Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09024 Vaccinium macrocarpon HOM05D001698 ORTHO05D001805 6.2e-55 217.2 112 100.0
CSS0022304 Camellia sinensis var. sinensis HOM05D001698 ORTHO05D001805 6.5e-28 127.5 106 64.2
CSS0009166 Camellia sinensis var. sinensis HOM05D001698 ORTHO05D001805 4.2e-27 124.8 110 60.0
Actinidia38158 Actinidia chinensis HOM05D001698 ORTHO05D001805 3.3e-24 115.2 115 49.6
Nitab4.5_0006081g0010 Nicotiana tabacum HOM05D001698 ORTHO05D001805 1.6e-18 96.3 95 51.6
Potri.016G037300 Populus trichocarpa HOM05D001698 ORTHO05D001805 2.1e-18 95.9 104 54.8
GSVIVG01033618001 Vitis vinifera HOM05D001698 ORTHO05D001805 2.1e-18 95.9 95 50.5
Nitab4.5_0001167g0080 Nicotiana tabacum HOM05D001698 ORTHO05D001805 6.7e-17 90.9 101 48.5
Sabra06G0025500 Salix brachista HOM05D001698 ORTHO05D001805 6.7e-17 90.9 96 53.1
Potri.006G037600 Populus trichocarpa HOM05D001698 ORTHO05D001805 2.0e-16 89.4 104 52.9
Dinv09479 Davidia involucrata HOM05D001698 ORTHO05D001805 2.6e-16 89.0 98 53.1
Oeu063777.1 Olea europaea HOM05D001698 ORTHO05D001805 2.6e-16 89.0 104 42.3
Dinv12050 Davidia involucrata HOM05D001698 ORTHO05D001805 4.4e-16 88.2 84 54.8
Nitab4.5_0000571g0190 Nicotiana tabacum HOM05D001698 ORTHO05D001805 2.2e-15 85.9 85 49.4
Prupe.7G040100 Prunus persica HOM05D001698 ORTHO05D001805 2.8e-15 85.5 104 46.2
Nn7g36675 Nelumbo nucifera HOM05D001698 ORTHO05D001805 3.7e-15 85.1 99 45.5
Peaxi162Scf00772g00076 Petunia axillaris HOM05D001698 ORTHO05D001805 3.7e-15 85.1 107 43.9
Potri.006G037200 Populus trichocarpa HOM05D001698 ORTHO05D001805 6.3e-15 84.3 96 49.0
Hma1.2p1_0553F.1_g177780 Hydrangea macrophylla HOM05D001698 ORTHO05D001805 8.2e-15 84.0 75 60.0
Solyc10g079650.2 Solanum lycopersicum HOM05D001698 ORTHO05D001805 8.2e-15 84.0 102 43.1
GSVIVG01034621001 Vitis vinifera HOM05D001698 ORTHO05D001805 1.1e-14 83.6 78 53.8
Sabra06G0025300 Salix brachista HOM05D001698 ORTHO05D001805 4.1e-14 81.6 96 49.0
Sopen10g030290 Solanum pennellii HOM05D001698 ORTHO05D001805 7.0e-14 80.9 102 42.2
TAR623G0359 Trochodendron aralioides HOM05D001698 ORTHO05D001805 7.0e-14 80.9 98 42.9
QL08p016010 Quercus lobata HOM05D001698 ORTHO05D001805 1.6e-13 79.7 96 46.9
GSVIVG01027323001 Vitis vinifera HOM05D001698 ORTHO05D001805 2.0e-13 79.3 81 50.6
CAN.G641.58 Capsicum annuum HOM05D001698 ORTHO05D001805 2.7e-13 79.0 103 40.8
Prupe.7G039900 Prunus persica HOM05D001698 ORTHO05D001805 3.5e-13 78.6 94 45.7
DCAR_020561 Daucus carota HOM05D001698 ORTHO05D001805 4.5e-13 78.2 110 37.3
