Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16423 Vaccinium macrocarpon HOM05D003955 ORTHO05D004684 0.0e+00 1180.2 611 100.0
Rhsim12G0139700 Rhododendron simsii HOM05D003955 ORTHO05D004684 0.0e+00 1135.9 611 95.3
Hma1.2p1_0669F.1_g200270 Hydrangea macrophylla HOM05D003955 ORTHO05D004684 4.3e-299 1030.8 623 84.9
CSS0005322 Camellia sinensis var. sinensis HOM05D003955 ORTHO05D004684 8.1e-298 1026.5 611 84.8
GSVIVG01008399001 Vitis vinifera HOM05D003955 ORTHO05D004684 1.7e-295 1018.8 611 83.6
TAR374G0009 Trochodendron aralioides HOM05D003955 ORTHO05D004684 8.4e-295 1016.5 611 84.5
TAR622G0688 Trochodendron aralioides HOM05D003955 ORTHO05D004684 1.2e-293 1012.7 611 81.5
Thecc.03G050300 Theobroma cacao HOM05D003955 ORTHO05D004684 4.6e-293 1010.7 611 81.8
Cpa.g.sc3.440 Carica papaya HOM05D003955 ORTHO05D004684 1.1e-291 1006.1 611 83.3
Dinv26502 Davidia involucrata HOM05D003955 ORTHO05D004684 4.3e-291 1004.2 606 86.1
Nitab4.5_0001158g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 5.6e-291 1003.8 623 80.6
Cfa019689 Carpinus fangiana HOM05D003955 ORTHO05D004684 1.6e-290 1002.3 610 84.1
Nitab4.5_0001644g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 1.6e-290 1002.3 634 79.3
MSTRG.9290 Avicennia marina HOM05D003955 ORTHO05D004684 2.8e-290 1001.5 610 78.4
Gorai.007G004500 Gossypium raimondii HOM05D003955 ORTHO05D004684 4.7e-290 1000.7 611 81.3
PGSC0003DMG400005655 Solanum tuberosum HOM05D003955 ORTHO05D004684 8.1e-290 1000.0 611 81.5
Gohir.D11G003500 Gossypium hirsutum HOM05D003955 ORTHO05D004684 1.1e-289 999.6 611 81.2
TWI15G0606 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 6.9e-289 996.9 607 78.3
Sopen03g037980 Solanum pennellii HOM05D003955 ORTHO05D004684 1.5e-288 995.7 611 80.9
CsaV3_1G004220 Cucumis sativus L. HOM05D003955 ORTHO05D004684 2.0e-288 995.3 609 80.3
Migut.D01456 Erythranthe guttata HOM05D003955 ORTHO05D004684 4.4e-288 994.2 611 80.7
Gohir.A11G004000 Gossypium hirsutum HOM05D003955 ORTHO05D004684 9.9e-288 993.0 608 81.6
Solyc03g119090.3 Solanum lycopersicum HOM05D003955 ORTHO05D004684 9.9e-288 993.0 611 80.9
MELO3C017347.2 Cucumis melo HOM05D003955 ORTHO05D004684 1.7e-287 992.3 609 80.5
SGA_v2.0_scaffold25G10972 Striga asiatica HOM05D003955 ORTHO05D004684 4.2e-286 987.6 611 81.2
QL10p027883 Quercus lobata HOM05D003955 ORTHO05D004684 5.4e-286 987.3 610 83.3
Sed0014282 Sechium edule HOM05D003955 ORTHO05D004684 2.7e-285 984.9 609 79.8
Sed0001638 Sechium edule HOM05D003955 ORTHO05D004684 3.5e-285 984.6 609 79.3
Peaxi162Scf00683g00157 Petunia axillaris HOM05D003955 ORTHO05D004684 1.0e-284 983.0 610 82.0
