Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14749 Vaccinium macrocarpon HOM05D007082 ORTHO05D008895 9.8e-118 426.8 211 100.0
Rhsim13G0027400 Rhododendron simsii HOM05D007082 ORTHO05D008895 7.1e-68 261.2 153 83.0
CSS0021912 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 1.0e-66 257.3 150 80.7
CSS0029740 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 1.0e-66 257.3 150 80.7
Dinv32900 Davidia involucrata HOM05D007082 ORTHO05D008895 4.0e-63 245.4 154 76.6
Lj2P1167T48 Lonicera japonica HOM05D007082 ORTHO05D008895 7.9e-59 231.1 150 71.3
Oeu025749.1 Olea europaea HOM05D007082 ORTHO05D008895 1.8e-58 229.9 150 72.0
Cc01_g19180 Coffea canephora HOM05D007082 ORTHO05D008895 5.1e-58 228.4 150 71.3
MSTRG.18253 Avicennia marina HOM05D007082 ORTHO05D008895 3.3e-57 225.7 150 70.7
CiPaw.07G089100 Carya illinoinensis HOM05D007082 ORTHO05D008895 1.3e-56 223.8 152 70.4
SGA_v2.0_scaffold12G06137 Striga asiatica HOM05D003153 ORTHO05D008895 1.3e-56 223.8 178 66.3
Haze_04674 Corylus avellana HOM05D007082 ORTHO05D008895 6.2e-56 221.5 159 66.0
Potri.005G212900 Populus trichocarpa HOM05D007082 ORTHO05D008895 6.2e-56 221.5 162 64.8
SGA_v2.0_scaffold1G00512 Striga asiatica HOM05D007082 ORTHO05D008895 6.2e-56 221.5 150 70.7
SalBow4G2456 Salvia bowleyana HOM05D007082 ORTHO05D008895 8.1e-56 221.1 148 70.3
Cfa004492 Carpinus fangiana HOM05D007082 ORTHO05D008895 3.1e-55 219.2 159 66.7
MD03G1260600 Malus domestica HOM05D007082 ORTHO05D008895 9.0e-55 217.6 152 67.8
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 9.0e-55 217.6 180 58.3
HanXRQChr05g0154391 Helianthus annuus HOM05D007082 ORTHO05D008895 2.6e-54 216.1 149 69.8
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 2.6e-54 216.1 154 66.9
CAN.G410.16 Capsicum annuum HOM05D007082 ORTHO05D008895 3.4e-54 215.7 150 68.0
Lsat_1_v5_gn_9_86820 Lactuca sativa HOM05D007082 ORTHO05D008895 1.0e-53 214.2 148 70.3
Haze_10047 Corylus avellana HOM05D007082 ORTHO05D008895 1.7e-53 213.4 159 64.8
TWI12G0539 Tripterygium wilfordii HOM05D007082 ORTHO05D008895 1.7e-53 213.4 153 69.3
DCAR_002714 Daucus carota HOM05D007082 ORTHO05D008895 3.8e-53 212.2 148 66.9
TAR622G1184 Trochodendron aralioides HOM05D007082 ORTHO05D008895 3.8e-53 212.2 157 66.2
Lsat_1_v5_gn_9_6120 Lactuca sativa HOM05D007082 ORTHO05D008895 6.5e-53 211.5 150 68.0
RcHm_v2.0_Chr6g0290411 Rosa chinensis HOM05D007082 ORTHO05D008895 8.4e-53 211.1 151 64.9
Atru.chr5.1487 Acer truncatum HOM05D000296 ORTHO05D000175 1.4e-52 210.3 149 67.8
QL12p020738 Quercus lobata HOM05D007082 ORTHO05D008895 1.9e-52 209.9 152 67.8
Nn5g27058 Nelumbo nucifera HOM05D007082 ORTHO05D008895 2.5e-52 209.5 171 62.0
CANSAT25G2376 Cannabis sativa HOM05D007082 ORTHO05D008895 3.2e-52 209.1 149 67.8
Migut.D00329 Erythranthe guttata HOM05D007082 ORTHO05D008895 5.5e-52 208.4 148 66.9
Sopen01g035010 Solanum pennellii HOM05D007082 ORTHO05D008895 7.1e-52 208.0 166 60.8
Ciclev10022619m.g Citrus clementina HOM05D007082 ORTHO05D008895 9.3e-52 207.6 148 67.6
Thecc.05G027700 Theobroma cacao HOM05D007082 ORTHO05D008895 2.1e-51 206.5 153 64.7
Nitab4.5_0016351g0010 Nicotiana tabacum HOM05D007082 ORTHO05D008895 3.5e-51 205.7 155 63.9
Haze_10052 Corylus avellana HOM05D007082 ORTHO05D008895 6.0e-51 204.9 157 63.7
FvH4_2g23151 Fragaria vesca HOM05D007082 ORTHO05D008895 6.0e-51 204.9 153 63.4
