Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 3.7e-146 521.5 265 100.0
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 1.0e-95 354.0 242 66.9
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 1.3e-95 353.6 231 68.0
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 6.6e-95 351.3 230 67.4
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 8.6e-95 350.9 235 67.7
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 9.5e-94 347.4 237 66.7
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 2.1e-93 346.3 235 66.0
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.1e-93 346.3 237 66.2
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 4.7e-93 345.1 236 65.3
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 6.1e-93 344.7 237 65.8
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 8.0e-93 344.4 237 65.8
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 8.0e-93 344.4 237 65.8
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 1.0e-92 344.0 236 66.1
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.4e-92 343.6 237 65.8
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 1.8e-92 343.2 236 63.1
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 8.9e-92 340.9 237 65.4
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 1.2e-91 340.5 229 65.1
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 3.4e-91 339.0 235 65.1
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 4.4e-91 338.6 235 64.7
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 5.7e-91 338.2 233 63.5
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 5.7e-91 338.2 230 63.9
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 3.7e-90 335.5 233 62.7
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 3.7e-90 335.5 235 63.8
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 4.9e-90 335.1 238 63.4
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 6.3e-90 334.7 230 64.8
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 6.3e-90 334.7 230 64.8
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 6.3e-90 334.7 230 64.8
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 1.1e-89 334.0 233 62.2
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 1.1e-89 334.0 228 65.4
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 1.8e-89 333.2 227 64.8
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 2.4e-89 332.8 237 62.9
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 9.2e-89 330.9 233 63.9
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 2.0e-88 329.7 231 61.5
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 4.5e-88 328.6 230 62.6
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 7.8e-88 327.8 232 62.9
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 7.8e-88 327.8 225 64.4
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 7.8e-88 327.8 230 62.2
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 1.0e-87 327.4 227 61.7
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.3e-87 327.0 234 61.5
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 2.3e-87 326.2 225 64.4
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 2.3e-87 326.2 225 64.0
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 2.3e-87 326.2 227 61.2
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 2.3e-87 326.2 233 60.5
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 2.9e-87 325.9 262 56.5
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 5.0e-87 325.1 228 61.8
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 5.0e-87 325.1 231 60.2
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 6.6e-87 324.7 224 63.4
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 8.6e-87 324.3 230 62.2
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 1.1e-86 323.9 225 63.6
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.1e-86 323.9 231 60.2
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 1.5e-86 323.6 232 62.1
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 1.5e-86 323.6 228 61.8
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 1.5e-86 323.6 227 61.7
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 1.5e-86 323.6 229 61.1
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 1.5e-86 323.6 225 63.1
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 1.5e-86 323.6 235 61.7
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 1.5e-86 323.6 229 62.0
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 1.9e-86 323.2 232 61.6
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 1.9e-86 323.2 228 62.7
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 2.5e-86 322.8 225 61.8
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 3.3e-86 322.4 227 62.6
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 4.3e-86 322.0 232 61.6
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 4.3e-86 322.0 232 61.2
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 5.6e-86 321.6 232 60.8
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 5.6e-86 321.6 232 62.1
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 5.6e-86 321.6 236 58.1
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 9.5e-86 320.9 232 61.2
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 9.5e-86 320.9 236 58.1
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 9.5e-86 320.9 236 57.2
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 2.1e-85 319.7 230 60.9
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 2.1e-85 319.7 234 58.5
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 2.8e-85 319.3 236 57.2
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 3.6e-85 318.9 232 60.3
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 6.1e-85 318.2 230 60.4
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 8.0e-85 317.8 231 61.0
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 8.0e-85 317.8 224 61.6
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 1.0e-84 317.4 227 60.4
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 2.3e-84 316.2 228 62.3
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 2.3e-84 316.2 228 62.3
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 2.3e-84 316.2 228 62.3
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 4.0e-84 315.5 222 61.3
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 4.0e-84 315.5 226 61.1
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 4.0e-84 315.5 219 64.8
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 4.0e-84 315.5 228 61.4
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 4.0e-84 315.5 228 59.6
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 6.8e-84 314.7 229 61.6
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.2e-83 313.9 231 60.6
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 1.5e-83 313.5 228 59.6
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 2.0e-83 313.2 226 61.1
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 4.4e-83 312.0 239 56.9