Aqoxy3G04013 Aquilegia oxysepala HOM05D003955 ORTHO05D004684 2.3e-284 981.9 611 81.3
ClCG06G014440 Citrullus lanatus HOM05D003955 ORTHO05D004684 3.0e-284 981.5 601 79.7
Haze_18797 Corylus avellana HOM05D003955 ORTHO05D004684 3.0e-284 981.5 615 82.9
Manes.06G008300 Manihot esculenta HOM05D003955 ORTHO05D004684 3.0e-284 981.5 611 81.5
CANSAT80G2537 Cannabis sativa HOM05D003955 ORTHO05D004684 3.9e-284 981.1 611 80.2
Ciclev10007782m.g Citrus clementina HOM05D003955 ORTHO05D004684 1.3e-282 976.1 611 79.5
Dinv05158 Davidia involucrata HOM05D003955 ORTHO05D004684 1.6e-282 975.7 612 79.6
CiPaw.15G139700 Carya illinoinensis HOM05D003955 ORTHO05D004684 6.2e-282 973.8 610 82.1
Prupe.5G230600 Prunus persica HOM05D003955 ORTHO05D004684 8.1e-282 973.4 611 82.2
Sabra12G0034600 Salix brachista HOM05D003955 ORTHO05D004684 8.1e-282 973.4 624 77.4
PSO782G1387 Papaver somniferum HOM05D003955 ORTHO05D004684 1.4e-281 972.6 611 79.4
COL.COLO4_22318 Corchorus olitorius HOM05D003955 ORTHO05D004684 1.8e-281 972.2 638 77.3
THA.LOC104820357 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 5.3e-281 970.7 608 78.9
Potri.015G041200 Populus trichocarpa HOM05D003955 ORTHO05D004684 6.9e-281 970.3 611 80.5
DCAR_014770 Daucus carota HOM05D003955 ORTHO05D004684 1.2e-280 969.5 610 79.0
MD14G1234400 Malus domestica HOM05D003955 ORTHO05D004684 1.7e-279 965.7 609 80.6
TWI81G0555 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 2.9e-279 964.9 596 77.3
Potri.012G049200 Populus trichocarpa HOM05D003955 ORTHO05D004684 1.1e-278 963.0 611 79.9
PSO063G1948 Papaver somniferum HOM05D003955 ORTHO05D004684 1.9e-278 962.2 611 78.9
RcHm_v2.0_Chr7g0178701 Rosa chinensis HOM05D003955 ORTHO05D004684 4.2e-278 961.1 611 80.7
MD06G1229500 Malus domestica HOM05D003955 ORTHO05D004684 5.4e-278 960.7 609 80.5
HanXRQChr10g0314661 Helianthus annuus HOM05D003955 ORTHO05D004684 9.3e-278 959.9 611 78.1
FAN18G0775 Fragaria x ananassa HOM05D003955 ORTHO05D004684 3.9e-276 954.5 611 80.5
VMungo0251G3447 Vigna mungo HOM05D003955 ORTHO05D004684 5.1e-276 954.1 607 77.6
Lj4g0027787 Lotus japonicus HOM05D003955 ORTHO05D004684 8.7e-276 953.4 606 77.1
Glyma.05G243900 Glycine max HOM05D003955 ORTHO05D004684 2.5e-275 951.8 609 77.2
PGR083G2578 Punica granatum HOM05D003955 ORTHO05D004684 2.5e-275 951.8 610 78.9
Eucgr.K02263 Eucalyptus grandis HOM05D003955 ORTHO05D004684 4.3e-275 951.0 613 79.4
Glyma.08G051900 Glycine max HOM05D003955 ORTHO05D004684 1.6e-274 949.1 607 77.1
Sabra15G0055900 Salix brachista HOM05D003955 ORTHO05D004684 2.1e-274 948.7 662 74.5
Phvul.002G327600 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 4.8e-274 947.6 607 79.2