QL08p015482 Quercus lobata HOM05D001698 ORTHO05D001805 4.5e-13 78.2 99 47.5
MD14G1086500 Malus domestica HOM05D001698 ORTHO05D001805 5.9e-13 77.8 94 47.9
FAN15G1141 Fragaria x ananassa HOM05D001698 ORTHO05D001805 7.7e-13 77.4 103 45.6
Sopen10g030300 Solanum pennellii HOM05D003266 ORTHO05D003718 7.7e-13 77.4 106 40.6
arahy.Tifrunner.gnm1.ann1.H3TEND Arachis hypogaea HOM05D001698 ORTHO05D001805 1.0e-12 77.0 80 48.8
PSO384G0562 Papaver somniferum HOM05D001698 ORTHO05D001805 1.0e-12 77.0 115 38.3
Atru.chr1.1450 Acer truncatum HOM05D001698 ORTHO05D001805 1.3e-12 76.6 111 42.3
Peaxi162Scf00772g00048 Petunia axillaris HOM05D001698 ORTHO05D001805 1.7e-12 76.3 108 41.7
Prupe.7G039800 Prunus persica HOM05D001698 ORTHO05D001805 2.2e-12 75.9 96 44.8
Cfa020009 Carpinus fangiana HOM05D001698 ORTHO05D001805 2.9e-12 75.5 94 50.0
Haze_20216 Corylus avellana HOM05D001698 ORTHO05D001805 2.9e-12 75.5 94 47.9
Haze_20218 Corylus avellana HOM05D001698 ORTHO05D001805 2.9e-12 75.5 94 47.9
FvH4_2g11650 Fragaria vesca HOM05D001698 ORTHO05D001805 5.0e-12 74.7 101 44.6
PSO339G3446 Papaver somniferum HOM05D001698 ORTHO05D001805 5.0e-12 74.7 105 41.0
COL.COLO4_07588 Corchorus olitorius HOM05D001698 ORTHO05D001805 6.5e-12 74.3 96 44.8
Haze_20220 Corylus avellana HOM05D001698 ORTHO05D001805 6.5e-12 74.3 107 44.9
Cfa020011 Carpinus fangiana HOM05D001698 ORTHO05D001805 1.1e-11 73.6 107 43.9
CiPaw.09G047100 Carya illinoinensis HOM05D001698 ORTHO05D001805 1.1e-11 73.6 109 40.4
FAN24G2962 Fragaria x ananassa HOM05D001698 ORTHO05D001805 1.1e-11 73.6 101 44.6
Lj1A1094T41 Lonicera japonica HOM05D001698 ORTHO05D001805 1.1e-11 73.6 87 49.4
Manes.08G058700 Manihot esculenta HOM05D001698 ORTHO05D001805 1.1e-11 73.6 94 43.6
RcHm_v2.0_Chr6g0270891 Rosa chinensis HOM05D001698 ORTHO05D001805 1.5e-11 73.2 101 43.6
COL.COLO4_07587 Corchorus olitorius HOM05D001698 ORTHO05D001805 1.9e-11 72.8 96 45.8
Haze_09539 Corylus avellana HOM05D001698 ORTHO05D001805 1.9e-11 72.8 105 45.7
Glyma.03G130400 Glycine max HOM05D001698 ORTHO05D001805 2.5e-11 72.4 104 43.3
Lalb_Chr25g0286961 Lupinus albus HOM05D001698 ORTHO05D001805 2.5e-11 72.4 100 45.0
CAN.G641.59 Capsicum annuum HOM05D001698 ORTHO05D001805 3.2e-11 72.0 106 36.8
CiPaw.11G177100 Carya illinoinensis HOM05D001698 ORTHO05D001805 3.2e-11 72.0 102 45.1
Lalb_Chr25g0286951 Lupinus albus HOM05D001698 ORTHO05D001805 4.2e-11 71.6 103 42.7
Medtr1g048720 Medicago truncatula HOM05D001698 ORTHO05D001805 4.2e-11 71.6 95 43.2
