Gene: AT2G41240

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G41240
  • Transcript Identifier AT2G41240.1
  • Gene Type Coding gene
  • Location Chr2 : 17198331-17199320 : negative

Gene Family Information

  • ID HOM05D001698
  • #Genes/#Species 381/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G41240.1
  • symbol BHLH100
  • uniprot Q9ZVB5

Descriptions

  • Description basic helix-loop-helix protein 100
  • Computational description basic helix-loop-helix protein 100 (BHLH100); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Achaete-scute transcription factor related (InterPro:IPR015660), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G56970.1); Has 1014 Blast hits to 1014 proteins in 111 species: Archae - 0; Bacteria - 2; Metazoa - 217; Fungi - 10; Plants - 760; Viruses - 12; Other Eukaryotes - 13 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene Os01g0952800
GO:0071731
ISO
PLAZA Integrative Orthologyresponse to nitric oxide Os01g0952800
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion Os01g0952800
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway Os01g0952800
GO:0046685
ISO
PLAZA Integrative Orthologyresponse to arsenic-containing substance Os01g0952800
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated Os01g0952800
GO:1990641
ISO
PLAZA Integrative Orthologyresponse to iron ion starvation Os01g0952800
GO:1900706
ISO
PLAZA Integrative Orthologypositive regulation of siderophore biosynthetic process Os01g0952800
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0055072
IGI
Gene Ontologyiron ion homeostasis2
GO:0009414
IEP
Gene Ontologyresponse to water deprivation3
GO:0010106
IEP
Gene Ontologycellular response to iron ion starvation4
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity5
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific1
GO:0000977
IBA
Gene OntologyRNA polymerase II transcription regulatory region sequence-specific DNA binding1
GO:0005515
IPI
Gene Ontologyprotein binding6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0090575
IBA
Gene OntologyRNA polymerase II transcription regulator complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 Achaete-scute transcription factor-related
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
25.4.2.1.6 Nutrient uptake.metal homeostasis.iron.regulation.bHLH-Ib-class iron/copper homeostasis regulator
25.4.3.1.3 Nutrient uptake.metal homeostasis.copper.regulation.bHLH-Ib-class iron/copper homeostasis regulator