FvH4_5g17110 Fragaria vesca HOM05D003955 ORTHO05D004684 6.2e-274 947.2 611 80.0
Lj2A556T29 Lonicera japonica HOM05D003955 ORTHO05D004684 6.2e-274 947.2 609 79.6
FAN04G3226 Fragaria x ananassa HOM05D003955 ORTHO05D004684 2.4e-273 945.3 622 79.3
FAN13G1787 Fragaria x ananassa HOM05D003955 ORTHO05D004684 2.4e-273 945.3 622 79.4
Psat7g000120 Pisum sativum HOM05D003955 ORTHO05D004684 3.1e-273 944.9 607 76.9
FAN08G2535 Fragaria x ananassa HOM05D003955 ORTHO05D004684 5.3e-273 944.1 620 79.5
Sp3g16180 Schrenkiella parvula HOM05D003955 ORTHO05D004684 5.3e-273 944.1 610 77.2
Sabra15G0063600 Salix brachista HOM05D003955 ORTHO05D004684 1.2e-272 943.0 617 78.8
CARHR093380 Cardamine hirsuta HOM05D003955 ORTHO05D004684 5.8e-272 940.6 610 76.6
Lsat_1_v5_gn_5_91461 Lactuca sativa HOM05D003955 ORTHO05D004684 5.8e-272 940.6 612 77.0
Thhalv10020321m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 1.3e-271 939.5 610 77.4
Lalb_Chr05g0221841 Lupinus albus HOM05D003955 ORTHO05D004684 2.2e-271 938.7 607 76.6
COL.COLO4_20464 Corchorus olitorius HOM05D003955 ORTHO05D004684 2.9e-271 938.3 611 74.1
Medtr8g106820 Medicago truncatula HOM05D003955 ORTHO05D004684 2.9e-271 938.3 607 77.4
Atru.chr11.420 Acer truncatum HOM05D003955 ORTHO05D004684 4.9e-271 937.6 611 76.8
Aa31LG8G4920 Aethionema arabicum HOM05D003955 ORTHO05D004684 1.4e-270 936.0 609 75.7
Ca_17215_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 3.2e-270 934.9 605 77.4
Ca_17217_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 3.2e-270 934.9 605 77.4
Oeu061232.2 Olea europaea HOM05D003955 ORTHO05D004684 2.1e-269 932.2 689 68.9
Gorai.002G180400 Gossypium raimondii HOM05D003955 ORTHO05D004684 7.9e-269 930.2 611 72.5
Actinidia18907 Actinidia chinensis HOM05D003955 ORTHO05D004684 3.9e-268 927.9 610 78.4
DCAR_023230 Daucus carota HOM05D003955 ORTHO05D004684 1.1e-267 926.4 611 74.5
ATR0686G116 Amborella trichopoda HOM05D003955 ORTHO05D004684 1.5e-267 926.0 612 75.3
CDE04G0774 Ceratophyllum demersum HOM05D003955 ORTHO05D004684 4.3e-267 924.5 609 77.2
Carub.0003s1778 Capsella rubella HOM05D003955 ORTHO05D004684 5.6e-267 924.1 610 75.6
Manes.15G126700 Manihot esculenta HOM05D003955 ORTHO05D004684 9.6e-267 923.3 611 76.4
ECA234G1883 Erigeron canadensis HOM05D003955 ORTHO05D004684 3.1e-265 918.3 594 77.1
AL3G31220 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 2.6e-264 915.2 610 75.1
Lj6A27G8 Lonicera japonica HOM05D003955 ORTHO05D004684 7.6e-264 913.7 691 70.8
AT3G18060 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 1.7e-263 912.5 610 74.8
Ciclev10014635m.g Citrus clementina HOM05D003955 ORTHO05D004684 8.4e-263 910.2 609 74.2
