Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 5.1e-162 574.3 285 100.0
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.3e-117 426.8 257 86.0
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 2.3e-98 362.8 266 71.4
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 2.8e-91 339.3 264 66.3
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 3.6e-91 339.0 264 66.3
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 8.3e-88 327.8 264 66.3
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 2.4e-87 326.2 265 63.8
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 5.4e-87 325.1 257 65.8
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 9.2e-87 324.3 272 63.6
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 2.1e-86 323.2 264 63.6
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 2.7e-86 322.8 272 63.2
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 6.0e-86 321.6 265 63.0
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 6.0e-86 321.6 264 64.8
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 1.7e-85 320.1 260 64.6
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 3.9e-85 318.9 264 62.9
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 5.1e-85 318.5 263 63.5
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 1.5e-84 317.0 264 62.9
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 3.3e-84 315.8 277 61.0
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 7.3e-84 314.7 264 62.5
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 2.1e-83 313.2 264 62.1
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 2.1e-83 313.2 266 63.2
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 4.7e-83 312.0 264 60.2
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 6.2e-83 311.6 257 63.8
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 1.1e-82 310.8 267 60.3
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 1.1e-82 310.8 264 59.1
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 1.4e-82 310.5 262 61.5
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 1.8e-82 310.1 257 62.6
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 8.9e-82 307.8 257 63.8
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 5.8e-81 305.1 262 60.3
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 7.6e-81 304.7 264 60.6
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 1.3e-80 303.9 260 61.9
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 1.3e-80 303.9 265 58.9
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 1.3e-80 303.9 260 60.8
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 1.7e-80 303.5 260 60.8
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 3.8e-80 302.4 261 60.2
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 4.9e-80 302.0 261 60.2
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 4.9e-80 302.0 264 60.2
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 5.4e-79 298.5 301 58.1
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 7.1e-79 298.1 260 60.0
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 7.1e-79 298.1 260 60.0
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 1.6e-78 297.0 262 61.1
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 2.1e-78 296.6 260 59.2
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 2.1e-78 296.6 260 59.2
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 4.6e-78 295.4 260 58.8
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 7.8e-78 294.7 264 57.6
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 7.8e-78 294.7 264 58.0
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 1.3e-77 293.9 272 57.4
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 3.9e-77 292.4 260 58.1
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 5.1e-77 292.0 265 58.5
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 8.7e-77 291.2 257 59.5
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 1.1e-76 290.8 257 60.3
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 1.9e-76 290.0 260 56.9
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 9.6e-76 287.7 260 57.7
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 1.2e-75 287.3 264 57.2
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 2.1e-75 286.6 265 57.7
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 2.1e-75 286.6 265 57.7
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 3.6e-75 285.8 264 58.0
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 3.6e-75 285.8 264 56.4
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 3.6e-75 285.8 265 58.5
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 4.7e-75 285.4 257 57.6
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 6.2e-75 285.0 251 62.5
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 8.1e-75 284.6 260 58.5
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 2.4e-74 283.1 260 58.1
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 4.0e-74 282.3 259 58.7
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 1.2e-73 280.8 262 58.0
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 2.0e-73 280.0 260 56.2
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 4.4e-73 278.9 259 59.5
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 2.2e-72 276.6 260 55.0
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 3.8e-72 275.8 262 56.9
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 6.4e-72 275.0 262 57.3
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 6.4e-72 275.0 262 56.9
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 1.1e-71 274.2 315 50.2
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 4.2e-71 272.3 264 53.8
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 9.3e-71 271.2 264 54.9
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 9.3e-71 271.2 260 55.8
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 7.8e-70 268.1 266 53.4
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 2.3e-69 266.5 259 54.4
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 8.7e-69 264.6 264 52.7
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 2.5e-68 263.1 265 55.1
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 3.3e-68 262.7 259 54.4
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 9.6e-68 261.2 264 53.0
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 2.1e-67 260.0 247 57.5
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 1.8e-66 256.9 263 55.5
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.4e-66 256.5 251 59.8
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 3.1e-66 256.1 267 50.9
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 4.0e-66 255.8 251 59.4
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 4.0e-66 255.8 285 49.8
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 6.9e-66 255.0 258 56.2
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 1.2e-65 254.2 267 50.9
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 1.5e-65 253.8 244 56.1
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 2.0e-65 253.4 264 53.0
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 2.5e-60 236.5 248 52.4
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 2.5e-60 236.5 248 52.4
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 9.6e-60 234.6 233 53.2
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 1.3e-59 234.2 221 54.8
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 4.8e-59 232.3 252 52.0
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 6.2e-59 231.9 216 56.5
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 1.4e-58 230.7 217 54.4
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 4.5e-57 225.7 239 52.3
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 2.9e-56 223.0 276 46.7
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 1.2e-54 217.6 222 51.4
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 8.7e-53 211.5 319 44.8
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 6.9e-50 201.8 150 66.7
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 2.6e-49 199.9 195 56.4
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 1.0e-48 198.0 147 63.9
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 9.3e-47 191.4 132 67.4
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 8.7e-45 184.9 197 54.3
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 1.3e-43 181.0 265 44.5
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 8.2e-43 178.3 254 44.9
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 5.5e-39 165.6 157 56.1
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 1.4e-37 161.0 169 53.8
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 5.7e-36 155.6 208 44.7
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 8.2e-35 151.8 155 53.5
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 4.5e-33 146.0 130 57.7
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 4.5e-33 146.0 159 52.2
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 4.1e-26 122.9 256 33.2
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 4.5e-25 119.4 112 52.7
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 1.6e-22 110.9 77 71.4
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 2.1e-22 110.5 256 29.7
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 1.2e-14 84.7 70 57.1
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 5.9e-09 65.9 86 44.2
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 1.7e-08 64.3 43 69.8


User provided reference genes

Program Settings