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 1.3e-82 310.5 196 71.4
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 1.7e-82 310.1 222 61.3
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 2.2e-82 309.7 232 59.1
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 2.2e-82 309.7 230 60.0
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 2.9e-82 309.3 232 58.2
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 4.9e-82 308.5 211 64.0
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 4.9e-82 308.5 234 58.1
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 8.3e-82 307.8 247 54.7
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 1.1e-81 307.4 231 58.9
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.4e-81 307.0 237 59.5
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 2.4e-81 306.2 225 59.6
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 7.0e-81 304.7 225 60.4
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 1.6e-80 303.5 238 57.6
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 1.6e-80 303.5 233 59.2
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 2.0e-80 303.1 225 61.3
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 3.5e-80 302.4 232 57.8
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 7.8e-80 301.2 229 59.4
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 7.8e-80 301.2 203 64.0
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 1.7e-79 300.1 231 56.7
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 3.0e-79 299.3 231 56.3
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 3.9e-79 298.9 237 55.7
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 5.0e-79 298.5 232 56.5
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 4.3e-78 295.4 232 56.5
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 7.3e-78 294.7 230 56.5
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 2.8e-77 292.7 232 56.0
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 6.2e-77 291.6 234 57.3
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 8.0e-77 291.2 228 56.1
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 1.4e-76 290.4 223 57.4
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 3.1e-76 289.3 224 58.0
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 5.2e-76 288.5 232 55.2
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 6.8e-76 288.1 230 54.8
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.2e-75 287.3 224 56.7
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 1.2e-75 287.3 230 54.3
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 4.4e-75 285.4 223 57.0
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 6.4e-74 281.6 233 53.2
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 5.4e-73 278.5 207 60.9
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.2e-72 277.3 233 55.8
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 1.0e-71 274.2 225 56.0
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 5.1e-71 271.9 223 55.6
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 2.8e-69 266.2 230 53.0
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 3.6e-69 265.8 225 54.7
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 3.6e-69 265.8 198 62.1
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 8.1e-69 264.6 225 54.7
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 8.1e-69 264.6 225 54.7
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 8.1e-69 264.6 225 54.7
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 1.1e-68 264.2 225 54.7
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 1.2e-67 260.8 225 53.8
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 2.6e-67 259.6 219 54.8
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 1.3e-66 257.3 229 50.7
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 3.2e-65 252.7 232 53.0
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 1.2e-64 250.8 229 51.5
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 1.6e-64 250.4 231 48.9
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 6.0e-64 248.4 229 48.5
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 1.3e-63 247.3 221 50.2
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 3.9e-63 245.7 228 50.0
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 1.6e-61 240.4 237 48.9
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 3.6e-61 239.2 236 49.2
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 1.4e-60 237.3 165 62.4
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 2.4e-60 236.5 198 56.1
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 6.8e-60 235.0 234 48.7
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 1.2e-59 234.2 229 49.3
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 7.6e-59 231.5 227 48.0
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 1.2e-56 224.2 159 64.2
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 1.7e-55 220.3 241 44.0
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 3.9e-55 219.2 171 62.0
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 6.6e-55 218.4 215 49.8
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 2.5e-54 216.5 227 44.5
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 4.3e-54 215.7 229 45.4
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 1.3e-50 204.1 243 42.0
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 4.2e-49 199.1 224 43.8
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 1.2e-48 197.6 206 46.6
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 6.0e-48 195.3 230 41.7
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 1.3e-47 194.1 231 45.0
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 5.1e-47 192.2 189 47.1
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 1.5e-46 190.7 154 57.8
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 2.1e-45 186.8 132 63.6
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 2.8e-45 186.4 221 43.0
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 4.0e-44 182.6 136 58.1
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 2.6e-43 179.9 151 53.6
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 3.4e-43 179.5 317 33.1
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 1.2e-35 154.5 108 61.1
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 5.7e-30 135.6 102 56.9
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 2.7e-24 116.7 87 60.9
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 6.1e-24 115.5 96 54.2
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 2.5e-14 83.6 49 73.5
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 1.1e-12 78.2 74 51.4
BcaC09g50623 Brassica carinata HOM05D003931 ORTHO05D004577 9.4e-09 65.1 50 58.0
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 9.7e-06 55.1 43 53.5


User provided reference genes

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