Zm00001eb125620 Zea mays HOM05D000537 ORTHO05D000415 3.3e-07 58.9 124 31.5
CANSAT56G1542 Cannabis sativa HOM05D000537 ORTHO05D000415 4.3e-07 58.5 124 29.8
CAN.G1013.30 Capsicum annuum HOM05D000537 ORTHO05D000415 4.3e-07 58.5 124 32.3
Ca_05889_v3 Cicer arietinum L. HOM05D000537 ORTHO05D000415 4.3e-07 58.5 118 33.9
Ciclev10030937m.g Citrus clementina HOM05D000537 ORTHO05D000415 4.3e-07 58.5 124 30.6
Dinv26027 Davidia involucrata HOM05D000537 ORTHO05D000415 4.3e-07 58.5 119 31.9
Gohir.A05G349100 Gossypium hirsutum HOM05D000537 ORTHO05D000415 4.3e-07 58.5 124 28.2
LjContig00141g0012250 Lotus japonicus HOM05D000537 ORTHO05D000415 4.3e-07 58.5 125 30.4
QL08p059601 Quercus lobata HOM05D000537 ORTHO05D000415 4.3e-07 58.5 124 30.6
arahy.Tifrunner.gnm1.ann1.QWDB2Q Arachis hypogaea HOM05D000537 ORTHO05D000415 5.6e-07 58.2 124 30.6
arahy.Tifrunner.gnm1.ann1.U4IPB2 Arachis hypogaea HOM05D000537 ORTHO05D000415 5.6e-07 58.2 124 30.6
CSS0036686 Camellia sinensis var. sinensis HOM05D000537 ORTHO05D000415 5.6e-07 58.2 124 29.8
CiPaw.02G161400 Carya illinoinensis HOM05D000537 ORTHO05D000415 5.6e-07 58.2 124 29.8
AUR62008109 Chenopodium quinoa HOM05D000537 ORTHO05D000415 5.6e-07 58.2 124 32.3
AUR62028687 Chenopodium quinoa HOM05D000537 ORTHO05D000415 5.6e-07 58.2 125 31.2
HanXRQChr01g0019461 Helianthus annuus HOM05D000537 ORTHO05D000415 5.6e-07 58.2 124 30.6
Lj1C151T9 Lonicera japonica HOM05D000537 ORTHO05D000415 5.6e-07 58.2 124 29.8
Nn5g28140 Nelumbo nucifera HOM05D000537 ORTHO05D000415 5.6e-07 58.2 115 33.0
Prupe.3G097000 Prunus persica HOM05D000537 ORTHO05D000415 5.6e-07 58.2 124 32.3
Cfa001460 Carpinus fangiana HOM05D000537 ORTHO05D000415 7.3e-07 57.8 124 27.4
CDE03G0514 Ceratophyllum demersum HOM05D000537 ORTHO05D000415 7.3e-07 57.8 124 29.0
Ca_23211_v3 Cicer arietinum L. HOM05D000537 ORTHO05D000415 7.3e-07 57.8 124 30.6
Ca_23221_v3 Cicer arietinum L. HOM05D000537 ORTHO05D000415 7.3e-07 57.8 124 30.6
HanXRQChr02g0049151 Helianthus annuus HOM05D000537 ORTHO05D000415 7.3e-07 57.8 126 29.4
MBI14_g44884_MAGBIO Magnolia biondii HOM05D000537 ORTHO05D000415 7.3e-07 57.8 124 29.8
MD17G1222100 Malus domestica HOM05D000537 ORTHO05D000415 7.3e-07 57.8 124 30.6
Rhsim03G0129800 Rhododendron simsii HOM05D000537 ORTHO05D000415 7.3e-07 57.8 124 25.8
Sed0022378 Sechium edule HOM05D000537 ORTHO05D000415 7.3e-07 57.8 124 29.8
TPR.G34262 Trifolium pratense HOM05D000537 ORTHO05D000415 7.3e-07 57.8 119 32.8
Actinidia34410 Actinidia chinensis HOM05D000537 ORTHO05D000415 9.6e-07 57.4 118 33.1
CSS0022930 Camellia sinensis var. sinensis HOM05D000537 ORTHO05D000415 9.6e-07 57.4 124 29.0
Migut.D02089 Erythranthe guttata HOM05D000537 ORTHO05D000415 9.6e-07 57.4 125 29.6
