Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14316 Vaccinium macrocarpon HOM05D004977 ORTHO05D006454 1.4e-127 459.9 286 100.0
Actinidia04910 Actinidia chinensis HOM05D004977 ORTHO05D006454 7.6e-73 278.1 268 68.7
CSS0048805 Camellia sinensis var. sinensis HOM05D004977 ORTHO05D006454 1.2e-65 254.2 269 69.1
vmacro04053 Vaccinium macrocarpon HOM05D004977 ORTHO05D006454 2.6e-65 253.1 267 71.5
Dinv21726 Davidia involucrata HOM05D004977 ORTHO05D006454 2.3e-53 213.4 268 62.7
TAR633G0771 Trochodendron aralioides HOM05D004977 ORTHO05D006454 1.8e-50 203.8 273 52.7
Nn6g34596 Nelumbo nucifera HOM05D004977 ORTHO05D006454 2.4e-50 203.4 271 54.2
TAR636G3193 Trochodendron aralioides HOM05D004977 ORTHO05D006454 1.0e-48 198.0 270 54.1
Gohir.D04G019200 Gossypium hirsutum HOM05D004977 ORTHO05D006454 2.2e-48 196.8 269 63.6
Gorai.012G023000 Gossypium raimondii HOM05D004977 ORTHO05D006454 2.2e-48 196.8 269 63.6
Gohir.A05G395800 Gossypium hirsutum HOM05D004977 ORTHO05D006454 8.5e-48 194.9 269 63.9
Manes.04G055000 Manihot esculenta HOM05D004977 ORTHO05D006454 2.5e-47 193.4 268 52.6
Prupe.8G068000 Prunus persica HOM05D004977 ORTHO05D006454 3.2e-47 193.0 266 49.2
Nitab4.5_0002611g0110 Nicotiana tabacum HOM05D004977 ORTHO05D006454 5.5e-47 192.2 267 55.4
Peaxi162Scf00401g00211 Petunia axillaris HOM05D004977 ORTHO05D006454 1.4e-45 187.6 267 56.9
Solyc07g005880.3 Solanum lycopersicum HOM05D004977 ORTHO05D006454 1.8e-45 187.2 267 54.3
Oeu058189.1 Olea europaea HOM05D004977 ORTHO05D006454 3.9e-45 186.0 270 60.7
Sopen07g001990 Solanum pennellii HOM05D004977 ORTHO05D006454 1.1e-44 184.5 267 51.3
TWI31G0709 Tripterygium wilfordii HOM05D004977 ORTHO05D006454 2.0e-44 183.7 270 50.4
Haze_23597 Corylus avellana HOM05D004977 ORTHO05D006454 4.4e-44 182.6 267 55.1
COL.COLO4_16322 Corchorus olitorius HOM05D004977 ORTHO05D006454 2.2e-43 180.3 269 48.0
Glyma.12G096100 Glycine max HOM05D004977 ORTHO05D006454 6.3e-43 178.7 267 51.7
Potri.001G213900 Populus trichocarpa HOM05D004977 ORTHO05D006454 1.4e-42 177.6 265 48.3
VMungo1127G1403 Vigna mungo HOM05D004977 ORTHO05D006454 1.4e-42 177.6 267 51.3
CsaV3_6G038660 Cucumis sativus L. HOM05D004977 ORTHO05D006454 9.1e-42 174.9 280 46.1
Lj3g0003647 Lotus japonicus HOM05D004977 ORTHO05D006454 9.1e-42 174.9 269 52.4
MD05G1047200 Malus domestica HOM05D004977 ORTHO05D006454 9.1e-42 174.9 267 44.6
Eucgr.J00591 Eucalyptus grandis HOM05D004977 ORTHO05D006454 1.2e-41 174.5 269 50.9
SGA_v2.0_scaffold7G04011 Striga asiatica HOM05D004977 ORTHO05D006454 4.5e-41 172.6 269 56.9
Phvul.011G100500 Phaseolus vulgaris HOM05D004977 ORTHO05D006454 1.0e-40 171.4 267 45.3
Sabra04G0149200 Salix brachista HOM05D004977 ORTHO05D006454 2.9e-40 169.9 265 44.5
Nitab4.5_0003551g0050 Nicotiana tabacum HOM05D004977 ORTHO05D006454 3.8e-40 169.5 260 51.9
Duzib114G0826 Durio zibethinus HOM05D004977 ORTHO05D006454 5.0e-40 169.1 267 47.9
MD07G1072700 Malus domestica HOM05D004977 ORTHO05D006454 6.5e-40 168.7 269 50.2
Sc11g0002670 Simmondsia chinensis HOM05D004977 ORTHO05D006454 8.5e-40 168.3 268 50.4
TWI79G0798 Tripterygium wilfordii HOM05D004977 ORTHO05D006454 1.4e-39 167.5 269 49.8
