Gene: Lsat_1_v5_gn_5_6180
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_5_6180
- Transcript Identifier Lsat_1_v5_gn_5_6180.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_5 : 7085628-7086497 : positive
Gene Family Information
- ID HOM05D003931
- #Genes/#Species 177/94
- Phylogenetic origin
- ID ORTHO05D004577
- #Genes/#Species 176/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Lsat_1_v5_gn_5_6180.v5
- pacid 38967043
Descriptions
- Description K10704 - ubiquitin-conjugating enzyme E2 variant (UBE2V)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046471 | ISO | PLAZA Integrative Orthology | phosphatidylglycerol metabolic process | AT4G27030 |
| GO:0006636 | ISO | PLAZA Integrative Orthology | unsaturated fatty acid biosynthetic process | AT4G27030 |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT4G27030 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0052637 | ISO | PLAZA Integrative Orthology | delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | AT4G27030 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G27030 |
| GO:0031969 | ISO | PLAZA Integrative Orthology | chloroplast membrane | AT4G27030 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019547 | B domain of TMEM189, localisation domain |
| Mapman id | Description |
|---|---|
| 5.1.7.4 | Lipid metabolism.fatty acid biosynthesis.fatty acid desaturation.trans-delta-3-hexadecenoic acid phosphatidylglycerol desaturase (FAD4) |