Glyma.14G068100 Glycine max HOM05D000537 ORTHO05D000415 9.6e-07 57.4 124 31.5
MD07G1200200 Malus domestica HOM05D000537 ORTHO05D000415 9.6e-07 57.4 124 30.6
MD09G1224300 Malus domestica HOM05D000537 ORTHO05D000415 9.6e-07 57.4 124 30.6
CDE04G3239 Ceratophyllum demersum HOM05D000537 ORTHO05D000415 1.3e-06 57.0 124 29.0
DCAR_027514 Daucus carota HOM05D000537 ORTHO05D000415 1.3e-06 57.0 119 33.6
vmacro07181 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.3e-06 57.0 124 28.2
Aqoxy5G03686 Aquilegia oxysepala HOM05D000537 ORTHO05D000415 1.6e-06 56.6 124 29.0
MSTRG.283 Avicennia marina HOM05D000537 ORTHO05D000415 1.6e-06 56.6 124 29.0
Haze_01825 Corylus avellana HOM05D000537 ORTHO05D000415 1.6e-06 56.6 124 31.5
FAN02G0231 Fragaria x ananassa HOM05D000537 ORTHO05D000415 1.6e-06 56.6 124 28.2
Gohir.A13G227232 Gossypium hirsutum HOM05D000537 ORTHO05D000415 1.6e-06 56.6 124 31.5
Lj9C495T3 Lonicera japonica HOM05D000537 ORTHO05D000415 1.6e-06 56.6 124 31.5
CSS0045683 Camellia sinensis var. sinensis HOM05D000537 ORTHO05D000415 2.1e-06 56.2 124 28.2
CANSAT56G0413 Cannabis sativa HOM05D000537 ORTHO05D000415 2.1e-06 56.2 123 30.9
Gorai.012G071000 Gossypium raimondii HOM05D000537 ORTHO05D000415 2.1e-06 56.2 124 27.4
Nn2g12312 Nelumbo nucifera HOM05D000537 ORTHO05D000415 2.1e-06 56.2 124 32.3
PSO210G1996 Papaver somniferum HOM05D000537 ORTHO05D000415 2.1e-06 56.2 122 28.7
ClCG07G003400 Citrullus lanatus HOM05D000537 ORTHO05D000415 2.8e-06 55.8 119 31.1
QL08p019521 Quercus lobata HOM05D000537 ORTHO05D000415 2.8e-06 55.8 124 29.0
TPR.G34301 Trifolium pratense HOM05D000537 ORTHO05D000415 2.8e-06 55.8 124 30.6
TAR369G0579 Trochodendron aralioides HOM05D000537 ORTHO05D000415 2.8e-06 55.8 124 30.6
Prupe.6G075800 Prunus persica HOM05D000537 ORTHO05D000415 3.6e-06 55.5 122 29.5
Hund13771 Selenicereus undatus HOM05D000537 ORTHO05D000415 3.6e-06 55.5 124 29.0
TPR.G6825 Trifolium pratense HOM05D000537 ORTHO05D000415 3.6e-06 55.5 120 30.8
Aqoxy5G04342 Aquilegia oxysepala HOM05D000537 ORTHO05D000415 4.8e-06 55.1 122 28.7
Cc04_g05000 Coffea canephora HOM05D000537 ORTHO05D000415 4.8e-06 55.1 119 29.4
DCAR_001854 Daucus carota HOM05D000537 ORTHO05D000415 4.8e-06 55.1 57 49.1
Dinv23295 Davidia involucrata HOM05D000537 ORTHO05D000415 4.8e-06 55.1 124 30.6
Cfa012700 Carpinus fangiana HOM05D000537 ORTHO05D000415 6.2e-06 54.7 124 29.8
Duzib114G0977 Durio zibethinus HOM05D000537 ORTHO05D000415 6.2e-06 54.7 124 31.5
TAR633G1166 Trochodendron aralioides HOM05D000537 ORTHO05D000415 6.2e-06 54.7 124 29.8
PSO782G5724 Papaver somniferum HOM05D000537 ORTHO05D000415 8.1e-06 54.3 122 30.3


User provided reference genes

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