Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro16031 Vaccinium macrocarpon HOM05D003481 ORTHO05D004001 1.5e-246 855.9 495 100.0
vmacro19694 Vaccinium macrocarpon HOM05D003481 ORTHO05D004001 7.7e-97 358.6 441 50.1
vmacro03482 Vaccinium macrocarpon HOM05D003481 ORTHO05D004001 5.0e-72 276.2 194 76.3
vmacro19555 Vaccinium macrocarpon HOM05D001556 ORTHO05D426859 6.8e-29 132.9 176 45.5
Rhsim13G0126800 Rhododendron simsii HOM05D003481 ORTHO05D004001 1.4e-21 108.6 170 43.5
CSS0014471 Camellia sinensis var. sinensis HOM05D003481 ORTHO05D004001 1.9e-18 98.2 170 39.4
MELO3C007016.2 Cucumis melo HOM05D003481 ORTHO05D004001 2.4e-18 97.8 182 40.7
Dinv03119 Davidia involucrata HOM05D003481 ORTHO05D004001 5.4e-18 96.7 170 38.8
Hma1.2p1_0410F.1_g147020 Hydrangea macrophylla HOM05D003481 ORTHO05D004001 9.3e-18 95.9 170 39.4
Actinidia02453 Actinidia chinensis HOM05D003481 ORTHO05D004001 1.6e-17 95.1 170 39.4
MD04G1237800 Malus domestica HOM05D003481 ORTHO05D004001 1.6e-17 95.1 170 39.4
Aa31LG6G2100 Aethionema arabicum HOM05D003481 ORTHO05D004001 2.7e-17 94.4 170 38.8
BcaNung01774 Brassica carinata HOM05D003481 ORTHO05D004001 2.7e-17 94.4 170 38.8
BcaNung02560 Brassica carinata HOM05D003481 ORTHO05D004001 2.7e-17 94.4 170 38.8
BcaNung07226 Brassica carinata HOM05D003481 ORTHO05D004001 2.7e-17 94.4 170 38.8
C07p50430 Brassica napus HOM05D003481 ORTHO05D004001 2.7e-17 94.4 170 38.8
BolC7t45545H Brassica oleracea HOM05D003481 ORTHO05D004001 2.7e-17 94.4 170 38.8
Sp7g18100 Schrenkiella parvula HOM05D003481 ORTHO05D004001 2.7e-17 94.4 170 38.8
BcaC09g51402 Brassica carinata HOM05D003481 ORTHO05D004001 3.5e-17 94.0 170 38.8
C01p13480 Brassica napus HOM05D003481 ORTHO05D004001 3.5e-17 94.0 170 38.8
BolC1t01321H Brassica oleracea HOM05D003481 ORTHO05D004001 3.5e-17 94.0 170 38.8
BraA01t01089Z Brassica rapa HOM05D003481 ORTHO05D004001 3.5e-17 94.0 170 38.8
Thhalv10024300m.g Eutrema salsugineum HOM05D003481 ORTHO05D004001 3.5e-17 94.0 170 38.2
Ciclev10014122m.g Citrus clementina HOM05D003481 ORTHO05D004001 4.6e-17 93.6 170 38.8
Prupe.6G356900 Prunus persica HOM05D003481 ORTHO05D004001 4.6e-17 93.6 170 38.2
vmacro19556 Vaccinium macrocarpon HOM05D003481 ORTHO05D004001 4.6e-17 93.6 54 88.9
AL7G34630 Arabidopsis lyrata HOM05D003481 ORTHO05D004001 6.0e-17 93.2 170 38.2
Lj1A1155G48 Lonicera japonica HOM05D003481 ORTHO05D004001 6.0e-17 93.2 170 38.8
A01p11430 Brassica napus HOM05D003481 ORTHO05D004001 1.0e-16 92.4 170 37.6
A03p51930 Brassica napus HOM05D003481 ORTHO05D004001 1.3e-16 92.0 170 38.2
RcHm_v2.0_Chr3g0448451 Rosa chinensis HOM05D003481 ORTHO05D004001 1.7e-16 91.7 170 38.2
CARHR226290 Cardamine hirsuta HOM05D003481 ORTHO05D004001 2.3e-16 91.3 170 38.2
GSVIVG01037972001 Vitis vinifera HOM05D003481 ORTHO05D004001 2.3e-16 91.3 170 37.1
CiPaw.09G149800 Carya illinoinensis HOM05D003481 ORTHO05D004001 3.9e-16 90.5 170 38.2
