Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08814 Vaccinium macrocarpon HOM05D000904 ORTHO05D048482 2.3e-68 262.3 151 100.0
CSS0034059 Camellia sinensis var. sinensis HOM05D000904 ORTHO05D001801 2.0e-40 169.5 152 70.4
Rhsim04G0136300 Rhododendron simsii HOM05D000904 ORTHO05D001801 1.8e-36 156.4 151 63.6
Dinv19822 Davidia involucrata HOM05D000904 ORTHO05D001801 3.6e-29 132.1 159 57.2
Dinv21264 Davidia involucrata HOM05D000904 ORTHO05D001801 1.9e-22 109.8 156 55.8
DCAR_020780 Daucus carota HOM05D000904 ORTHO05D001801 3.6e-21 105.5 159 52.2
vmacro07368 Vaccinium macrocarpon HOM05D000904 ORTHO05D001801 2.3e-20 102.8 156 57.1
TAR623G1115 Trochodendron aralioides HOM05D000904 ORTHO05D001801 3.0e-20 102.4 161 52.8
vmacro14375 Vaccinium macrocarpon HOM05D000904 ORTHO05D001801 3.9e-20 102.1 162 50.6
Manes.08G020350 Manihot esculenta HOM05D000904 ORTHO05D001801 5.2e-20 101.7 129 58.9
Hma1.2p1_0651F.1_g195810 Hydrangea macrophylla HOM05D000904 ORTHO05D001801 6.7e-20 101.3 159 52.8
PSO063G4017 Papaver somniferum HOM05D000904 ORTHO05D001801 6.7e-20 101.3 150 54.0
Rhsim03G0081800 Rhododendron simsii HOM05D000904 ORTHO05D001801 2.0e-19 99.8 155 52.9
PSO339G6198 Papaver somniferum HOM05D000904 ORTHO05D001801 1.7e-18 96.7 150 52.0
Potri.006G116700 Populus trichocarpa HOM05D000904 ORTHO05D001801 3.7e-18 95.5 135 51.9
Actinidia11330 Actinidia chinensis HOM05D000904 ORTHO05D001801 4.8e-18 95.1 161 49.1
ECA238G3788 Erigeron canadensis HOM05D000904 ORTHO05D001801 8.2e-18 94.4 157 50.3
Phvul.001G186200 Phaseolus vulgaris HOM05D000904 ORTHO05D001801 1.4e-17 93.6 141 53.2
Manes.09G060572 Manihot esculenta HOM05D000904 ORTHO05D001801 3.1e-17 92.4 139 50.4
VMungo1383G0204 Vigna mungo HOM05D000904 ORTHO05D001801 3.1e-17 92.4 141 51.1
Haze_23457 Corylus avellana HOM05D000904 ORTHO05D001801 4.1e-17 92.0 159 49.1
Solyc10g083640.2 Solanum lycopersicum HOM05D000904 ORTHO05D001801 7.0e-17 91.3 122 57.4
Ciclev10012216m.g Citrus clementina HOM05D000904 ORTHO05D001801 1.2e-16 90.5 155 51.0
TAR636G0528 Trochodendron aralioides HOM05D000904 ORTHO05D001801 1.2e-16 90.5 161 49.1
TAR636G2699 Trochodendron aralioides HOM05D000904 ORTHO05D001801 1.2e-16 90.5 161 49.1
arahy.Tifrunner.gnm1.ann1.A0F858 Arachis hypogaea HOM05D000904 ORTHO05D001801 1.6e-16 90.1 156 48.1
Atru.chr8.1642 Acer truncatum HOM05D000904 ORTHO05D001801 2.6e-16 89.4 147 47.6
Cfa010086 Carpinus fangiana HOM05D000904 ORTHO05D001801 3.5e-16 89.0 159 48.4
Sabra06G0091000 Salix brachista HOM05D000904 ORTHO05D001801 4.5e-16 88.6 135 51.1
CSS0034231 Camellia sinensis var. sinensis HOM05D000904 ORTHO05D001801 5.9e-16 88.2 156 50.0