BolC5t33552H Brassica oleracea HOM05D003955 ORTHO05D004684 1.9e-262 909.1 609 74.7
AUR62014196 Chenopodium quinoa HOM05D003955 ORTHO05D004684 2.5e-262 908.7 613 71.9
C05p48110 Brassica napus HOM05D003955 ORTHO05D004684 1.2e-261 906.4 609 74.4
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 2.7e-261 905.2 605 74.7
Sc11g0004100 Simmondsia chinensis HOM05D003955 ORTHO05D004684 4.6e-261 904.4 611 74.1
A05p31710 Brassica napus HOM05D003955 ORTHO05D004684 6.0e-261 904.0 609 74.2
BraA05t22004Z Brassica rapa HOM05D003955 ORTHO05D004684 6.0e-261 904.0 609 74.2
AUR62041238 Chenopodium quinoa HOM05D003955 ORTHO05D004684 6.0e-261 904.0 613 73.6
Lj5g0018825 Lotus japonicus HOM05D003955 ORTHO05D004684 2.3e-260 902.1 612 74.0
Glyma.20G126400 Glycine max HOM05D003955 ORTHO05D004684 1.9e-259 899.0 612 73.4
Cpa.g.sc211.2 Carica papaya HOM05D003955 ORTHO05D004684 9.7e-259 896.7 612 74.8
Medtr1g107560 Medicago truncatula HOM05D003955 ORTHO05D004684 2.2e-258 895.6 611 70.2
arahy.Tifrunner.gnm1.ann1.I5E1T8 Arachis hypogaea HOM05D003955 ORTHO05D004684 3.1e-257 891.7 611 72.5
Nn4g24112 Nelumbo nucifera HOM05D003955 ORTHO05D004684 2.9e-255 885.2 565 79.5
arahy.Tifrunner.gnm1.ann1.MW1RK6 Arachis hypogaea HOM05D003955 ORTHO05D004684 9.3e-254 880.2 624 70.8
VMungo0720G1874 Vigna mungo HOM05D003955 ORTHO05D004684 9.3e-254 880.2 612 72.7
TPR.G13862 Trifolium pratense HOM05D003955 ORTHO05D004684 6.1e-253 877.5 611 71.2
Psat6g220280 Pisum sativum HOM05D003955 ORTHO05D004684 3.9e-252 874.8 611 72.0
Os01g0125800 Oryza sativa ssp. japonica HOM05D003955 ORTHO05D004684 5.1e-252 874.4 612 69.3
Hund24990 Selenicereus undatus HOM05D003955 ORTHO05D004684 1.1e-249 866.7 683 64.3
Phvul.007G038100 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 3.1e-249 865.1 612 71.6
Zm00001eb334960 Zea mays HOM05D003955 ORTHO05D004684 6.9e-249 864.0 608 68.9
Sp2g12780 Schrenkiella parvula HOM05D003955 ORTHO05D004684 9.1e-249 863.6 614 73.0
Thhalv10000821m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 3.8e-247 858.2 614 73.0
Zm00001eb125700 Zea mays HOM05D003955 ORTHO05D004684 1.4e-246 856.3 612 68.3
AL5G10290 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 2.5e-246 855.5 614 71.0
Carub.0005s0030 Capsella rubella HOM05D003955 ORTHO05D004684 4.2e-246 854.7 614 70.5
EL10Ac6g14239 Beta vulgaris HOM05D003955 ORTHO05D004684 5.5e-246 854.4 598 71.4
Aa31LG2G8590 Aethionema arabicum HOM05D003955 ORTHO05D004684 7.2e-246 854.0 646 68.1
C09p30050 Brassica napus HOM05D003955 ORTHO05D004684 1.2e-245 853.2 619 70.8
BolC9t55869H Brassica oleracea HOM05D003955 ORTHO05D004684 1.2e-245 853.2 619 70.8
