Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11612 Vaccinium macrocarpon HOM05D003885 ORTHO05D004623 2.8e-106 388.7 201 100.0
Actinidia30379 Actinidia chinensis HOM05D003885 ORTHO05D004623 2.1e-93 345.9 230 81.7
Rhsim06G0232400 Rhododendron simsii HOM05D003885 ORTHO05D004623 2.3e-92 342.4 246 77.6
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.1e-89 333.6 231 77.9
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.1e-89 333.6 231 77.9
Dinv40883 Davidia involucrata HOM05D003885 ORTHO05D004623 7.0e-89 330.9 201 84.1
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 1.1e-86 323.6 230 74.8
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 2.5e-86 322.4 228 75.9
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 4.2e-86 321.6 230 74.8
TWI39G1241 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 2.1e-85 319.3 226 73.5
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 4.7e-85 318.2 230 73.9
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 6.1e-85 317.8 233 73.8
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 8.0e-85 317.4 230 73.9
TAR627G0008 Trochodendron aralioides HOM05D003885 ORTHO05D004623 1.0e-84 317.0 230 74.3
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 1.4e-84 316.6 235 73.6
GSVIVG01014735001 Vitis vinifera HOM05D003885 ORTHO05D004623 1.4e-84 316.6 231 74.0
Manes.03G143400 Manihot esculenta HOM05D003885 ORTHO05D004623 2.3e-84 315.8 231 73.2
CANSAT56G2895 Cannabis sativa HOM05D003885 ORTHO05D004623 5.2e-84 314.7 229 73.4
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 6.7e-84 314.3 230 75.2
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 8.8e-84 313.9 229 74.2
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 1.1e-83 313.5 229 72.9
TWI38G2335 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 2.0e-83 312.8 230 71.3
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 4.4e-83 311.6 230 72.6
Lj1C893G21 Lonicera japonica HOM05D003885 ORTHO05D004623 4.4e-83 311.6 214 79.9
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 4.4e-83 311.6 232 73.3
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 5.7e-83 311.2 231 73.2
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 9.7e-83 310.5 231 72.7
AUR62035674 Chenopodium quinoa HOM05D003885 ORTHO05D004623 9.7e-83 310.5 204 80.9
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 9.7e-83 310.5 206 81.1
Potri.001G370366 Populus trichocarpa HOM05D003885 ORTHO05D004623 9.7e-83 310.5 231 74.5
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 1.3e-82 310.1 230 72.2
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 2.8e-82 308.9 230 73.9
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 2.8e-82 308.9 233 73.0
arahy.Tifrunner.gnm1.ann1.JC0UDE Arachis hypogaea HOM05D003885 ORTHO05D004623 3.7e-82 308.5 231 71.9
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 4.8e-82 308.1 233 72.5
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 1.4e-81 306.6 231 71.9
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 1.4e-81 306.6 232 71.1
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 1.8e-81 306.2 231 71.4
Lj1g0011673 Lotus japonicus HOM05D003885 ORTHO05D004623 1.8e-81 306.2 230 70.9
ClCG10G004480 Citrullus lanatus HOM05D003885 ORTHO05D004623 3.1e-81 305.4 231 72.3
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 3.1e-81 305.4 231 71.0
Lj4g0022976 Lotus japonicus HOM05D003885 ORTHO05D004623 3.1e-81 305.4 229 71.2
Thecc.07G008300 Theobroma cacao HOM05D003885 ORTHO05D004623 3.1e-81 305.4 230 71.3
Prupe.6G027200 Prunus persica HOM05D003885 ORTHO05D004623 4.1e-81 305.1 230 72.6
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 7.0e-81 304.3 231 70.6