FAN20G2212 Fragaria x ananassa HOM05D007082 ORTHO05D008895 1.8e-50 203.4 153 62.1
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 5.1e-50 201.8 149 69.8
TPR.G34570 Trifolium pratense HOM05D007082 ORTHO05D008895 8.7e-50 201.1 152 61.2
Manes.01G205300 Manihot esculenta HOM05D007082 ORTHO05D008895 1.1e-49 200.7 150 65.3
Eucgr.H01429 Eucalyptus grandis HOM05D007082 ORTHO05D008895 2.5e-49 199.5 144 68.1
Psat6g025560 Pisum sativum HOM05D007082 ORTHO05D008895 3.3e-49 199.1 152 61.8
Hund09516 Selenicereus undatus HOM05D007082 ORTHO05D008895 3.3e-49 199.1 157 64.3
Eucgr.H01418 Eucalyptus grandis HOM05D007082 ORTHO05D008895 7.4e-49 198.0 144 68.1
Eucgr.H01442 Eucalyptus grandis HOM05D007082 ORTHO05D008895 7.4e-49 198.0 144 66.7
Medtr1g033230 Medicago truncatula HOM05D007082 ORTHO05D008895 9.6e-49 197.6 152 61.2
Medtr5g020430 Medicago truncatula HOM05D007082 ORTHO05D008895 1.6e-48 196.8 152 61.2
Lj2g0002316 Lotus japonicus HOM05D007082 ORTHO05D008895 3.7e-48 195.7 154 63.0
Eucgr.H01435 Eucalyptus grandis HOM05D007082 ORTHO05D008895 6.2e-48 194.9 144 66.7
Lalb_Chr10g0095561 Lupinus albus HOM05D007082 ORTHO05D008895 1.4e-47 193.7 151 62.3
arahy.Tifrunner.gnm1.ann1.4F6QX0 Arachis hypogaea HOM05D007082 ORTHO05D008895 3.1e-47 192.6 154 59.7
SHI10976 Sapria himalayana HOM05D007082 ORTHO05D008895 3.1e-47 192.6 154 62.3
Sed0015110 Sechium edule HOM05D007082 ORTHO05D008895 6.9e-47 191.4 156 61.5
Psat6g050280 Pisum sativum HOM05D007082 ORTHO05D008895 1.5e-46 190.3 152 60.5
ClCG07G000420 Citrullus lanatus HOM05D007082 ORTHO05D008895 3.4e-46 189.1 154 60.4
MBI19_g34822_MAGBIO Magnolia biondii HOM05D007082 ORTHO05D008895 1.0e-45 187.6 145 61.4
arahy.Tifrunner.gnm1.ann1.CZ80LA Arachis hypogaea HOM05D007082 ORTHO05D008895 1.3e-45 187.2 153 59.5
CsaV3_2G013600 Cucumis sativus L. HOM05D007082 ORTHO05D008895 1.7e-45 186.8 151 61.6
PGR119G0159 Punica granatum HOM05D007082 ORTHO05D008895 2.2e-45 186.4 152 61.8
MELO3C014298.2 Cucumis melo HOM05D007082 ORTHO05D008895 5.0e-45 185.3 151 60.9
HanXRQChr16g0516211 Helianthus annuus HOM05D007082 ORTHO05D008895 6.5e-45 184.9 150 60.7
COL.COLO4_14680 Corchorus olitorius HOM05D007082 ORTHO05D008895 1.1e-44 184.1 155 58.1
PSO832G2607 Papaver somniferum HOM05D007082 ORTHO05D008895 1.4e-44 183.7 159 56.0
Ah.11g050380 Amaranthus hybridus HOM05D007082 ORTHO05D008895 2.5e-44 183.0 155 58.1
PSO210G1980 Papaver somniferum HOM05D007082 ORTHO05D008895 2.5e-44 183.0 164 54.3
Sc05g0001390 Simmondsia chinensis HOM05D007082 ORTHO05D008895 3.2e-44 182.6 150 60.0
Duzib128G1180 Durio zibethinus HOM05D007082 ORTHO05D008895 5.5e-44 181.8 153 58.2
Cpa.g.sc41.65 Carica papaya HOM05D007082 ORTHO05D008895 7.1e-44 181.4 144 59.0
THA.LOC104800748 Tarenaya hassleriana HOM05D007082 ORTHO05D008895 7.1e-44 181.4 149 60.4
EL10Ac5g10526 Beta vulgaris HOM05D007082 ORTHO05D008895 1.8e-42 176.8 154 57.1
Aa31LG5G6620 Aethionema arabicum HOM05D007082 ORTHO05D008895 3.0e-42 176.0 162 52.5
CARHR006820 Cardamine hirsuta HOM05D007082 ORTHO05D008895 3.9e-42 175.6 162 51.9
Gorai.001G088200 Gossypium raimondii HOM05D007082 ORTHO05D008895 9.7e-41 171.0 150 53.3
AL1G17250 Arabidopsis lyrata HOM05D007082 ORTHO05D008895 6.3e-40 168.3 148 53.4
Gohir.D07G082600 Gossypium hirsutum HOM05D007082 ORTHO05D008895 8.2e-40 167.9 148 53.4
Glyma.08G176000 Glycine max HOM05D007082 ORTHO05D008895 3.1e-39 166.0 153 54.2
