Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 0.0e+00 1484.9 755 100.0
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 0.0e+00 1389.8 707 100.0
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 9.1e-283 976.9 709 74.9
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 5.9e-266 921.0 708 71.0
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 1.6e-247 859.8 607 75.5
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 6.6e-241 837.8 711 64.8
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.3e-233 813.5 726 62.4
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 1.2e-231 807.0 708 62.3
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 9.3e-211 737.6 707 57.6
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 1.6e-210 736.9 702 58.1
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 1.6e-210 736.9 727 57.4
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 4.6e-210 735.3 707 57.3
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 2.5e-208 729.6 707 57.9
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 2.1e-207 726.5 707 56.3
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 1.8e-206 723.4 707 56.7
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 1.5e-205 720.3 702 56.1
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 2.2e-204 716.5 708 55.8
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 5.6e-200 701.8 633 60.0
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.3e-199 700.7 708 55.8
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 1.6e-199 700.3 649 58.9
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 5.3e-198 695.3 708 55.6
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 6.9e-198 694.9 704 55.1
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 2.6e-197 693.0 702 55.7
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 4.5e-197 692.2 702 55.6
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 2.2e-196 689.9 713 55.1
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 1.9e-195 686.8 707 53.7
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 2.7e-194 682.9 707 54.2
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 6.0e-194 681.8 708 54.9
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 6.0e-194 681.8 707 54.0
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 7.9e-194 681.4 628 59.6
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 7.9e-194 681.4 716 55.0
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 1.3e-193 680.6 702 54.4
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 1.8e-193 680.2 715 53.7
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 3.9e-193 679.1 724 53.7
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 5.1e-193 678.7 708 53.8
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 6.7e-193 678.3 706 55.4
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 9.0e-190 667.9 712 53.5
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 4.5e-189 665.6 707 53.2
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 1.3e-188 664.1 704 53.8
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 7.1e-187 658.3 720 53.1
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 2.7e-186 656.4 705 52.5
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 3.5e-186 656.0 707 52.8
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 4.3e-184 649.0 704 52.8
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 4.3e-184 649.0 709 51.2
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 7.4e-184 648.3 619 57.8
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 2.1e-183 646.7 707 51.9
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 6.3e-183 645.2 707 52.8
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 5.3e-182 642.1 724 52.1
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 1.7e-180 637.1 708 52.1
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 1.7e-180 637.1 600 57.7
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 2.9e-180 636.3 718 52.4
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 3.2e-179 632.9 740 50.7
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.2e-178 630.9 712 51.8
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.6e-178 629.4 706 51.1
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 6.1e-178 628.6 617 56.9
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 8.7e-177 624.8 703 51.6
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 8.7e-177 624.8 707 50.9
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 3.3e-176 622.9 701 51.4
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 5.7e-176 622.1 708 51.1
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 4.8e-175 619.0 715 50.8
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 1.1e-174 617.8 597 56.1
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 3.1e-174 616.3 707 50.8
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 1.7e-172 610.5 712 49.9