MELO3C014528.2 Cucumis melo HOM05D004977 ORTHO05D006454 2.5e-39 166.8 282 46.5
Cc01_g07900 Coffea canephora HOM05D004977 ORTHO05D006454 3.2e-39 166.4 262 50.0
CAN.G160.14 Capsicum annuum HOM05D004977 ORTHO05D006454 7.2e-39 165.2 266 51.1
Sp6g23180 Schrenkiella parvula HOM05D004977 ORTHO05D006454 1.2e-38 164.5 274 50.0
CiPaw.13G126500 Carya illinoinensis HOM05D004977 ORTHO05D006454 1.6e-38 164.1 267 55.8
Aa31LG1G13410 Aethionema arabicum HOM05D004977 ORTHO05D006454 7.9e-38 161.8 271 45.8
Medtr4g050180 Medicago truncatula HOM05D004977 ORTHO05D006454 1.4e-37 161.0 281 54.1
MSTRG.21003 Avicennia marina HOM05D004977 ORTHO05D006454 3.0e-37 159.8 267 45.7
Glyma.06G308700 Glycine max HOM05D004977 ORTHO05D006454 3.0e-37 159.8 267 44.2
Lalb_Chr01g0005801 Lupinus albus HOM05D004977 ORTHO05D006454 6.7e-37 158.7 270 45.6
Thhalv10012587m.g Eutrema salsugineum HOM05D004977 ORTHO05D006454 1.1e-36 157.9 269 44.6
Sed0002287 Sechium edule HOM05D004977 ORTHO05D006454 5.7e-36 155.6 286 40.2
PGR044G2329 Punica granatum HOM05D004977 ORTHO05D006454 1.3e-35 154.5 267 49.1
QL01p019105 Quercus lobata HOM05D004977 ORTHO05D006454 1.7e-35 154.1 266 43.2
MSTRG.21010 Avicennia marina HOM05D004977 ORTHO05D006454 2.2e-35 153.7 268 54.5
TPR.G4657 Trifolium pratense HOM05D004977 ORTHO05D006454 2.8e-35 153.3 277 53.8
Migut.D02372 Erythranthe guttata HOM05D004977 ORTHO05D006454 6.3e-35 152.1 270 55.6
Aqoxy1G00589 Aquilegia oxysepala HOM05D004977 ORTHO05D006454 3.1e-34 149.8 273 46.9
Ciclev10027762m.g Citrus clementina HOM05D004977 ORTHO05D006454 9.1e-34 148.3 269 55.0
THA.LOC104810945 Tarenaya hassleriana HOM05D004977 ORTHO05D006454 1.2e-33 147.9 272 54.0
FvH4_3g28250 Fragaria vesca HOM05D004977 ORTHO05D006454 1.6e-33 147.5 267 47.2
Lsat_1_v5_gn_4_27921 Lactuca sativa HOM05D004977 ORTHO05D006454 2.6e-33 146.7 273 56.0
FAN11G1922 Fragaria x ananassa HOM05D004977 ORTHO05D006454 3.5e-33 146.4 268 47.0
Thecc.10G121800 Theobroma cacao HOM05D004977 ORTHO05D006454 4.5e-33 146.0 267 44.9
MD02G1244300 Malus domestica HOM05D004977 ORTHO05D006454 5.9e-33 145.6 261 45.2
QL01p019084 Quercus lobata HOM05D004977 ORTHO05D006454 1.3e-32 144.4 281 53.7
HanXRQChr16g0525891 Helianthus annuus HOM05D004977 ORTHO05D006454 3.8e-32 142.9 279 46.6
Hund25154 Selenicereus undatus HOM05D004977 ORTHO05D006454 3.8e-32 142.9 271 48.7
Ah.02g126710 Amaranthus hybridus HOM05D001549 ORTHO05D003098 6.5e-32 142.1 268 50.0
CARHR191520 Cardamine hirsuta HOM05D004977 ORTHO05D006454 8.5e-32 141.7 278 50.7
GSVIVG01037357001 Vitis vinifera HOM05D004977 ORTHO05D006454 4.2e-31 139.4 270 40.7
ClCG02G022520 Citrullus lanatus HOM05D004977 ORTHO05D006454 9.4e-31 138.3 277 45.8
RcHm_v2.0_Chr5g0051061 Rosa chinensis HOM05D004977 ORTHO05D006454 1.2e-30 137.9 269 46.8
BcaB05g22754 Brassica carinata HOM05D004977 ORTHO05D006454 1.6e-30 137.5 273 51.6
FAN21G3176 Fragaria x ananassa HOM05D004977 ORTHO05D006454 2.1e-30 137.1 268 45.5
FAN16G1264 Fragaria x ananassa HOM05D004977 ORTHO05D006454 3.6e-30 136.3 268 45.9
BcaC03g13854 Brassica carinata HOM05D004977 ORTHO05D006454 1.4e-29 134.4 269 46.5
Psat7g203480 Pisum sativum HOM05D004977 ORTHO05D006454 5.2e-29 132.5 260 42.7
