Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15104 Vaccinium macrocarpon HOM05D005254 ORTHO05D007557 0.0e+00 1434.9 717 100.0
Rhsim01G0292000 Rhododendron simsii HOM05D005254 ORTHO05D007557 0.0e+00 1308.1 716 90.8
Actinidia25861 Actinidia chinensis HOM05D005254 ORTHO05D007557 0.0e+00 1189.1 717 82.8
CSS0038291 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 0.0e+00 1174.5 716 81.7
Dinv10118 Davidia involucrata HOM05D005254 ORTHO05D007557 0.0e+00 1141.7 716 78.8
GSVIVG01028140001 Vitis vinifera HOM05D005254 ORTHO05D007557 0.0e+00 1090.5 717 74.5
Hma1.2p1_0486F.1_g163430 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 0.0e+00 1076.2 716 74.3
Hma1.2p1_0486F.1_g163440 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 0.0e+00 1075.8 715 74.3
Cfa005773 Carpinus fangiana HOM05D005254 ORTHO05D007557 3.4e-303 1044.6 717 71.1
TAR633G1480 Trochodendron aralioides HOM05D005254 ORTHO05D007557 1.6e-300 1035.8 718 72.0
CiPaw.07G119100 Carya illinoinensis HOM05D005254 ORTHO05D007557 2.5e-298 1028.5 717 69.3
Thecc.01G315800 Theobroma cacao HOM05D005254 ORTHO05D007557 5.2e-296 1020.8 718 70.8
QL12p019422 Quercus lobata HOM05D005254 ORTHO05D007557 2.0e-295 1018.8 716 69.7
Duzib133G0392 Durio zibethinus HOM05D005254 ORTHO05D007557 7.5e-295 1016.9 717 69.6
Atru.chr5.974 Acer truncatum HOM05D005254 ORTHO05D007557 1.1e-293 1013.1 719 69.1
Haze_05067 Corylus avellana HOM05D005254 ORTHO05D007557 5.4e-293 1010.7 717 69.5
Ciclev10018561m.g Citrus clementina HOM05D005254 ORTHO05D007557 7.0e-293 1010.4 719 69.5
COL.COLO4_23211 Corchorus olitorius HOM05D005254 ORTHO05D007557 1.3e-291 1006.1 756 67.2
Cpa.g.sc18.77 Carica papaya HOM05D005254 ORTHO05D007557 3.1e-288 995.0 716 68.2
Nn3g21729 Nelumbo nucifera HOM05D005254 ORTHO05D007557 4.0e-288 994.6 717 67.4
Gohir.A08G119800 Gossypium hirsutum HOM05D005254 ORTHO05D007557 1.2e-287 993.0 717 68.3
Gorai.004G144800 Gossypium raimondii HOM05D005254 ORTHO05D007557 1.5e-287 992.6 717 68.3
MD17G1277500 Malus domestica HOM05D005254 ORTHO05D007557 4.4e-287 991.1 717 68.6
Gohir.D08G140700 Gossypium hirsutum HOM05D005254 ORTHO05D007557 7.5e-287 990.3 717 68.2
Nitab4.5_0007407g0050 Nicotiana tabacum HOM05D005254 ORTHO05D007557 1.3e-286 989.6 715 67.4
Manes.05G014200 Manihot esculenta HOM05D005254 ORTHO05D007557 4.9e-286 987.6 719 67.5
Cc01_g21580 Coffea canephora HOM05D005254 ORTHO05D007557 1.1e-285 986.5 717 67.2
Potri.002G194000 Populus trichocarpa HOM05D005254 ORTHO05D007557 1.1e-285 986.5 717 68.1
RcHm_v2.0_Chr3g0487381 Rosa chinensis HOM05D005254 ORTHO05D007557 1.1e-285 986.5 717 67.6
CAN.G1280.35 Capsicum annuum HOM05D005254 ORTHO05D007557 1.2e-284 983.0 716 66.5
FAN19G0333 Fragaria x ananassa HOM05D005254 ORTHO05D007557 6.0e-284 980.7 717 67.4