CARHR143850 Cardamine hirsuta HOM05D003955 ORTHO05D004684 1.6e-245 852.8 614 70.5
BcaC04g21593 Brassica carinata HOM05D003955 ORTHO05D004684 2.7e-245 852.0 614 70.8
A09p23310 Brassica napus HOM05D003955 ORTHO05D004684 1.0e-244 850.1 619 70.6
BraA09t37932Z Brassica rapa HOM05D003955 ORTHO05D004684 3.0e-244 848.6 619 70.3
BcaB07g30749 Brassica carinata HOM05D003955 ORTHO05D004684 8.8e-244 847.0 614 71.2
Ah.03g138590 Amaranthus hybridus HOM05D003955 ORTHO05D004684 3.7e-242 841.6 606 70.0
AT2G01330 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 2.6e-240 835.5 614 69.7
THA.LOC104823875 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 7.7e-240 833.9 612 69.9
Gohir.A01G153300 Gossypium hirsutum HOM05D003955 ORTHO05D004684 2.0e-232 809.3 525 76.4
Gohir.D01G099700 Gossypium hirsutum HOM05D003955 ORTHO05D004684 2.6e-232 808.9 525 76.4
Actinidia35113 Actinidia chinensis HOM05D003955 ORTHO05D004684 4.3e-206 721.8 415 87.7
TPR.G12969 Trifolium pratense HOM05D003955 ORTHO05D004684 1.0e-204 717.2 472 78.6
Hund20686 Selenicereus undatus HOM05D003955 ORTHO05D004684 8.9e-204 714.1 478 74.3
Pp3c3_9960 Physcomitrium patens HOM05D003955 ORTHO05D004684 1.8e-201 706.4 609 58.0
Mapoly0025s0096 Marchantia polymorpha HOM05D003955 ORTHO05D004684 1.8e-196 689.9 610 54.6
Cc04_g06570 Coffea canephora HOM05D003955 ORTHO05D004684 7.8e-184 647.9 394 83.5
Thecc.02G279800 Theobroma cacao HOM05D003955 ORTHO05D004684 5.4e-177 625.2 425 76.5
SMO298G0047 Selaginella moellendorffii HOM05D003955 ORTHO05D004684 4.7e-173 612.1 609 51.1
AagrBONN_evm.TU.Sc2ySwM_340.157 Anthoceros agrestis HOM05D003955 ORTHO05D004684 1.6e-168 597.0 612 53.9
Lalb_Chr06g0165551 Lupinus albus HOM05D003955 ORTHO05D004684 1.9e-158 563.5 427 67.7
HPP92_000152 Vanilla planifolia HOM05D003955 ORTHO05D004684 4.5e-147 525.8 481 58.0
Oeu031790.1 Olea europaea HOM05D003955 ORTHO05D004684 2.6e-131 473.4 354 66.4
BolC5t33521H Brassica oleracea HOM05D003955 ORTHO05D004684 3.9e-127 459.5 325 68.6
Atru.chr9.1765 Acer truncatum HOM05D003955 ORTHO05D004684 8.5e-122 441.8 283 74.6
SEGI_26510 Sequoiadendron giganteum HOM05D003955 ORTHO05D004684 3.6e-120 436.4 351 61.5
CBR_g51409 Chara braunii HOM05D003955 ORTHO05D004684 1.7e-117 427.6 486 51.0
MCO02G121 Micromonas commoda HOM05D003955 ORTHO05D004684 2.6e-102 377.1 647 36.5
Cc04_g06580 Coffea canephora HOM05D003955 ORTHO05D004684 1.3e-93 348.2 222 78.4
PRCOL_00004882 Prasinoderma coloniale HOM05D003955 ORTHO05D004684 5.4e-92 342.8 632 38.4
Lalb_Chr06g0165541 Lupinus albus HOM05D003955 ORTHO05D004684 2.9e-90 337.0 186 84.9