FvH4_6g01010 Fragaria vesca HOM05D003481 ORTHO05D004001 3.9e-16 90.5 170 37.6
FAN02G3168 Fragaria x ananassa HOM05D003481 ORTHO05D004001 3.9e-16 90.5 170 37.6
FAN05G1738 Fragaria x ananassa HOM05D003481 ORTHO05D004001 3.9e-16 90.5 170 37.6
FAN09G1882 Fragaria x ananassa HOM05D003481 ORTHO05D004001 3.9e-16 90.5 170 37.6
FAN14G4292 Fragaria x ananassa HOM05D003481 ORTHO05D004001 3.9e-16 90.5 170 37.6
THA.LOC104812894 Tarenaya hassleriana HOM05D003481 ORTHO05D004001 8.7e-16 89.4 170 37.1
Atru.chr8.321 Acer truncatum HOM05D003481 ORTHO05D004001 1.1e-15 89.0 170 37.1
Cfa000748 Carpinus fangiana HOM05D003481 ORTHO05D004001 1.1e-15 89.0 170 37.6
AT4G19490 Arabidopsis thaliana HOM05D003481 ORTHO05D004001 1.5e-15 88.6 170 38.2
Carub.0007s2172 Capsella rubella HOM05D003481 ORTHO05D004001 1.5e-15 88.6 170 35.9
HanXRQChr04g0119881 Helianthus annuus HOM05D003481 ORTHO05D004001 1.5e-15 88.6 170 37.1
CsaV3_6G052920 Cucumis sativus L. HOM05D003481 ORTHO05D004001 3.3e-15 87.4 170 35.9
ClCG01G025690 Citrullus lanatus HOM05D003481 ORTHO05D004001 4.3e-15 87.0 170 35.9
Lsat_1_v5_gn_7_35621 Lactuca sativa HOM05D003481 ORTHO05D004001 4.3e-15 87.0 170 35.9
BraA03t14280Z Brassica rapa HOM05D003481 ORTHO05D004001 7.3e-15 86.3 180 36.7
Hund09767 Selenicereus undatus HOM05D003481 ORTHO05D004001 7.3e-15 86.3 170 37.1
MD12G1256000 Malus domestica HOM05D003481 ORTHO05D004001 9.6e-15 85.9 170 37.6
HanXRQChr06g0183401 Helianthus annuus HOM05D003481 ORTHO05D004001 1.3e-14 85.5 170 34.7
EL10Ac3g05104 Beta vulgaris HOM05D003481 ORTHO05D004001 1.6e-14 85.1 170 35.3
ECA236G0663 Erigeron canadensis HOM05D003481 ORTHO05D004001 1.6e-14 85.1 170 35.3
Duzib235G1444 Durio zibethinus HOM05D003481 ORTHO05D004001 4.8e-14 83.6 170 36.5
Gohir.D10G004400 Gossypium hirsutum HOM05D003481 ORTHO05D004001 4.8e-14 83.6 170 36.5
Gorai.011G004800 Gossypium raimondii HOM05D003481 ORTHO05D004001 4.8e-14 83.6 170 36.5
Duzib160G0577 Durio zibethinus HOM05D003481 ORTHO05D004001 6.2e-14 83.2 170 35.9
Sc13g0010770 Simmondsia chinensis HOM05D003481 ORTHO05D004001 6.2e-14 83.2 170 35.3
Thecc.06G002800 Theobroma cacao HOM05D003481 ORTHO05D004001 6.2e-14 83.2 170 35.9
Sed0003597 Sechium edule HOM05D003481 ORTHO05D004001 1.4e-13 82.0 170 35.3
DCAR_004311 Daucus carota HOM05D003481 ORTHO05D004001 1.8e-13 81.6 170 34.1
Sed0000926 Sechium edule HOM05D003481 ORTHO05D004001 1.8e-13 81.6 170 35.9
MBI19_g43313_MAGBIO Magnolia biondii HOM05D003481 ORTHO05D004001 3.1e-13 80.9 170 34.7
COL.COLO4_26841 Corchorus olitorius HOM05D003481 ORTHO05D004001 4.0e-13 80.5 170 35.3
QL05p065371 Quercus lobata HOM05D003481 ORTHO05D004001 5.3e-13 80.1 170 35.9
QL08p057617 Quercus lobata HOM05D003481 ORTHO05D004001 5.3e-13 80.1 170 35.9
TAR624G0033 Trochodendron aralioides HOM05D003481 ORTHO05D004001 5.3e-13 80.1 169 33.1
TAR626G0933 Trochodendron aralioides HOM05D003481 ORTHO05D004001 6.9e-13 79.7 170 32.9