FAN26G2945 Fragaria x ananassa HOM05D005254 ORTHO05D007557 1.3e-283 979.5 717 66.9
FvH4_1g27060 Fragaria vesca HOM05D005254 ORTHO05D007557 1.7e-283 979.2 717 67.1
Solyc06g009530.3 Solanum lycopersicum HOM05D005254 ORTHO05D007557 6.6e-283 977.2 716 66.5
CANSAT25G1517 Cannabis sativa HOM05D005254 ORTHO05D007557 1.5e-282 976.1 717 66.0
Eucgr.H00999 Eucalyptus grandis HOM05D005254 ORTHO05D007557 4.3e-282 974.5 717 66.8
MD09G1284300 Malus domestica HOM05D005254 ORTHO05D007557 1.6e-281 972.6 717 67.1
Peaxi162Scf00058g02631 Petunia axillaris HOM05D005254 ORTHO05D007557 1.6e-281 972.6 716 66.3
HanXRQChr01g0000761 Helianthus annuus HOM05D005254 ORTHO05D007557 1.1e-280 969.9 718 67.1
Nitab4.5_0000363g0240 Nicotiana tabacum HOM05D005254 ORTHO05D007557 2.3e-280 968.8 715 66.4
PGR083G2196 Punica granatum HOM05D005254 ORTHO05D007557 2.3e-280 968.8 717 65.8
Sopen06g004190 Solanum pennellii HOM05D005254 ORTHO05D007557 1.5e-279 966.1 716 65.6
DCAR_018280 Daucus carota HOM05D005254 ORTHO05D007557 2.4e-277 958.7 715 66.0
Hund09648 Selenicereus undatus HOM05D005254 ORTHO05D007557 3.0e-275 951.8 724 64.4
Migut.N00932 Erythranthe guttata HOM05D005254 ORTHO05D007557 5.6e-274 947.6 717 65.8
MBI18_g03638_MAGBIO Magnolia biondii HOM05D005254 ORTHO05D007557 2.8e-273 945.3 718 65.3
Lsat_1_v5_gn_5_191360 Lactuca sativa HOM05D005254 ORTHO05D007557 4.7e-273 944.5 682 67.7
Glyma.03G220700 Glycine max HOM05D005254 ORTHO05D007557 8.1e-273 943.7 717 65.3
Sc17g0000380 Simmondsia chinensis HOM05D005254 ORTHO05D007557 1.8e-272 942.6 717 64.0
arahy.Tifrunner.gnm1.ann1.72UXVZ Arachis hypogaea HOM05D005254 ORTHO05D007557 6.8e-272 940.6 717 64.7
SalBow2G1139 Salvia bowleyana HOM05D005254 ORTHO05D007557 2.6e-271 938.7 716 65.5
TWI36G0433 Tripterygium wilfordii HOM05D005254 ORTHO05D007557 9.9e-271 936.8 718 64.8
PSO170G0810 Papaver somniferum HOM05D005254 ORTHO05D007557 1.3e-270 936.4 716 64.1
Sabra02G0162400 Salix brachista HOM05D005254 ORTHO05D007557 3.8e-270 934.9 777 62.0
Glyma.19G217500 Glycine max HOM05D005254 ORTHO05D007557 6.4e-270 934.1 717 65.1
arahy.Tifrunner.gnm1.ann1.AYF5PU Arachis hypogaea HOM05D005254 ORTHO05D007557 8.4e-270 933.7 717 64.2
ECA248G2092 Erigeron canadensis HOM05D005254 ORTHO05D007557 8.4e-270 933.7 707 65.1
PSO357G0205 Papaver somniferum HOM05D005254 ORTHO05D007557 1.9e-269 932.6 716 63.7
TPR.G4086 Trifolium pratense HOM05D005254 ORTHO05D007557 1.9e-269 932.6 718 64.2
Lj1g0000440 Lotus japonicus HOM05D005254 ORTHO05D007557 7.1e-269 930.6 717 64.0
Medtr7g109730 Medicago truncatula HOM05D005254 ORTHO05D007557 7.1e-269 930.6 717 63.9
MSTRG.17387 Avicennia marina HOM05D005254 ORTHO05D007557 2.1e-268 929.1 716 63.8
Aqoxy5G02683 Aquilegia oxysepala HOM05D005254 ORTHO05D007557 2.7e-268 928.7 717 62.6
VMungo1383G0540 Vigna mungo HOM05D005254 ORTHO05D007557 6.0e-268 927.5 717 64.7