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 8.5e-172 608.2 715 51.2
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 1.4e-171 607.4 707 49.6
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.5e-171 606.7 707 50.4
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 5.5e-171 605.5 707 49.6
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 7.2e-171 605.1 627 53.9
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.2e-170 604.4 707 49.8
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 3.6e-170 602.8 667 50.7
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 6.1e-170 602.1 752 47.1
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 7.9e-170 601.7 712 49.0
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 1.0e-169 601.3 707 48.9
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 1.0e-169 601.3 703 48.8
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.3e-169 600.1 829 44.4
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 5.1e-169 599.0 732 48.0
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 1.5e-168 597.4 704 49.3
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 1.5e-168 597.4 708 49.4
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 9.7e-168 594.7 707 48.5
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 2.2e-167 593.6 699 49.5
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 4.8e-167 592.4 699 49.1
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 6.3e-167 592.0 708 48.6
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 8.2e-167 591.7 707 49.4
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 8.2e-167 591.7 703 48.9
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 1.8e-166 590.5 703 48.9
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 2.0e-165 587.0 707 48.8
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 3.4e-165 586.3 739 48.8
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 2.9e-164 583.2 618 53.1
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 2.9e-164 583.2 618 53.1
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 2.9e-164 583.2 618 53.1
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 8.5e-164 581.6 618 53.1
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 3.2e-163 579.7 618 52.9
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 4.2e-163 579.3 700 48.7
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 6.1e-162 575.5 707 49.2
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.7e-159 567.4 618 52.6
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 7.0e-158 562.0 521 59.3
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 3.5e-157 559.7 673 48.3
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 2.2e-156 557.0 707 47.2
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 6.5e-156 555.4 676 48.2
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 5.5e-155 552.4 707 48.9
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 2.3e-153 547.0 707 47.1
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.8e-150 537.3 542 55.5
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 2.4e-150 537.0 708 45.9
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 2.0e-149 533.9 704 46.0
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 2.0e-144 517.3 485 58.4
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 5.4e-142 509.2 584 51.4
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.1e-138 495.7 724 44.2
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 1.2e-136 491.5 540 53.1
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.8e-129 467.6 430 59.1
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 1.1e-126 458.4 606 45.7
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 4.3e-123 446.4 639 43.2
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 3.1e-121 440.3 421 56.8
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 8.3e-119 432.2 628 40.0
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 3.5e-117 426.8 440 54.3
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 3.4e-112 410.2 634 40.7
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 1.4e-110 404.8 615 42.8
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 6.0e-109 399.4 547 45.0
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 2.0e-104 384.4 510 48.6
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 2.3e-100 370.9 608 41.1
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 3.0e-100 370.5 383 54.0
Potri.005G061432 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.2e-98 365.2 430 49.3
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 5.8e-96 356.3 624 39.7
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 5.1e-92 343.2 405 49.9
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 7.3e-91 339.3 631 38.0
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 8.1e-90 335.9 577 40.6
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.6e-85 321.6 519 41.4