CsaV3_3G004310 Cucumis sativus L. HOM05D003885 ORTHO05D004623 9.1e-81 303.9 230 72.6
TPR.G2621 Trifolium pratense HOM05D003885 ORTHO05D004623 9.1e-81 303.9 228 71.1
DCAR_003369 Daucus carota HOM05D003885 ORTHO05D004623 1.2e-80 303.5 226 73.5
PGR083G1050 Punica granatum HOM05D003885 ORTHO05D004623 1.2e-80 303.5 231 72.3
MELO3C014122.2 Cucumis melo HOM05D003885 ORTHO05D004623 2.0e-80 302.8 231 72.3
DCAR_019010 Daucus carota HOM05D003885 ORTHO05D004623 2.0e-80 302.8 229 73.4
Lalb_Chr16g0386671 Lupinus albus HOM05D003885 ORTHO05D004623 2.0e-80 302.8 229 70.3
Cc05_g15250 Coffea canephora HOM05D003885 ORTHO05D004623 3.5e-80 302.0 230 71.7
EL10Ac4g07536 Beta vulgaris HOM05D003885 ORTHO05D004623 4.5e-80 301.6 243 69.5
Psat0s1834g0040 Pisum sativum HOM05D003885 ORTHO05D004623 4.5e-80 301.6 227 71.4
Peaxi162Scf00139g01026 Petunia axillaris HOM05D003885 ORTHO05D004623 5.9e-80 301.2 201 78.1
Sed0017804 Sechium edule HOM05D003885 ORTHO05D004623 5.9e-80 301.2 229 72.1
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 1.7e-79 299.7 231 70.6
VMungo0251G1810 Vigna mungo HOM05D003885 ORTHO05D004623 2.2e-79 299.3 229 71.2
Glyma.17G141500 Glycine max HOM05D003885 ORTHO05D004623 2.9e-79 298.9 230 71.3
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 2.9e-79 298.9 231 70.6
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 5.0e-79 298.1 232 69.8
THA.LOC104822723 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 5.0e-79 298.1 231 69.3
MD03G1032500 Malus domestica HOM05D003885 ORTHO05D004623 6.5e-79 297.7 232 70.3
MD11G1036400 Malus domestica HOM05D003885 ORTHO05D004623 6.5e-79 297.7 232 70.3
Medtr4g100970 Medicago truncatula HOM05D003885 ORTHO05D004623 6.5e-79 297.7 228 69.7
PGSC0003DMG400008684 Solanum tuberosum HOM05D003885 ORTHO05D004623 6.5e-79 297.7 233 70.4
THA.LOC104810295 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 6.5e-79 297.7 231 68.8
Lsat_1_v5_gn_5_188801 Lactuca sativa HOM05D003885 ORTHO05D004623 8.5e-79 297.4 232 69.8
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 1.1e-78 297.0 231 69.3
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 1.5e-78 296.6 232 69.4
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 1.5e-78 296.6 232 69.4
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 1.5e-78 296.6 232 69.4
MBI11_g04749_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 1.5e-78 296.6 234 71.4
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 1.9e-78 296.2 232 69.0
Phvul.003G220300 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 2.5e-78 295.8 229 69.9
RcHm_v2.0_Chr3g0480061 Rosa chinensis HOM05D003885 ORTHO05D004623 2.5e-78 295.8 234 70.9
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 4.2e-78 295.0 233 68.7
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 4.2e-78 295.0 233 68.7
Ca_21964_v3 Cicer arietinum L. HOM05D003885 ORTHO05D004623 4.2e-78 295.0 230 69.6
Glyma.05G059200 Glycine max HOM05D003885 ORTHO05D004623 4.2e-78 295.0 230 70.9
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 4.2e-78 295.0 232 69.0
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 5.5e-78 294.7 231 68.8
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 1.6e-77 293.1 230 70.4
THA.LOC104815689 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.6e-77 293.1 235 67.7
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 2.1e-77 292.7 232 68.5
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 2.1e-77 292.7 232 68.5
Duzib170G0277 Durio zibethinus HOM05D003885 ORTHO05D004623 2.1e-77 292.7 225 69.3
Solyc10g005800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 2.1e-77 292.7 234 69.2
Sopen10g001770 Solanum pennellii HOM05D003885 ORTHO05D004623 2.1e-77 292.7 234 69.2