Cc06_g19110 Coffea canephora HOM05D001698 ORTHO05D001805 7.2e-11 70.9 89 42.7
Peaxi162Scf00772g00410 Petunia axillaris HOM05D001698 ORTHO05D001805 9.4e-11 70.5 84 45.2
Cfa020502 Carpinus fangiana HOM05D001698 ORTHO05D001805 1.2e-10 70.1 101 44.6
CiPaw.10G039600 Carya illinoinensis HOM05D001698 ORTHO05D001805 1.2e-10 70.1 100 47.0
Solyc10g079660.3 Solanum lycopersicum HOM05D001698 ORTHO05D036889 1.6e-10 69.7 84 45.2
Eucgr.A02250 Eucalyptus grandis HOM05D001698 ORTHO05D001805 2.1e-10 69.3 114 37.7
Lalb_Chr20g0110191 Lupinus albus HOM05D001698 ORTHO05D001805 2.1e-10 69.3 105 41.9
Medtr1g048710 Medicago truncatula HOM05D001698 ORTHO05D001805 2.1e-10 69.3 93 44.1
Solyc10g079680.3 Solanum lycopersicum HOM05D001698 ORTHO05D001805 2.1e-10 69.3 78 43.6
TPR.G19138 Trifolium pratense HOM05D001698 ORTHO05D001805 2.1e-10 69.3 95 43.2
MSTRG.19813 Avicennia marina HOM05D001698 ORTHO05D001805 2.7e-10 68.9 109 36.7
Ca_26784_v3 Cicer arietinum L. HOM05D001698 ORTHO05D001805 2.7e-10 68.9 105 39.0
COL.COLO4_07589 Corchorus olitorius HOM05D001698 ORTHO05D001805 4.7e-10 68.2 96 43.8
Nitab4.5_0004773g0010 Nicotiana tabacum HOM05D001698 ORTHO05D001805 4.7e-10 68.2 91 44.0
QL07p009901 Quercus lobata HOM05D001698 ORTHO05D001805 6.1e-10 67.8 113 38.1
Sed0013012 Sechium edule HOM05D001698 ORTHO05D001805 6.1e-10 67.8 84 48.8
Atru.chr1.1451 Acer truncatum HOM05D001698 ORTHO05D001805 1.0e-09 67.0 84 42.9
Cpa.g.sc5.179 Carica papaya HOM05D001698 ORTHO05D001805 1.0e-09 67.0 101 36.6
Prupe.7G040300 Prunus persica HOM05D001698 ORTHO05D001805 1.0e-09 67.0 108 40.7
Glyma.03G130600 Glycine max HOM05D001698 ORTHO05D001805 1.4e-09 66.6 98 40.8
Sed0024572 Sechium edule HOM05D001698 ORTHO05D001805 1.4e-09 66.6 93 45.2
Lj1g0024560 Lotus japonicus HOM05D001698 ORTHO05D001805 1.8e-09 66.2 107 37.4
MD14G1086600 Malus domestica HOM05D001698 ORTHO05D001805 1.8e-09 66.2 98 41.8
SalBow6G1767 Salvia bowleyana HOM05D001698 ORTHO05D001805 1.8e-09 66.2 107 33.6
Aqoxy2G00372 Aquilegia oxysepala HOM05D001698 ORTHO05D001805 2.3e-09 65.9 96 40.6
Duzib093G1883 Durio zibethinus HOM05D001698 ORTHO05D001805 2.3e-09 65.9 79 41.8
FvH4_7g03950 Fragaria vesca HOM05D001698 ORTHO05D001805 3.0e-09 65.5 100 41.0
Psat6g049440 Pisum sativum HOM05D001698 ORTHO05D001805 3.0e-09 65.5 86 41.9
CANSAT64G2931 Cannabis sativa HOM05D001698 ORTHO05D001805 4.0e-09 65.1 86 45.3
TPR.G32716 Trifolium pratense HOM05D001698 ORTHO05D001805 4.0e-09 65.1 103 40.8
AUR62031986 Chenopodium quinoa HOM05D001698 ORTHO05D001805 5.2e-09 64.7 81 39.5