SalBow6G4955 Salvia bowleyana HOM05D004977 ORTHO05D006454 8.8e-29 131.7 269 44.2
PSO339G5000 Papaver somniferum HOM05D004977 ORTHO05D006454 5.7e-28 129.0 292 40.4
PSO384G3330 Papaver somniferum HOM05D004977 ORTHO05D006454 9.7e-28 128.3 292 41.1
Actinidia37641 Actinidia chinensis HOM05D004977 ORTHO05D006454 3.1e-26 123.2 146 52.7
EL10Ac6g14670 Beta vulgaris HOM05D004977 ORTHO05D006454 1.3e-24 117.9 270 49.3
CDE05G0645 Ceratophyllum demersum HOM05D004977 ORTHO05D006454 1.7e-24 117.5 272 35.7
Dinv18862 Davidia involucrata HOM05D004977 ORTHO05D006454 1.7e-24 117.5 158 60.1
BNapus_Darmor_BZH_scaffold_38p00910 Brassica napus HOM05D004977 ORTHO05D006454 2.2e-24 117.1 265 46.0
BolC2t07133H Brassica oleracea HOM05D004977 ORTHO05D006454 5.0e-24 115.9 261 44.8
Atru.chr7.2567 Acer truncatum HOM05D004977 ORTHO05D006454 3.2e-23 113.2 196 42.9
Carub.0006s1965 Capsella rubella HOM05D004977 ORTHO05D006454 5.5e-23 112.5 267 37.1
ATR0697G081 Amborella trichopoda HOM05D004977 ORTHO05D006454 1.6e-22 110.9 293 38.2
DCAR_018210 Daucus carota HOM05D004977 ORTHO05D006454 2.7e-22 110.2 268 53.0
HPP92_002246 Vanilla planifolia HOM05D004977 ORTHO05D006454 3.6e-22 109.8 274 39.4
Cpa.g.sc103.53 Carica papaya HOM05D004977 ORTHO05D006454 8.0e-22 108.6 270 46.3
BcaC07g41303 Brassica carinata HOM05D004977 ORTHO05D006454 1.0e-21 108.2 266 36.1
unitig_699.g19732 Utricularia gibba HOM05D004977 ORTHO05D006454 1.4e-21 107.8 223 44.4
AUR62003055 Chenopodium quinoa HOM05D004977 ORTHO05D006454 3.0e-21 106.7 274 44.2
Os11g0572100 Oryza sativa ssp. japonica HOM05D004977 ORTHO05D006454 8.8e-21 105.1 286 44.8
AL6G32970 Arabidopsis lyrata HOM05D004977 ORTHO05D006454 3.7e-19 99.8 273 34.1
AT5G22010 Arabidopsis thaliana HOM05D004977 ORTHO05D006454 7.0e-18 95.5 272 34.9
SHI47216 Sapria himalayana HOM05D004977 ORTHO05D006454 7.0e-18 95.5 226 41.2
CANSAT25G3123 Cannabis sativa HOM05D004977 ORTHO05D006454 2.7e-17 93.6 283 40.3
arahy.Tifrunner.gnm1.ann1.78MUYP Arachis hypogaea HOM05D004977 ORTHO05D006454 2.9e-16 90.1 294 42.5
FAN25G3311 Fragaria x ananassa HOM05D004977 ORTHO05D006454 2.5e-15 87.0 139 43.9
ECA234G1388 Erigeron canadensis HOM05D004977 ORTHO05D006454 4.2e-15 86.3 273 44.7
AUR62007869 Chenopodium quinoa HOM05D004977 ORTHO05D006454 3.6e-14 83.2 150 52.0
Zm00001eb114240 Zea mays HOM05D004977 ORTHO05D006454 1.5e-12 77.8 282 30.5
arahy.Tifrunner.gnm1.ann1.7R5ZBL Arachis hypogaea HOM05D004977 ORTHO05D006454 2.6e-12 77.0 120 41.7
FAN25G0235 Fragaria x ananassa HOM05D004977 ORTHO05D006454 3.7e-11 73.2 40 77.5
BraA02t05635Z Brassica rapa HOM05D004977 ORTHO05D006454 4.9e-11 72.8 124 44.4
Lj2A831T23 Lonicera japonica HOM05D004977 ORTHO05D006454 1.1e-10 71.6 37 81.1
Migut.D02375 Erythranthe guttata HOM05D004977 ORTHO05D006454 1.4e-10 71.2 40 77.5
Ca_19486_v3 Cicer arietinum L. HOM05D004977 ORTHO05D006454 4.5e-09 66.2 174 35.6
BolC8t51866H Brassica oleracea HOM05D004977 ORTHO05D006454 7.8e-09 65.5 110 44.5
TAR369G0311 Trochodendron aralioides HOM05D004977 ORTHO05D006454 2.5e-07 60.5 36 72.2


User provided reference genes

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