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 2.7e-77 292.4 232 68.5
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 2.7e-77 292.4 232 68.5
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 3.6e-77 292.0 232 68.5
ATR1153G045 Amborella trichopoda HOM05D003885 ORTHO05D004623 4.7e-77 291.6 232 71.1
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 6.1e-77 291.2 232 68.1
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 1.0e-76 290.4 230 68.3
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.0e-76 290.4 233 69.1
SalBow2G3065 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.3e-76 289.3 215 71.2
MSTRG.14500 Avicennia marina HOM05D003885 ORTHO05D004623 6.7e-76 287.7 230 68.7
Aqoxy3G02916 Aquilegia oxysepala HOM05D003885 ORTHO05D004623 1.2e-75 287.0 233 69.1
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 1.2e-75 287.0 232 66.8
Lalb_Chr05g0221281 Lupinus albus HOM05D003885 ORTHO05D004623 1.5e-75 286.6 229 66.8
FAN09G2902 Fragaria x ananassa HOM05D003885 ORTHO05D004623 2.6e-75 285.8 234 69.2
FvH4_6g22570 Fragaria vesca HOM05D003885 ORTHO05D004623 3.3e-75 285.4 233 68.7
FAN05G2176 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.3e-75 285.4 234 68.4
FAN14G0574 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.3e-75 285.4 233 68.7
ECA246G5298 Erigeron canadensis HOM05D003885 ORTHO05D004623 5.7e-75 284.6 229 69.4
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 5.7e-75 284.6 231 69.3
Sed0004751 Sechium edule HOM05D003885 ORTHO05D004623 7.5e-75 284.3 225 71.1
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 3.1e-73 278.9 233 66.5
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 5.3e-73 278.1 284 58.8
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 4.5e-72 275.0 225 67.1
Sopen07g033990 Solanum pennellii HOM05D003885 ORTHO05D004623 4.5e-72 275.0 230 66.1
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 5.9e-72 274.6 251 64.1
PSO210G1946 Papaver somniferum HOM05D003885 ORTHO05D004623 7.7e-72 274.2 229 65.1
SalBow2G0786 Salvia bowleyana HOM05D003885 ORTHO05D004623 7.7e-72 274.2 228 65.8
Lsat_1_v5_gn_5_2000 Lactuca sativa HOM05D003885 ORTHO05D004623 1.3e-71 273.5 271 57.9
Phvul.008G217400 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 1.7e-71 273.1 220 67.3
PSO210G5551 Papaver somniferum HOM05D003885 ORTHO05D004623 2.9e-71 272.3 228 64.9
SalBow2G1425 Salvia bowleyana HOM05D003885 ORTHO05D004623 5.0e-71 271.6 228 65.4
Nitab4.5_0010643g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 6.5e-71 271.2 227 66.1
PGSC0003DMG400022160 Solanum tuberosum HOM05D003885 ORTHO05D004623 1.1e-70 270.4 237 65.4
SalBow2G3218 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.5e-70 269.2 228 64.9
SalBow8G3434 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.5e-70 269.2 228 64.9
MSTRG.13030 Avicennia marina HOM05D003885 ORTHO05D004623 3.2e-70 268.9 231 64.5
HanXRQChr08g0233271 Helianthus annuus HOM05D003885 ORTHO05D004623 3.2e-70 268.9 229 65.1
HanXRQChr05g0160321 Helianthus annuus HOM05D003885 ORTHO05D004623 6.1e-69 264.6 229 63.8
Migut.M01631 Erythranthe guttata HOM05D003885 ORTHO05D004623 1.4e-68 263.5 227 64.3
Mapoly0072s0064 Marchantia polymorpha HOM05D003885 ORTHO05D004623 2.8e-66 255.8 230 64.3
Pp3c5_15120 Physcomitrium patens HOM05D003885 ORTHO05D004623 4.8e-66 255.0 230 64.8
unitig_61.g26133 Utricularia gibba HOM05D003885 ORTHO05D004623 4.8e-66 255.0 232 62.5
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 1.1e-65 253.8 232 63.4
FAN02G3468 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.4e-65 253.4 214 68.2
unitig_0.g990 Utricularia gibba HOM05D003885 ORTHO05D004623 1.8e-65 253.1 232 62.1
