Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 0.0e+00 1544.3 790 100.0
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 0.0e+00 1219.9 792 83.8
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 3.3e-283 978.4 817 65.6
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 6.8e-265 917.5 826 60.4
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 1.2e-264 916.8 817 60.8
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 7.6e-264 914.1 817 60.0
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 1.5e-248 863.2 806 57.6
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 2.6e-248 862.4 823 58.0
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 2.6e-248 862.4 811 57.2
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 2.4e-246 855.9 835 56.5
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 5.4e-246 854.7 817 57.8
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 2.1e-245 852.8 803 57.3
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 4.6e-245 851.7 798 58.0
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 3.9e-244 848.6 803 56.5
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 1.1e-243 847.0 763 58.2
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 2.1e-242 842.8 815 57.1
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 2.8e-242 842.4 797 56.5
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 4.8e-242 841.6 798 56.5
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 3.4e-240 835.5 802 56.9
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 2.2e-239 832.8 821 55.7
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 3.9e-236 822.0 799 55.8
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 5.1e-236 821.6 808 56.2
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 5.1e-236 821.6 801 55.6
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 5.1e-236 821.6 801 55.6
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 5.6e-235 818.1 770 56.6
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 7.4e-235 817.8 754 57.2
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 9.6e-235 817.4 816 54.8
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 1.3e-234 817.0 814 54.4
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 3.7e-234 815.5 796 54.8
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 4.8e-234 815.1 796 56.2
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 1.8e-233 813.1 810 56.0
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 1.8e-233 813.1 804 54.4
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 3.1e-233 812.4 768 55.9
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 4.0e-233 812.0 818 55.1
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 6.9e-233 811.2 816 54.3
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.5e-232 810.1 802 54.9
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 5.8e-232 808.1 773 56.5
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 2.9e-231 805.8 819 52.6
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 2.9e-231 805.8 806 54.2
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 3.8e-231 805.4 776 55.2
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 6.5e-231 804.7 770 56.6
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 8.4e-231 804.3 814 53.1
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 1.4e-230 803.5 760 57.4
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.2e-230 802.4 812 53.4
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 4.2e-230 802.0 775 55.1
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 9.3e-230 800.8 805 54.8
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 1.6e-229 800.0 801 55.2
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.1e-229 799.7 814 52.9
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 6.0e-229 798.1 811 53.1
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 6.0e-229 798.1 767 56.1
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 2.3e-228 796.2 813 55.2
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 3.0e-228 795.8 819 53.1
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 3.0e-228 795.8 806 54.5
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 1.9e-227 793.1 802 53.5
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 7.4e-227 791.2 815 53.7
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 4.8e-226 788.5 768 55.6
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 8.2e-226 787.7 806 53.0
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 1.1e-225 787.3 814 53.9
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 5.3e-225 785.0 792 54.8
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 6.9e-225 784.6 802 55.0
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 9.0e-225 784.3 795 54.1
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.2e-224 783.9 811 52.2
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 1.7e-223 780.0 816 52.9
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 2.2e-223 779.6 817 52.3
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 2.9e-223 779.2 790 55.2
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 2.9e-223 779.2 780 54.9
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 2.9e-223 779.2 801 53.4
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 8.4e-223 777.7 799 52.9
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 1.9e-222 776.5 792 54.8
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 2.7e-221 772.7 774 55.3
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 3.5e-221 772.3 776 55.2
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 6.1e-221 771.5 774 55.7
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 1.0e-220 770.8 775 55.2
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 2.3e-220 769.6 776 54.9
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 3.0e-220 769.2 776 55.0
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 5.1e-220 768.5 775 55.1
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 1.9e-219 766.5 739 54.4
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 4.3e-219 765.4 773 53.7
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 5.7e-219 765.0 749 54.5
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 2.8e-218 762.7 841 52.2
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 4.1e-217 758.8 803 52.3
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 6.9e-217 758.1 810 53.0
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 3.8e-215 752.3 810 52.3
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 6.5e-215 751.5 811 52.7
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 7.2e-214 748.0 659 61.6
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 4.6e-213 745.3 784 53.2
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 6.9e-209 731.5 662 59.1
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 2.0e-208 729.9 663 59.1
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 2.3e-204 716.5 821 50.3
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 7.2e-198 694.9 696 55.9
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 1.8e-196 690.3 757 49.1
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 4.5e-192 675.6 812 48.6
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 4.5e-192 675.6 656 55.0
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 4.7e-181 639.0 786 47.8
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 4.9e-170 602.4 575 58.3
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 3.0e-167 593.2 754 44.4
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 3.4e-139 500.0 553 50.3
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 5.6e-134 482.6 385 61.0
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 1.4e-116 424.9 551 43.4
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.1e-97 362.1 353 54.4
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 1.4e-95 355.1 650 36.5
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 3.6e-88 330.5 695 34.5
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 2.0e-83 314.7 294 55.1
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 2.5e-73 281.2 237 62.0
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 2.3e-71 274.6 316 49.4
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.6e-70 271.2 438 39.7
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.6e-70 271.2 438 39.7
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 5.9e-67 260.0 301 47.5
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 2.8e-56 224.6 684 27.3
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 3.7e-45 187.6 222 47.3
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 1.8e-39 168.7 695 24.7
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 2.8e-32 144.8 249 35.7
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.6e-27 129.0 152 47.4
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.3e-26 125.9 253 34.8
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 3.3e-25 121.3 147 44.9
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 1.3e-18 99.4 147 40.8
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 6.7e-10 70.5 105 41.9
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 3.4e-06 58.2 86 34.9


User provided reference genes

Program Settings