FAN06G1474 Fragaria x ananassa HOM05D001698 ORTHO05D001805 5.2e-09 64.7 100 40.0
TWI77G0006 Tripterygium wilfordii HOM05D001698 ORTHO05D001805 5.2e-09 64.7 101 42.6
Phvul.001G126400 Phaseolus vulgaris HOM05D001698 ORTHO05D001805 6.8e-09 64.3 103 40.8
Haze_20211 Corylus avellana HOM05D001698 ORTHO05D001805 8.8e-09 63.9 100 39.0
Migut.J01664 Erythranthe guttata HOM05D001698 ORTHO05D001805 1.5e-08 63.2 91 34.1
Medtr7g090410 Medicago truncatula HOM05D001698 ORTHO05D001805 1.5e-08 63.2 91 40.7
Thecc.09G233200 Theobroma cacao HOM05D001698 ORTHO05D001805 1.5e-08 63.2 97 40.2
Aqoxy2G00373 Aquilegia oxysepala HOM05D001698 ORTHO05D001805 2.0e-08 62.8 109 36.7
DCAR_020568 Daucus carota HOM05D001698 ORTHO05D001805 2.0e-08 62.8 92 42.4
VMungo1383G1215 Vigna mungo HOM05D001698 ORTHO05D001805 2.0e-08 62.8 103 40.8
Gorai.006G120300 Gossypium raimondii HOM05D001698 ORTHO05D001805 2.6e-08 62.4 117 41.0
Medtr1g048750 Medicago truncatula HOM05D001698 ORTHO05D001805 3.4e-08 62.0 75 50.7
PGR031G2314 Punica granatum HOM05D001698 ORTHO05D001805 3.4e-08 62.0 63 57.1
CANSAT64G2277 Cannabis sativa HOM05D001698 ORTHO05D001805 4.4e-08 61.6 100 39.0
CARHR167120 Cardamine hirsuta HOM05D001698 ORTHO05D001805 4.4e-08 61.6 108 35.2
Haze_20215 Corylus avellana HOM05D001698 ORTHO05D001805 4.4e-08 61.6 100 38.0
Hund24597 Selenicereus undatus HOM05D001698 ORTHO05D001805 4.4e-08 61.6 94 35.1
Aqoxy4G00497 Aquilegia oxysepala HOM05D001698 ORTHO05D001805 5.7e-08 61.2 107 35.5
AUR62018341 Chenopodium quinoa HOM05D001698 ORTHO05D001805 7.5e-08 60.8 84 39.3
Gohir.A05G069200 Gossypium hirsutum HOM05D001698 ORTHO05D001805 7.5e-08 60.8 75 46.7
Oeu008221.1 Olea europaea HOM05D001698 ORTHO05D001805 7.5e-08 60.8 87 39.1
AT3G56970 Arabidopsis thaliana HOM05D001698 ORTHO05D001805 9.8e-08 60.5 92 37.0
Carub.0005s2371 Capsella rubella HOM05D001698 ORTHO05D001805 9.8e-08 60.5 101 34.7
EL10Ac3g07228 Beta vulgaris HOM05D001698 ORTHO05D001805 1.3e-07 60.1 81 35.8
AL4G39220 Arabidopsis lyrata HOM05D001698 ORTHO05D001805 1.7e-07 59.7 106 35.8
BcaB02g08339 Brassica carinata HOM05D001698 ORTHO05D001805 1.7e-07 59.7 101 33.7
RcHm_v2.0_Chr1g0321521 Rosa chinensis HOM05D001698 ORTHO05D001805 1.7e-07 59.7 83 48.2
Sp5g05610 Schrenkiella parvula HOM05D001698 ORTHO05D001805 1.7e-07 59.7 101 35.6
AT2G41240 Arabidopsis thaliana HOM05D001698 ORTHO05D001805 2.2e-07 59.3 80 40.0
AT3G56980 Arabidopsis thaliana HOM05D001698 ORTHO05D001805 2.2e-07 59.3 92 38.0