Nitab4.5_0003328g0110 Nicotiana tabacum HOM05D003885 ORTHO05D004623 8.6e-63 244.2 233 61.4
AagrBONN_evm.TU.Sc2ySwM_228.690 Anthoceros agrestis HOM05D003885 ORTHO05D004623 8.0e-61 237.7 228 59.6
CBR_g58788 Chara braunii HOM05D003885 ORTHO05D004623 2.0e-59 233.0 230 58.7
Actinidia10568 Actinidia chinensis HOM05D003885 ORTHO05D004623 1.2e-56 223.8 185 71.4
CSS0032461 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 4.7e-53 211.8 187 67.9
SHI27704 Sapria himalayana HOM05D003885 ORTHO05D004623 6.1e-53 211.5 186 61.8
Nitab4.5_0000152g0340 Nicotiana tabacum HOM05D003885 ORTHO05D004623 3.1e-52 209.1 253 51.0
CSS0035354 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 3.4e-51 205.7 218 58.7
Hma1.2p1_0133F.1_g061250 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.3e-50 203.8 121 86.0
CSS0021051 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 4.1e-49 198.7 121 85.1
SMO356G0623 Selaginella moellendorffii HOM05D003885 ORTHO05D004623 6.0e-48 194.9 237 54.0
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 1.9e-46 189.9 144 70.1
TPR.G37597 Trifolium pratense HOM05D003885 ORTHO05D004623 1.9e-46 189.9 121 79.3
SGA_v2.0_scaffold8G04417 Striga asiatica HOM05D003885 ORTHO05D004623 4.7e-45 185.3 144 70.1
SalBow2G2880 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.9e-42 176.0 113 79.6
SalBow2G0143 Salvia bowleyana HOM05D003885 ORTHO05D004623 3.7e-42 175.6 113 78.8
SalBow2G2704 Salvia bowleyana HOM05D003885 ORTHO05D004623 4.1e-41 172.2 113 77.9
MCO14G028 Micromonas commoda HOM05D003885 ORTHO05D004623 2.1e-40 169.9 233 48.5
Cre24.g755447 Chlamydomonas reinhardtii HOM05D003885 ORTHO05D004623 6.0e-40 168.3 236 46.2
RcHm_v2.0_Chr1g0318721 Rosa chinensis HOM05D003885 ORTHO05D004623 2.5e-38 162.9 122 74.6
Solyc07g065800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 2.4e-33 146.4 155 54.8
MBI19_g41323_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 1.6e-32 143.7 81 87.7
Hma1.2p1_0133F.1_g061260 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 7.8e-32 141.4 84 85.7
arahy.Tifrunner.gnm1.ann1.BGFV7A Arachis hypogaea HOM05D003885 ORTHO05D004623 5.1e-31 138.7 92 79.3
TPR.G37600 Trifolium pratense HOM05D003885 ORTHO05D004623 1.1e-30 137.5 75 88.0
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 4.0e-28 129.0 134 56.0
SalBow8G5188 Salvia bowleyana HOM05D003885 ORTHO05D004623 8.9e-28 127.9 162 50.0
BcaC01g04006 Brassica carinata HOM05D003885 ORTHO05D004623 9.9e-27 124.4 76 80.3
Zm00001eb157240 Zea mays HOM05D003885 ORTHO05D004623 3.8e-26 122.5 79 78.5
RcHm_v2.0_Chr3g0468911 Rosa chinensis HOM05D003885 ORTHO05D004623 5.1e-23 112.1 198 40.4
C05p54720 Brassica napus HOM05D003885 ORTHO05D004623 3.6e-21 105.9 74 73.0
COL.COLO4_09698 Corchorus olitorius HOM05D003885 ORTHO05D004623 8.1e-21 104.8 101 56.4
ATR0733G199 Amborella trichopoda HOM05D003885 ORTHO05D004623 1.1e-20 104.4 73 79.5
PRCOL_00003569 Prasinoderma coloniale HOM05D003885 ORTHO05D004623 1.1e-20 104.4 207 41.5
MCO14G027 Micromonas commoda HOM05D003885 ORTHO05D004623 1.5e-19 100.5 178 41.6
BcaB04g21002 Brassica carinata HOM05D003885 ORTHO05D004623 9.9e-19 97.8 102 55.9
ATR0733G138 Amborella trichopoda HOM05D003885 ORTHO05D004623 1.5e-14 84.0 44 88.6
Lsat_1_v5_gn_8_106160 Lactuca sativa HOM05D003885 ORTHO05D004623 4.8e-13 79.0 56 69.6
CSS0038981 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.3e-10 70.9 98 55.1
CSS0001317 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 6.4e-10 68.6 93 51.6
PSO384G2596 Papaver somniferum HOM05D003885 ORTHO05D004623 6.4e-10 68.6 52 63.5
Haze_27574 Corylus avellana HOM05D003885 ORTHO05D164292 1.0e-07 61.2 111 36.9


User provided reference genes

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