Ca_09219_v3 Cicer arietinum L. HOM05D005254 ORTHO05D007557 2.3e-267 925.6 717 63.9
Phvul.001G214200 Phaseolus vulgaris HOM05D005254 ORTHO05D007557 2.3e-267 925.6 717 64.7
Lalb_Chr04g0260001 Lupinus albus HOM05D005254 ORTHO05D007557 7.3e-266 920.6 717 64.2
Psat0s425g0240 Pisum sativum HOM05D005254 ORTHO05D007557 6.2e-265 917.5 717 62.6
AUR62043231 Chenopodium quinoa HOM05D005254 ORTHO05D007557 9.0e-264 913.7 763 59.6
Ah.02g112410 Amaranthus hybridus HOM05D005254 ORTHO05D007557 4.4e-263 911.4 725 61.8
Lalb_Chr15g0078051 Lupinus albus HOM05D005254 ORTHO05D007557 9.9e-263 910.2 717 62.8
SGA_v2.0_scaffold6G03340 Striga asiatica HOM05D005254 ORTHO05D007557 2.9e-262 908.7 735 62.4
ClCG09G004990 Citrullus lanatus HOM05D005254 ORTHO05D007557 6.4e-262 907.5 718 62.1
CsaV3_7G030070 Cucumis sativus L. HOM05D005254 ORTHO05D007557 7.1e-261 904.0 719 61.9
FAN28G1559 Fragaria x ananassa HOM05D005254 ORTHO05D007557 1.1e-258 896.7 747 60.9
Sed0001136 Sechium edule HOM05D005254 ORTHO05D007557 3.3e-258 895.2 723 61.0
Sed0015859 Sechium edule HOM05D005254 ORTHO05D007557 3.3e-258 895.2 717 61.6
THA.LOC104802150 Tarenaya hassleriana HOM05D005254 ORTHO05D007557 6.7e-251 870.9 719 60.5
ATR0693G194 Amborella trichopoda HOM05D005254 ORTHO05D007557 8.7e-251 870.5 718 59.3
EL10As5g23556 Beta vulgaris HOM05D005254 ORTHO05D007557 3.7e-249 865.1 754 58.6
Oeu049924.2 Olea europaea HOM05D005254 ORTHO05D007557 5.8e-247 857.8 710 62.1
CARHR172690 Cardamine hirsuta HOM05D005254 ORTHO05D007557 2.9e-246 855.5 717 58.6
CSS0023845 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 4.9e-246 854.7 538 78.6
Carub.0005s2908 Capsella rubella HOM05D005254 ORTHO05D007557 6.4e-246 854.4 717 58.9
CDE01G0437 Ceratophyllum demersum HOM05D005254 ORTHO05D007557 5.5e-245 851.3 717 58.7
AUR62032507 Chenopodium quinoa HOM05D005254 ORTHO05D007557 1.3e-243 846.7 691 60.6
Sp5g01040 Schrenkiella parvula HOM05D005254 ORTHO05D007557 1.1e-242 843.6 717 58.6
Thhalv10005752m.g Eutrema salsugineum HOM05D005254 ORTHO05D007557 3.3e-242 842.0 717 57.9
AT3G62360 Arabidopsis thaliana HOM05D005254 ORTHO05D007557 7.4e-242 840.9 717 58.2
AL5G45120 Arabidopsis lyrata HOM05D005254 ORTHO05D007557 9.6e-242 840.5 717 58.2
Aa31LG10G16290 Aethionema arabicum HOM05D005254 ORTHO05D007557 8.2e-241 837.4 718 58.8
A09p54350 Brassica napus HOM05D005254 ORTHO05D007557 1.8e-240 836.3 718 57.7
BolC8t51301H Brassica oleracea HOM05D005254 ORTHO05D007557 3.1e-240 835.5 718 57.8
MELO3C015914.2 Cucumis melo HOM05D005254 ORTHO05D007557 3.1e-240 835.5 662 61.6
BraA09t40847Z Brassica rapa HOM05D005254 ORTHO05D007557 2.0e-239 832.8 718 57.5
C08p37230 Brassica napus HOM05D005254 ORTHO05D007557 2.9e-238 828.9 718 57.5
HPP92_011729 Vanilla planifolia HOM05D005254 ORTHO05D007557 5.9e-231 804.7 713 56.1