HanXRQChr06g0183031 Helianthus annuus HOM05D000904 ORTHO05D001801 5.9e-16 88.2 155 49.7
Glyma.19G191100 Glycine max HOM05D000904 ORTHO05D001801 1.7e-15 86.7 135 49.6
Lj3A1004G90 Lonicera japonica HOM05D000904 ORTHO05D001801 1.7e-15 86.7 82 75.6
Lalb_Chr21g0315691 Lupinus albus HOM05D000904 ORTHO05D048482 2.9e-15 85.9 129 55.0
Lalb_Chr21g0315711 Lupinus albus HOM05D000904 ORTHO05D001801 2.9e-15 85.9 129 55.0
MBI17_g30588_MAGBIO Magnolia biondii HOM05D000904 ORTHO05D001801 2.9e-15 85.9 157 45.9
ECA248G2699 Erigeron canadensis HOM05D000904 ORTHO05D001801 3.8e-15 85.5 160 45.6
Peaxi162Scf00110g01922 Petunia axillaris HOM05D000904 ORTHO05D001801 3.8e-15 85.5 118 56.8
unitig_8.g3291 Utricularia gibba HOM05D000904 ORTHO05D001801 5.0e-15 85.1 110 57.3
CiPaw.13G141300 Carya illinoinensis HOM05D000904 ORTHO05D001801 3.2e-14 82.4 156 47.4
CiPaw.09G008100 Carya illinoinensis HOM05D000904 ORTHO05D001801 7.2e-14 81.3 148 47.3
MD14G1014800 Malus domestica HOM05D000904 ORTHO05D001801 9.4e-14 80.9 123 54.5
SalBow3G0056 Salvia bowleyana HOM05D000904 ORTHO05D001801 9.4e-14 80.9 156 45.5
Lj1g0014738 Lotus japonicus HOM05D000904 ORTHO05D001801 1.6e-13 80.1 138 55.1
ATR0820G024 Amborella trichopoda HOM05D000904 ORTHO05D001801 2.1e-13 79.7 121 55.4
Eucgr.B03897 Eucalyptus grandis HOM05D000904 ORTHO05D001801 2.1e-13 79.7 164 46.3
QL10p041408 Quercus lobata HOM05D000904 ORTHO05D001801 3.6e-13 79.0 133 54.9
AUR62033586 Chenopodium quinoa HOM05D000904 ORTHO05D001801 4.7e-13 78.6 145 49.0
AUR62041413 Chenopodium quinoa HOM05D000904 ORTHO05D001801 4.7e-13 78.6 145 49.0
HanXRQChr01g0028321 Helianthus annuus HOM05D000904 ORTHO05D001801 4.7e-13 78.6 113 54.9
MD03G1134200 Malus domestica HOM05D000904 ORTHO05D001801 4.7e-13 78.6 140 48.6
CiPaw.10G004900 Carya illinoinensis HOM05D000904 ORTHO05D001801 6.1e-13 78.2 165 43.0
Nn6g35063 Nelumbo nucifera HOM05D000904 ORTHO05D001801 6.1e-13 78.2 75 66.7
unitig_22.g6647 Utricularia gibba HOM05D000904 ORTHO05D001801 1.4e-12 77.0 158 44.9
Aqoxy1G00953 Aquilegia oxysepala HOM05D000904 ORTHO05D001801 1.8e-12 76.6 158 46.8
Thecc.09G292500 Theobroma cacao HOM05D000904 ORTHO05D001801 2.3e-12 76.3 149 50.3
Sc02g0001160 Simmondsia chinensis HOM05D000904 ORTHO05D001801 4.0e-12 75.5 144 47.9
CSS0023799 Camellia sinensis var. sinensis HOM05D000904 ORTHO05D001801 1.2e-11 73.9 119 51.3
Lalb_Chr20g0112211 Lupinus albus HOM05D000904 ORTHO05D001801 1.5e-11 73.6 122 50.0
Peaxi162Scf00757g00113 Petunia axillaris HOM05D000904 ORTHO05D001801 1.5e-11 73.6 158 44.3
Glyma.03G190600 Glycine max HOM05D000904 ORTHO05D001801 2.6e-11 72.8 135 46.7