AUR62005919 Chenopodium quinoa HOM05D003481 ORTHO05D004001 1.5e-12 78.6 170 33.5
Gohir.A10G004400 Gossypium hirsutum HOM05D003481 ORTHO05D004001 3.4e-12 77.4 170 34.7
Nn4g25046 Nelumbo nucifera HOM05D003481 ORTHO05D004001 3.4e-12 77.4 170 34.7
Peaxi162Scf00267g00817 Petunia axillaris HOM05D003481 ORTHO05D004001 4.5e-12 77.0 167 34.1
Ah.13g071230 Amaranthus hybridus HOM05D003481 ORTHO05D004001 5.8e-12 76.6 170 34.1
Nitab4.5_0000378g0100 Nicotiana tabacum HOM05D003481 ORTHO05D004001 5.8e-12 76.6 167 34.1
CAN.G306.7 Capsicum annuum HOM05D003481 ORTHO05D004001 7.6e-12 76.3 167 33.5
Potri.011G154000 Populus trichocarpa HOM05D003481 ORTHO05D004001 7.6e-12 76.3 170 34.1
Nitab4.5_0010415g0040 Nicotiana tabacum HOM05D003481 ORTHO05D004001 9.9e-12 75.9 167 32.9
Sabra11G0145500 Salix brachista HOM05D003481 ORTHO05D004001 1.3e-11 75.5 170 34.1
AUR62028144 Chenopodium quinoa HOM05D003481 ORTHO05D004001 1.7e-11 75.1 170 32.9
Nitab4.5_0025882g0010 Nicotiana tabacum HOM05D003481 ORTHO05D004001 1.7e-11 75.1 167 33.5
TWI15G0246 Tripterygium wilfordii HOM05D003481 ORTHO05D004001 2.2e-11 74.7 173 35.8
Potri.001G442900 Populus trichocarpa HOM05D003481 ORTHO05D004001 2.9e-11 74.3 170 33.5
Nitab4.5_0002444g0030 Nicotiana tabacum HOM05D003481 ORTHO05D004001 3.8e-11 73.9 167 32.3
Sopen02g009430 Solanum pennellii HOM05D003481 ORTHO05D004001 3.8e-11 73.9 167 32.9
Solyc02g030110.2 Solanum lycopersicum HOM05D003481 ORTHO05D004001 4.9e-11 73.6 167 32.9
CAN.G954.8 Capsicum annuum HOM05D003481 ORTHO05D004001 6.4e-11 73.2 167 32.3
Eucgr.K01948 Eucalyptus grandis HOM05D003481 ORTHO05D004001 6.4e-11 73.2 170 32.9
Glyma.15G192300 Glycine max HOM05D003481 ORTHO05D004001 6.4e-11 73.2 170 33.5
TPR.G22668 Trifolium pratense HOM05D003481 ORTHO05D004001 6.4e-11 73.2 170 32.9
Haze_05982 Corylus avellana HOM05D003481 ORTHO05D004001 8.4e-11 72.8 64 59.4
Lj6g0004300 Lotus japonicus HOM05D003481 ORTHO05D004001 1.1e-10 72.4 170 32.9
Sopen02g018780 Solanum pennellii HOM05D003481 ORTHO05D004001 1.1e-10 72.4 167 31.7
vmacro13536 Vaccinium macrocarpon HOM05D002689 ORTHO05D003129 1.1e-10 72.4 55 63.6
Actinidia33646 Actinidia chinensis HOM05D003481 ORTHO05D004001 1.4e-10 72.0 54 68.5
Aqoxy7G02779 Aquilegia oxysepala HOM05D003481 ORTHO05D004001 1.9e-10 71.6 168 32.1
DCAR_001341 Daucus carota HOM05D003481 ORTHO05D004001 1.9e-10 71.6 172 32.6
Ca_02512_v3 Cicer arietinum L. HOM05D003481 ORTHO05D004001 2.4e-10 71.2 170 32.4
Phvul.009G217900 Phaseolus vulgaris HOM05D003481 ORTHO05D004001 2.4e-10 71.2 170 32.9
arahy.Tifrunner.gnm1.ann1.0SF8RD Arachis hypogaea HOM05D003481 ORTHO05D004001 3.2e-10 70.9 170 32.4
arahy.Tifrunner.gnm1.ann1.D6X22R Arachis hypogaea HOM05D003481 ORTHO05D004001 3.2e-10 70.9 170 32.4
Medtr2g047908 Medicago truncatula HOM05D003481 ORTHO05D004001 4.2e-10 70.5 170 31.2
Psat0s4071g0040 Pisum sativum HOM05D003481 ORTHO05D004001 9.3e-10 69.3 170 31.8