Zm00001eb340350 Zea mays HOM05D005254 ORTHO05D007557 4.2e-229 798.5 715 55.1
Lj1C15G16 Lonicera japonica HOM05D005254 ORTHO05D007557 1.2e-228 797.0 535 73.1
BcaC07g40720 Brassica carinata HOM05D005254 ORTHO05D007557 1.4e-219 766.9 718 54.6
SEGI_30263 Sequoiadendron giganteum HOM05D005254 ORTHO05D007557 2.3e-219 766.1 725 53.5
Prupe.3G010500 Prunus persica HOM05D005254 ORTHO05D007557 5.1e-219 765.0 538 70.6
unitig_22.g6696 Utricularia gibba HOM05D005254 ORTHO05D007557 1.3e-217 760.4 717 52.9
Oeu031896.1 Olea europaea HOM05D005254 ORTHO05D007557 1.2e-207 727.2 716 54.9
BcaC07g40722 Brassica carinata HOM05D005254 ORTHO05D007557 4.2e-197 692.2 720 51.0
Pp3c14_26400 Physcomitrium patens HOM05D005254 ORTHO05D007557 1.2e-188 664.1 719 48.0
Mapoly0002s0320 Marchantia polymorpha HOM05D005254 ORTHO05D007557 1.6e-188 663.7 727 47.0
SMO145G0116 Selaginella moellendorffii HOM05D005254 ORTHO05D007557 1.7e-177 627.1 690 46.5
AagrBONN_evm.TU.Sc2ySwM_344.3074 Anthoceros agrestis HOM05D005254 ORTHO05D007557 7.5e-162 575.1 758 41.4
FAN23G1589 Fragaria x ananassa HOM05D005254 ORTHO05D007557 2.4e-152 543.5 392 68.1
Actinidia20982 Actinidia chinensis HOM05D005254 ORTHO05D007557 3.9e-150 536.2 692 46.7
Os01g0300600 Oryza sativa ssp. japonica HOM05D005254 ORTHO05D007557 4.9e-145 519.2 416 62.7
C06p28230 Brassica napus HOM05D005254 ORTHO05D007557 1.0e-142 511.5 724 42.1
CBR_g12556 Chara braunii HOM05D005254 ORTHO05D007557 1.6e-132 477.6 708 38.4
BcaC08g45196 Brassica carinata HOM05D005254 ORTHO05D007557 5.5e-128 462.6 597 45.2
SMO145G0011 Selaginella moellendorffii HOM05D005254 ORTHO05D007557 4.3e-125 453.0 643 40.7
FAN23G1174 Fragaria x ananassa HOM05D005254 ORTHO05D007557 8.5e-113 412.1 358 55.9
BcaC07g42749 Brassica carinata HOM05D005254 ORTHO05D007557 1.7e-76 291.6 307 49.5
Lj1A15G51 Lonicera japonica HOM05D005254 ORTHO05D007557 7.7e-74 282.7 179 77.1
BolC6t37993H Brassica oleracea HOM05D005254 ORTHO05D012489 5.5e-72 276.6 352 43.2
SalBow3G0325 Salvia bowleyana HOM05D005254 ORTHO05D007557 1.4e-62 245.4 282 47.2
LjContig00310g0001105 Lotus japonicus HOM05D005254 ORTHO05D007557 3.2e-59 234.2 202 59.9
SalBow2G0161 Salvia bowleyana HOM05D005254 ORTHO05D355854 1.5e-56 225.3 286 45.1
TWI18G0218 Tripterygium wilfordii HOM05D005254 ORTHO05D007557 7.8e-50 203.0 140 72.1
BolC6t37991H Brassica oleracea HOM05D005254 ORTHO05D007557 9.9e-29 132.9 135 51.1
BcaC08g45197 Brassica carinata HOM05D005254 ORTHO05D007557 1.1e-22 112.8 100 55.0
CSS0046339 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 3.5e-18 97.8 60 78.3
EL10Ac4g10003 Beta vulgaris HOM05D005254 ORTHO05D007557 1.5e-16 92.4 64 70.3
Actinidia06365 Actinidia chinensis HOM05D005254 ORTHO05D055108 5.8e-13 80.5 53 73.6


User provided reference genes

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