Gene: AT4G27030

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G27030
  • Transcript Identifier AT4G27030.1
  • Gene Type Coding gene
  • Location Chr4 : 13571951-13572922 : positive

Gene Family Information

  • ID HOM05D003931
  • #Genes/#Species 177/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G27030.1
  • symbol FADA
  • Alias FAD4,FATTY ACID DESATURASE 4
  • uniprot Q9SZ42

Descriptions

  • Description fatty acid desaturase A
  • Computational description fatty acid desaturase A (FADA); FUNCTIONS IN: Delta 3-trans hexadecenoic acid phosphatidylglycerol desaturase activity; INVOLVED IN: response to karrikin, phosphatidylglycerol metabolic process, unsaturated fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kua-ubiquitin conjugating enzyme hybrid, localisation (InterPro:IPR019547); BEST Arabidopsis thaliana protein match is: Kua-ubiquitin conjugating enzyme hybrid localisation domain (TAIR:AT1G62190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0080167
IEP
GOA Databaseresponse to karrikin
GO:0006631
IEA
GOA Databasefatty acid metabolic process
GO:0008611
ISS
Gene Ontologyether lipid biosynthetic process
GO:0046471
IMP
Gene Ontologyphosphatidylglycerol metabolic process1
GO:0006636
IMP
Gene Ontologyunsaturated fatty acid biosynthetic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0052637
IMP
Gene Ontologydelta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity1
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0102851
IEA
Gene Ontology1-18:2-2-16:0-phosphatidylglycerol desaturase activity
GO:0102654
IEA
Gene Ontology1-18:1-2-16:0-phosphatidylglycerol trans-3 desaturase activity
GO:0050207
ISS
Gene Ontologyplasmanylethanolamine desaturase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
ISM
NAS
Gene Ontologychloroplast1
GO:0009536
IEA
GOA Databaseplastid
GO:0031969
IEA
GOA Databasechloroplast membrane
GO:0031969
IDA
Gene Ontologychloroplast membrane1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019547 B domain of TMEM189, localisation domain
Mapman id Description
5.1.7.4 Lipid metabolism.fatty acid biosynthesis.fatty acid desaturation.trans-delta-3-hexadecenoic acid phosphatidylglycerol desaturase (FAD4)