vmacro19693 Vaccinium macrocarpon HOM05D003481 ORTHO05D004001 9.3e-10 69.3 36 94.4
Lalb_Chr08g0233181 Lupinus albus HOM05D003481 ORTHO05D004001 2.1e-09 68.2 170 30.6
ATR1132G011 Amborella trichopoda HOM05D003481 ORTHO05D004001 2.7e-09 67.8 170 31.8
PSO170G3331 Papaver somniferum HOM05D003481 ORTHO05D004001 2.7e-09 67.8 169 29.6
Rhsim07G0039800 Rhododendron simsii HOM05D002689 ORTHO05D003129 2.7e-09 67.8 55 60.0
PSO063G1971 Papaver somniferum HOM05D003481 ORTHO05D004001 3.5e-09 67.4 169 29.6
Glyma.09G083800 Glycine max HOM05D003481 ORTHO05D004001 4.6e-09 67.0 170 31.8
SEGI_29135 Sequoiadendron giganteum HOM05D003481 ORTHO05D004001 6.0e-09 66.6 169 30.2
Cc09_g07300 Coffea canephora HOM05D003481 ORTHO05D004001 7.9e-09 66.2 170 30.6
TWI38G1754 Tripterygium wilfordii HOM05D003481 ORTHO05D004001 7.9e-09 66.2 173 34.1
SalBow7G3129 Salvia bowleyana HOM05D003481 ORTHO05D004001 3.9e-08 63.9 166 30.1
QL04p025883 Quercus lobata HOM05D002689 ORTHO05D003129 1.1e-07 62.4 249 28.5
CDE02G2268 Ceratophyllum demersum HOM05D003481 ORTHO05D004001 3.3e-07 60.8 164 29.3
DCAR_025020 Daucus carota HOM05D002689 ORTHO05D003129 4.3e-07 60.5 100 39.0
Migut.H01305 Erythranthe guttata HOM05D003481 ORTHO05D004001 5.6e-07 60.1 170 27.6
SGA_v2.0_scaffold341G49384 Striga asiatica HOM05D003481 ORTHO05D004001 5.6e-07 60.1 166 28.9
Actinidia30959 Actinidia chinensis HOM05D002689 ORTHO05D003129 7.4e-07 59.7 79 43.0
Cc02_g25740 Coffea canephora HOM05D002689 ORTHO05D003129 9.6e-07 59.3 55 49.1
PGSC0003DMG400005810 Solanum tuberosum HOM05D002689 ORTHO05D003129 9.6e-07 59.3 58 48.3
Zm00001eb088370 Zea mays HOM05D003481 ORTHO05D004001 9.6e-07 59.3 54 53.7
Cc02_g25730 Coffea canephora HOM05D002689 ORTHO05D003129 1.3e-06 58.9 55 47.3
Dinv44011 Davidia involucrata HOM05D002689 ORTHO05D003129 1.3e-06 58.9 54 51.9
QL04p024685 Quercus lobata HOM05D002689 ORTHO05D003129 1.3e-06 58.9 104 37.5
HPP92_026238 Vanilla planifolia HOM05D003481 ORTHO05D004001 1.3e-06 58.9 55 58.2
Nitab4.5_0003616g0020 Nicotiana tabacum HOM05D002689 ORTHO05D003129 2.1e-06 58.2 58 46.6
Zm00001eb419780 Zea mays HOM05D003481 ORTHO05D004001 2.8e-06 57.8 54 53.7
Lj9A549T50 Lonicera japonica HOM05D002689 ORTHO05D003129 3.7e-06 57.4 55 52.7
Sopen08g004690 Solanum pennellii HOM05D002689 ORTHO05D003129 3.7e-06 57.4 58 46.6
Peaxi162Scf00075g01627 Petunia axillaris HOM05D002689 ORTHO05D003129 4.8e-06 57.0 58 51.7
CSS0035493 Camellia sinensis var. sinensis HOM05D003481 ORTHO05D004001 6.2e-06 56.6 44 65.9
CDE09G0686 Ceratophyllum demersum HOM05D003481 ORTHO05D004001 6.2e-06 56.6 51 60.8
Nitab4.5_0004913g0010 Nicotiana tabacum HOM05D002689 ORTHO05D003129 6.2e-06 56.6 50 52.0
MBI04_g08843_MAGBIO Magnolia biondii HOM05D002689 ORTHO05D003129 8.1e-06 56.2 67 43.3
RcHm_v2.0_Chr7g0240301 Rosa chinensis HOM05D003481 ORTHO05D004001 8.1e-06 56.2 33 75.8


User provided reference genes

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