BolC4t25247H Brassica oleracea HOM05D001698 ORTHO05D001805 2.2e-07 59.3 97 37.1
AUR62030330 Chenopodium quinoa HOM05D001698 ORTHO05D001805 2.2e-07 59.3 78 38.5
Thhalv10006491m.g Eutrema salsugineum HOM05D001698 ORTHO05D001805 2.2e-07 59.3 101 35.6
CARHR136330 Cardamine hirsuta HOM05D001698 ORTHO05D001805 2.8e-07 58.9 81 40.7
Gorai.009G073100 Gossypium raimondii HOM05D001698 ORTHO05D001805 2.8e-07 58.9 75 45.3
Lj1g0017441 Lotus japonicus HOM05D001698 ORTHO05D001805 2.8e-07 58.9 93 40.9
AUR62030326 Chenopodium quinoa HOM05D001698 ORTHO05D001805 3.7e-07 58.5 84 36.9
Gohir.D09G103200 Gossypium hirsutum HOM05D001698 ORTHO05D001805 3.7e-07 58.5 86 47.7
TWI53G2092 Tripterygium wilfordii HOM05D001698 ORTHO05D001805 3.7e-07 58.5 95 35.8
BcaB02g08338 Brassica carinata HOM05D001698 ORTHO05D001805 4.8e-07 58.2 93 37.6
BcaC02g09883 Brassica carinata HOM05D001698 ORTHO05D001805 4.8e-07 58.2 97 37.1
C04p35580 Brassica napus HOM05D001698 ORTHO05D001805 4.8e-07 58.2 97 37.1
BraA04t16068Z Brassica rapa HOM05D001698 ORTHO05D001805 4.8e-07 58.2 100 34.0
CiPaw.12G123000 Carya illinoinensis HOM05D001698 ORTHO05D001805 4.8e-07 58.2 112 39.3
Thhalv10017167m.g Eutrema salsugineum HOM05D001698 ORTHO05D001805 4.8e-07 58.2 74 41.9
THA.LOC104816108 Tarenaya hassleriana HOM05D001698 ORTHO05D001805 4.8e-07 58.2 91 36.3
EL10Ac3g07224 Beta vulgaris HOM05D001698 ORTHO05D001805 6.3e-07 57.8 81 35.8
A04p31440 Brassica napus HOM05D001698 ORTHO05D001805 6.3e-07 57.8 80 40.0
C04p68850 Brassica napus HOM05D001698 ORTHO05D001805 6.3e-07 57.8 80 40.0
BolC4t28389H Brassica oleracea HOM05D001698 ORTHO05D001805 6.3e-07 57.8 80 40.0
BraA04t18601Z Brassica rapa HOM05D001698 ORTHO05D001805 6.3e-07 57.8 80 40.0
CsaV3_4G029740 Cucumis sativus L. HOM05D001698 ORTHO05D001805 6.3e-07 57.8 80 46.2
Gohir.D05G072100 Gossypium hirsutum HOM05D001698 ORTHO05D001805 6.3e-07 57.8 97 39.2
CANSAT64G2975 Cannabis sativa HOM05D001698 ORTHO05D001805 8.3e-07 57.4 82 39.0
FAN03G2766 Fragaria x ananassa HOM05D001698 ORTHO05D001805 8.3e-07 57.4 88 39.8
Gohir.A09G106500 Gossypium hirsutum HOM05D001698 ORTHO05D001805 8.3e-07 57.4 119 40.3
Lj1P1092T11 Lonicera japonica HOM05D001698 ORTHO05D001805 8.3e-07 57.4 92 40.2
THA.LOC104824402 Tarenaya hassleriana HOM05D001698 ORTHO05D001805 8.3e-07 57.4 95 32.6
AL5G38430 Arabidopsis lyrata HOM05D001698 ORTHO05D001805 1.4e-06 56.6 107 35.5
BcaB02g08337 Brassica carinata HOM05D001698 ORTHO05D001805 1.4e-06 56.6 96 33.3
A04p03670 Brassica napus HOM05D001698 ORTHO05D001805 1.4e-06 56.6 100 33.0