Haze_27019 Corylus avellana HOM05D003955 ORTHO05D004684 1.3e-82 311.6 488 38.7
Zm00001eb337090 Zea mays HOM05D003955 ORTHO05D004684 4.7e-64 250.0 166 77.7
Zm00001eb396840 Zea mays HOM05D003955 ORTHO05D004684 4.7e-64 250.0 166 77.1
Zm00001eb287030 Zea mays HOM05D003955 ORTHO05D004684 4.4e-62 243.4 164 77.4
Atru.chr9.1764 Acer truncatum HOM05D003955 ORTHO05D004684 2.9e-61 240.7 171 77.2
Zm00001eb076360 Zea mays HOM05D003955 ORTHO05D004684 2.9e-61 240.7 164 76.8
Hund20688 Selenicereus undatus HOM05D003955 ORTHO05D004684 4.8e-56 223.4 132 81.8
Ca_27465_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 6.2e-56 223.0 132 81.8
BcaC05g28709 Brassica carinata HOM05D003955 ORTHO05D004684 9.9e-54 215.7 129 79.8
TPR.G12747 Trifolium pratense HOM05D003955 ORTHO05D004684 2.2e-53 214.5 131 77.9
Oeu031786.1 Olea europaea HOM05D003955 ORTHO05D004684 1.4e-47 195.3 132 75.8
BcaB03g13114 Brassica carinata HOM05D003955 ORTHO05D030800 3.2e-44 184.1 161 57.1
RcHm_v2.0_Chr5g0062751 Rosa chinensis HOM05D003955 ORTHO05D004684 1.6e-35 155.2 101 72.3
Oeu013618.1 Olea europaea HOM05D003955 ORTHO05D004684 5.5e-28 130.2 105 65.7
Zm00001eb221950 Zea mays HOM05D003955 ORTHO05D004684 2.1e-27 128.3 95 62.1
Atru.chr5.1031 Acer truncatum HOM05D003955 ORTHO05D030800 6.7e-26 123.2 81 69.1
BcaB07g32970 Brassica carinata HOM05D003955 ORTHO05D004684 6.9e-23 113.2 166 40.4
Actinidia37891 Actinidia chinensis HOM05D003955 ORTHO05D030800 4.5e-22 110.5 221 35.3
Actinidia37893 Actinidia chinensis HOM05D003955 ORTHO05D004684 8.8e-18 96.3 53 83.0
Zm00001eb369430 Zea mays HOM05D003955 ORTHO05D004684 1.7e-16 92.0 54 74.1
RcHm_v2.0_Chr6g0266701 Rosa chinensis HOM05D003955 ORTHO05D004684 1.3e-13 82.4 72 55.6
RcHm_v2.0_Chr6g0295791 Rosa chinensis HOM05D003955 ORTHO05D004684 6.5e-13 80.1 72 54.2
Zm00001eb265330 Zea mays HOM05D003955 ORTHO05D004684 1.0e-10 72.8 61 57.4
Aa31LG3G10470 Aethionema arabicum HOM05D002303 ORTHO05D007639 3.7e-08 64.3 220 23.2
COL.COLO4_22316 Corchorus olitorius HOM05D003955 ORTHO05D004684 8.2e-08 63.2 49 59.2
Gorai.007G154000 Gossypium raimondii HOM05D000836 ORTHO05D000709 1.1e-07 62.8 344 20.3
FvH4_5g16561 Fragaria vesca HOM05D020439 ORTHO05D035355 4.1e-07 60.8 49 51.0
Phvul.008G125400 Phaseolus vulgaris HOM05D000836 ORTHO05D000709 5.3e-07 60.5 302 21.2
Gohir.D11G143800 Gossypium hirsutum HOM05D000836 ORTHO05D000709 7.0e-07 60.1 344 20.1
Gohir.A11G137400 Gossypium hirsutum HOM05D000836 ORTHO05D000709 1.2e-06 59.3 298 21.8
Prupe.4G196900 Prunus persica HOM05D002303 ORTHO05D007639 1.2e-06 59.3 196 24.5


User provided reference genes

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