Thhalv10008979m.g Eutrema salsugineum HOM05D007082 ORTHO05D008895 5.3e-39 165.2 149 52.3
Carub.0001s0641 Capsella rubella HOM05D007082 ORTHO05D008895 9.0e-39 164.5 147 51.7
CDE05G2411 Ceratophyllum demersum HOM05D007082 ORTHO05D008895 9.0e-39 164.5 149 55.7
Sp1g05880 Schrenkiella parvula HOM05D007082 ORTHO05D008895 2.0e-38 163.3 148 53.4
VMungo1215G3041 Vigna mungo HOM05D007082 ORTHO05D008895 5.9e-38 161.8 155 54.2
A08p35770 Brassica napus HOM05D007082 ORTHO05D008895 1.0e-37 161.0 148 51.4
C08p02920 Brassica napus HOM05D007082 ORTHO05D008895 1.0e-37 161.0 146 52.1
BolC8t47089H Brassica oleracea HOM05D007082 ORTHO05D008895 1.0e-37 161.0 146 52.1
BraA08t35483Z Brassica rapa HOM05D007082 ORTHO05D008895 1.0e-37 161.0 148 51.4
AT1G07130 Arabidopsis thaliana HOM05D007082 ORTHO05D008895 2.2e-37 159.8 148 49.3
ECA247G0055 Erigeron canadensis HOM05D007082 ORTHO05D008895 1.4e-36 157.1 116 59.5
Phvul.003G015400 Phaseolus vulgaris HOM05D007082 ORTHO05D008895 1.6e-35 153.7 151 53.6
BcaB03g13405 Brassica carinata HOM05D007082 ORTHO05D008895 2.1e-35 153.3 148 50.0
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 3.6e-35 152.5 161 55.9
BolC8t47080H Brassica oleracea HOM05D007082 ORTHO05D008895 4.6e-35 152.1 145 49.7
Os03g0366900 Oryza sativa ssp. japonica HOM05D007082 ORTHO05D008895 1.4e-34 150.6 151 51.0
SEGI_21621 Sequoiadendron giganteum HOM05D007082 ORTHO05D008895 1.4e-34 150.6 156 48.7
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 3.0e-34 149.4 150 47.3
MD15G1065600 Malus domestica HOM05D007082 ORTHO05D008895 5.1e-34 148.7 122 57.4
Zm00001eb394240 Zea mays HOM05D007082 ORTHO05D008895 1.5e-33 147.1 152 51.3
C08p02850 Brassica napus HOM05D007082 ORTHO05D008895 3.3e-33 146.0 158 44.9
Eucgr.L00806 Eucalyptus grandis HOM05D007082 ORTHO05D008895 4.3e-33 145.6 144 52.1
Gohir.A07G077800 Gossypium hirsutum HOM05D007082 ORTHO05D008895 2.2e-32 143.3 148 49.3
AUR62032313 Chenopodium quinoa HOM05D007082 ORTHO05D008895 6.3e-32 141.7 173 46.8
Lj3g0026065 Lotus japonicus HOM05D007082 ORTHO05D008895 2.4e-31 139.8 116 59.5
AUR62011993 Chenopodium quinoa HOM05D007082 ORTHO05D008895 1.2e-30 137.5 171 46.2
Pp3c1_6180 Physcomitrium patens HOM05D007082 ORTHO05D008895 6.5e-29 131.7 150 42.0
Aqoxy5G02465 Aquilegia oxysepala HOM05D007082 ORTHO05D008895 7.2e-28 128.3 157 47.8
Mapoly0041s0121 Marchantia polymorpha HOM05D007082 ORTHO05D008895 7.2e-28 128.3 152 41.4
ATR0580G091 Amborella trichopoda HOM05D007082 ORTHO05D008895 2.3e-26 123.2 147 46.9
AagrBONN_evm.TU.Sc2ySwM_117.1416 Anthoceros agrestis HOM05D007082 ORTHO05D008895 2.4e-23 113.2 146 39.0
Medtr5g020340 Medicago truncatula HOM05D000096 ORTHO05D008895 5.9e-22 108.6 145 45.5
Actinidia09115 Actinidia chinensis HOM05D007082 ORTHO05D008895 8.2e-16 88.2 53 75.5
SMO307G0023 Selaginella moellendorffii HOM05D007082 ORTHO05D008895 9.4e-12 74.7 133 34.6
MCO14G264 Micromonas commoda HOM05D007082 ORTHO05D008895 1.6e-11 73.9 188 28.2
Sc05g0001360 Simmondsia chinensis HOM05D007082 ORTHO05D008895 2.0e-09 67.0 143 37.1
Peaxi162Scf01115g00007 Petunia axillaris HOM05D007082 ORTHO05D008895 1.3e-08 64.3 60 55.0
PGSC0003DMG400045025 Solanum tuberosum HOM05D007082 ORTHO05D008895 2.8e-08 63.2 111 38.7
PRCOL_00001098 Prasinoderma coloniale HOM05D007082 ORTHO05D008895 1.2e-06 57.8 162 28.4


User provided reference genes

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