Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro17002 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 5.6e-75 284.6 197 100.0
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.3e-18 97.4 102 57.8
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 7.2e-14 81.6 100 48.0
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 3.6e-13 79.3 89 53.9
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 8.0e-13 78.2 101 46.5
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 3.0e-12 76.3 95 46.3
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 3.9e-12 75.9 98 40.8
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.5e-11 73.9 99 45.5
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 2.0e-11 73.6 93 43.0
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 2.6e-11 73.2 100 44.0
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 4.4e-11 72.4 89 44.9
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 4.4e-11 72.4 100 45.0
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 1.3e-10 70.9 89 46.1
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 1.7e-10 70.5 100 44.0
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 2.8e-10 69.7 100 43.0
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 4.8e-10 68.9 99 42.4
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 4.8e-10 68.9 97 42.3
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 4.8e-10 68.9 86 46.5
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 4.8e-10 68.9 88 44.3
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 6.3e-10 68.6 97 42.3
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 8.2e-10 68.2 96 45.8
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 8.2e-10 68.2 89 44.9
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 8.2e-10 68.2 97 43.3
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 1.1e-09 67.8 98 42.9
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 2.4e-09 66.6 99 40.4
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.4e-09 66.6 95 42.1
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 3.1e-09 66.2 96 39.6
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 3.1e-09 66.2 88 44.3
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 3.1e-09 66.2 88 44.3
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 3.1e-09 66.2 94 43.6
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 3.1e-09 66.2 90 45.6
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 3.1e-09 66.2 94 42.6
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 4.1e-09 65.9 87 44.8
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 4.1e-09 65.9 94 42.6
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 7.0e-09 65.1 64 53.1
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 7.0e-09 65.1 64 53.1
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 7.0e-09 65.1 88 44.3
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 7.0e-09 65.1 88 44.3
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 9.1e-09 64.7 36 86.1
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 1.2e-08 64.3 90 44.4
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 2.6e-08 63.2 89 44.9
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 3.5e-08 62.8 89 44.9
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 4.5e-08 62.4 89 43.8
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 5.9e-08 62.0 99 42.4
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 5.9e-08 62.0 90 44.4
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 5.9e-08 62.0 89 41.6
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 7.7e-08 61.6 89 42.7
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 7.7e-08 61.6 89 42.7
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 7.7e-08 61.6 89 42.7
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 7.7e-08 61.6 93 41.9
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 1.3e-07 60.8 100 38.0
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 1.7e-07 60.5 94 40.4
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.7e-07 60.5 90 43.3
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 1.7e-07 60.5 92 42.4
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 2.2e-07 60.1 32 87.5
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 2.2e-07 60.1 87 41.4
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 2.9e-07 59.7 87 40.2
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 2.9e-07 59.7 90 42.2
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 3.8e-07 59.3 86 40.7
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 3.8e-07 59.3 89 39.3
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 5.0e-07 58.9 90 42.2
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 6.5e-07 58.5 94 41.5
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 8.5e-07 58.2 88 42.0
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 8.5e-07 58.2 89 38.2
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 1.1e-06 57.8 90 41.1
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 1.5e-06 57.4 88 42.0
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.5e-06 57.4 88 39.8
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 2.5e-06 56.6 97 37.1
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.5e-06 56.6 85 37.6
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 3.2e-06 56.2 75 44.0
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 5.5e-06 55.5 87 42.5
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 5.5e-06 55.5 34 73.5
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 7.2e-06 55.1 87 42.5
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 7.2e-06 55.1 75 44.0
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 9.4e-06 54.7 75 44.0


User provided reference genes

Program Settings