PGSC0003DMG400029853 Solanum tuberosum HOM05D001698 ORTHO05D001805 1.4e-06 56.6 69 42.0
ClCG04G004360 Citrullus lanatus HOM05D001698 ORTHO05D001805 1.8e-06 56.2 63 55.6
MBI13_g17980_MAGBIO Magnolia biondii HOM05D001698 ORTHO05D001805 1.8e-06 56.2 94 37.2
A04p03650 Brassica napus HOM05D001698 ORTHO05D001805 2.4e-06 55.8 97 35.1
BraA04t16070Z Brassica rapa HOM05D001698 ORTHO05D001805 2.4e-06 55.8 97 35.1
CARHR167130 Cardamine hirsuta HOM05D001698 ORTHO05D001805 2.4e-06 55.8 107 35.5
Carub.0005s2372 Capsella rubella HOM05D001698 ORTHO05D001805 3.1e-06 55.5 107 37.4
MELO3C019065.2 Cucumis melo HOM05D001698 ORTHO05D001805 3.1e-06 55.5 80 45.0
Gohir.D11G322900 Gossypium hirsutum HOM05D001698 ORTHO05D001805 3.1e-06 55.5 101 37.6
Hund24599 Selenicereus undatus HOM05D001698 ORTHO05D001805 3.1e-06 55.5 95 33.7
AUR62031984 Chenopodium quinoa HOM05D001698 ORTHO05D001805 4.1e-06 55.1 106 34.0
BcaB02g07629 Brassica carinata HOM05D001698 ORTHO05D001805 5.4e-06 54.7 106 34.9
BcaC02g09884 Brassica carinata HOM05D001698 ORTHO05D001805 5.4e-06 54.7 69 39.1
A05p02160 Brassica napus HOM05D001698 ORTHO05D001805 5.4e-06 54.7 80 37.5
BraA05t19212Z Brassica rapa HOM05D001698 ORTHO05D001805 5.4e-06 54.7 80 37.5
Thhalv10006191m.g Eutrema salsugineum HOM05D001698 ORTHO05D001805 5.4e-06 54.7 99 33.3
Gorai.007G353000 Gossypium raimondii HOM05D001698 ORTHO05D001805 5.4e-06 54.7 101 37.6
Aa31LG10G11850 Aethionema arabicum HOM05D001698 ORTHO05D001805 7.0e-06 54.3 96 35.4
A04p03660 Brassica napus HOM05D001698 ORTHO05D001805 7.0e-06 54.3 78 35.9
Oeu008219.1 Olea europaea HOM05D001698 ORTHO05D001805 7.0e-06 54.3 71 43.7
Oeu008222.1 Olea europaea HOM05D001698 ORTHO05D001805 7.0e-06 54.3 88 40.9
Sc25g0005420 Simmondsia chinensis HOM05D001698 ORTHO05D001805 7.0e-06 54.3 93 38.7
BcaC02g09887 Brassica carinata HOM05D001698 ORTHO05D001805 9.1e-06 53.9 96 35.4
BcaC02g09890 Brassica carinata HOM05D001698 ORTHO05D001805 9.1e-06 53.9 96 34.4
C04p35500 Brassica napus HOM05D001698 ORTHO05D001805 9.1e-06 53.9 96 34.4
C04p35520 Brassica napus HOM05D001698 ORTHO05D001805 9.1e-06 53.9 96 35.4
BolC4t25101H Brassica oleracea HOM05D000302 ORTHO05D000334 9.1e-06 53.9 96 34.4
BolC4t25107H Brassica oleracea HOM05D001698 ORTHO05D001805 9.1e-06 53.9 96 35.4
CANSAT64G0196 Cannabis sativa HOM05D001698 ORTHO05D001805 9.1e-06 53.9 67 41.8
Lj1g0019186 Lotus japonicus HOM05D001698 ORTHO05D001805 9.1e-06 53.9 72 45.8


User provided reference genes

Program Settings