Gene: Sopen03g037980

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g037980
  • Transcript Identifier Sopen03g037980.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 72365581-72371184 : negative

Gene Family Information

  • ID HOM05D003955
  • #Genes/#Species 176/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g037980.1

Descriptions

  • Description transducin family protein / WD-40 repeat family protein | FUNCTIONS IN: nucleotide binding | INVOLVED IN: biological_process unknown | LOCATED IN: CUL4 RING ubiquitin ligase complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , Nitrous oxide reductase, N-terminal , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: nucleotide binding
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030042
ISO
PLAZA Integrative Orthologyactin filament depolymerization AT2G01330

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0051015
ISO
PLAZA Integrative Orthologyactin filament binding AT2G01330

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G01330
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G18060
GO:0090406
ISO
PLAZA Integrative Orthologypollen tube AT2G01330

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
35.1 not assigned.annotated