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 1.6e-85 321.6 607 37.4
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 1.2e-80 305.4 524 41.0
MD08G1246300 Malus domestica HOM05D003810 ORTHO05D004416 2.7e-77 294.3 223 66.4
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 1.6e-74 285.0 168 83.3
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 3.7e-74 283.9 337 52.2
Hma1.2p1_2995F.1_g331440 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 4.8e-74 283.5 408 47.8
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 2.2e-71 274.6 188 72.3
BolC6t35297H Brassica oleracea HOM05D003810 ORTHO05D004416 2.2e-66 258.1 394 42.6
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.8e-65 255.0 158 79.1
FAN09G2262 Fragaria x ananassa HOM05D003810 ORTHO05D004416 4.1e-65 253.8 455 39.1
FAN05G0299 Fragaria x ananassa HOM05D003810 ORTHO05D010162 1.6e-61 241.9 241 56.8
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 6.1e-61 240.0 216 58.8
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.3e-60 238.0 376 41.2
CBR_g28523 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-58 231.9 267 46.8
SHI21694 Sapria himalayana HOM05D003810 ORTHO05D004416 1.8e-57 228.4 197 57.9
Hma1.2p1_2995F.1_g331430 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.0e-55 222.6 254 52.4
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 3.2e-54 217.6 163 65.0
Actinidia03659 Actinidia chinensis HOM05D003810 ORTHO05D004416 7.9e-53 213.0 199 60.8
Lj3g0026478 Lotus japonicus HOM05D003810 ORTHO05D004416 1.1e-51 209.1 340 38.2
CiPaw.14G066700 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.3e-50 205.7 263 45.2
Lalb_Chr06g0169761 Lupinus albus HOM05D003810 ORTHO05D004416 9.1e-49 199.5 267 45.7
RcHm_v2.0_Chr2g0090241 Rosa chinensis HOM05D003810 ORTHO05D004416 8.5e-47 193.0 498 35.3
HPP92_016056 Vanilla planifolia HOM05D003810 ORTHO05D004416 5.2e-44 183.7 136 67.6
CAN.G306.2 Capsicum annuum HOM05D003810 ORTHO05D004416 5.7e-43 180.3 183 55.2
CAN.G306.3 Capsicum annuum HOM05D003810 ORTHO05D004416 7.4e-43 179.9 183 55.2
Hund17709 Selenicereus undatus HOM05D003810 ORTHO05D004416 2.6e-40 171.4 245 42.9
ECA233G1945 Erigeron canadensis HOM05D000449 ORTHO05D003939 1.7e-34 152.1 311 35.7
Oeu005536.2 Olea europaea HOM05D003810 ORTHO05D004416 2.1e-29 135.2 221 40.3
QL12p013194 Quercus lobata HOM05D003810 ORTHO05D004416 1.6e-24 119.0 103 60.2
TAR629G2180 Trochodendron aralioides HOM05D003810 ORTHO05D004416 2.9e-23 114.8 67 82.1
CAN.G790.44 Capsicum annuum HOM05D000872 ORTHO05D000777 4.2e-22 110.9 211 38.4
SalBow3G3831 Salvia bowleyana HOM05D003810 ORTHO05D004416 5.5e-22 110.5 109 53.2
SGA_v2.0_scaffold126G33829 Striga asiatica HOM05D003810 ORTHO05D004416 7.2e-22 110.2 175 40.0
TPR.G30194 Trifolium pratense HOM05D003810 ORTHO05D004416 1.0e-20 106.3 163 41.7
SMO031G0001 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 8.9e-20 103.2 103 47.6
CAN.G312.5 Capsicum annuum HOM05D003810 ORTHO05D000001 8.3e-18 96.7 214 35.5
Hund08475 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.4e-17 95.1 60 73.3
CAN.G1328.7 Capsicum annuum HOM05D003810 ORTHO05D004416 1.2e-16 92.8 92 55.4
SHI21696 Sapria himalayana HOM05D003810 ORTHO05D004416 1.6e-16 92.4 108 49.1
CAN.G1057.19 Capsicum annuum HOM05D000222 ORTHO05D004416 7.8e-16 90.1 93 52.7
CAN.G289.45 Capsicum annuum HOM05D002177 ORTHO05D004416 2.9e-15 88.2 96 50.0
SalBow3G0229 Salvia bowleyana HOM05D003810 ORTHO05D004416 5.0e-15 87.4 74 59.5
PRCOL_00004489 Prasinoderma coloniale HOM05D003810 ORTHO05D004416 1.1e-14 86.3 346 27.7
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 1.5e-14 85.9 94 53.2
SHI21692 Sapria himalayana HOM05D003810 ORTHO05D004416 7.3e-14 83.6 152 34.9
Sabra05G0051600 Salix brachista HOM05D003810 ORTHO05D004416 1.2e-13 82.8 319 27.9
MCO14G434 Micromonas commoda HOM05D003810 ORTHO05D004416 1.4e-12 79.3 380 25.5
Actinidia36698 Actinidia chinensis HOM05D004019 ORTHO05D005136 7.5e-11 73.6 136 39.7
CAN.G11.19 Capsicum annuum HOM05D003810 ORTHO05D004416 7.5e-11 73.6 56 62.5
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 2.2e-10 72.0 53 66.0
Lsat_1_v5_gn_2_75840 Lactuca sativa HOM05D001134 ORTHO05D004416 4.1e-09 67.8 127 37.8
CDE07G1690 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 7.0e-09 67.0 197 31.5
CAN.G1034.2 Capsicum annuum HOM05D000222 ORTHO05D011077 1.2e-08 66.2 242 27.7
Cre10.g466550 Chlamydomonas reinhardtii HOM05D003810 ORTHO05D004416 2.0e-08 65.5 226 27.0
Nitab4.5_0001303g0160 Nicotiana tabacum HOM05D003810 ORTHO05D004416 7.8e-08 63.5 212 30.2
MD08G1246200 Malus domestica HOM05D003810 ORTHO05D004416 3.0e-07 61.6 68 51.5
Mapoly0063s0044 Marchantia polymorpha HOM05D003810 ORTHO05D004416 3.3e-06 58.2 48 58.3
A07p35570 Brassica napus HOM05D003810 ORTHO05D004416 5.6e-06 57.4 54 57.4
BraA07t31145Z Brassica rapa HOM05D003810 ORTHO05D004416 5.6e-06 57.4 54 57.4


User provided reference genes

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