Gene: AT3G18060

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G18060
  • Transcript Identifier AT3G18060.1
  • Gene Type Coding gene
  • Location Chr3 : 6183880-6186788 : positive

Gene Family Information

  • ID HOM05D003955
  • #Genes/#Species 176/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G18060.1
  • uniprot Q9LV35

Descriptions

  • Description transducin family protein / WD-40 repeat family protein
  • Computational description transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Nitrous oxide reductase, N-terminal (InterPro:IPR011045), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleotide binding (TAIR:AT2G01330.2); Has 46825 Blast hits to 21434 proteins in 724 species: Archae - 58; Bacteria - 7760; Metazoa - 18076; Fungi - 9371; Plants - 5681; Viruses - 0; Other Eukaryotes - 5879 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030042
IBA
Gene Ontologyactin filament depolymerization1
GO:0030836
IBA
Gene Ontologypositive regulation of actin filament depolymerization1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051015
IBA
Gene Ontologyactin filament binding1
GO:0003779
IEA
GOA Databaseactin binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex2
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol3
GO:0030864
IBA
Gene Ontologycortical actin cytoskeleton1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR011045 Nitrous oxide reductase, N-terminal
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
35.1 not assigned.annotated