Nitab4.5_0000227g0160 Nicotiana tabacum HOM05D000904 ORTHO05D001801 2.6e-11 72.8 156 43.6
Aqoxy2G01520 Aquilegia oxysepala HOM05D000904 ORTHO05D001801 3.3e-11 72.4 115 50.4
CAN.G386.32 Capsicum annuum HOM05D000904 ORTHO05D001801 4.4e-11 72.0 159 46.5
FAN09G2644 Fragaria x ananassa HOM05D000904 ORTHO05D001801 4.4e-11 72.0 120 49.2
SEGI_05357 Sequoiadendron giganteum HOM05D000904 ORTHO05D001801 9.7e-11 70.9 116 54.3
FAN02G4341 Fragaria x ananassa HOM05D000904 ORTHO05D001801 1.3e-10 70.5 121 47.1
TWI77G0099 Tripterygium wilfordii HOM05D000904 ORTHO05D001801 1.3e-10 70.5 145 45.5
DCAR_015481 Daucus carota HOM05D000904 ORTHO05D001801 1.7e-10 70.1 148 42.6
CAN.G1138.10 Capsicum annuum HOM05D000904 ORTHO05D001801 2.2e-10 69.7 114 51.8
PSO339G6544 Papaver somniferum HOM05D000904 ORTHO05D001801 2.2e-10 69.7 162 47.5
Sopen10g033110 Solanum pennellii HOM05D000904 ORTHO05D001801 2.2e-10 69.7 123 49.6
MSTRG.5805 Avicennia marina HOM05D000904 ORTHO05D001801 2.8e-10 69.3 159 45.9
Ca_08964_v3 Cicer arietinum L. HOM05D000904 ORTHO05D001801 2.8e-10 69.3 140 47.1
Gohir.A09G092500 Gossypium hirsutum HOM05D000904 ORTHO05D001801 3.7e-10 68.9 116 51.7
Gohir.D09G092600 Gossypium hirsutum HOM05D000904 ORTHO05D001801 4.8e-10 68.6 113 52.2
EL10Ac7g16999 Beta vulgaris HOM05D000904 ORTHO05D001801 6.3e-10 68.2 158 42.4
FvH4_6g17780 Fragaria vesca HOM05D000904 ORTHO05D001801 6.3e-10 68.2 121 47.1
FAN05G2934 Fragaria x ananassa HOM05D001017 ORTHO05D001025 6.3e-10 68.2 121 47.1
FAN05G3396 Fragaria x ananassa HOM05D000904 ORTHO05D001801 6.3e-10 68.2 121 47.1
Medtr7g103630 Medicago truncatula HOM05D000904 ORTHO05D001801 6.3e-10 68.2 143 42.0
MD11G1156400 Malus domestica HOM05D000904 ORTHO05D001801 8.2e-10 67.8 135 46.7
PGSC0003DMG400041656 Solanum tuberosum HOM05D000904 ORTHO05D001801 1.1e-09 67.4 128 48.4
Hund04067 Selenicereus undatus HOM05D000904 ORTHO05D001801 1.8e-09 66.6 161 41.6
Nitab4.5_0000132g0230 Nicotiana tabacum HOM05D000904 ORTHO05D001801 2.4e-09 66.2 122 45.9
RcHm_v2.0_Chr3g0472021 Rosa chinensis HOM05D000904 ORTHO05D001801 2.4e-09 66.2 121 45.5
COL.COLO4_19287 Corchorus olitorius HOM05D000904 ORTHO05D001801 3.1e-09 65.9 118 51.7
Lalb_Chr22g0350601 Lupinus albus HOM05D000904 ORTHO05D001801 3.1e-09 65.9 139 44.6
SGA_v2.0_scaffold93G28367 Striga asiatica HOM05D000904 ORTHO05D001801 3.1e-09 65.9 134 47.0
MD12G1016800 Malus domestica HOM05D000904 ORTHO05D001801 5.3e-09 65.1 121 48.8
MELO3C004799.2 Cucumis melo HOM05D000904 ORTHO05D001801 7.0e-09 64.7 119 47.9
MBI01_g39278_MAGBIO Magnolia biondii HOM05D000904 ORTHO05D001801 7.0e-09 64.7 130 42.3
TPR.G10244 Trifolium pratense HOM05D000904 ORTHO05D001801 7.0e-09 64.7 144 40.3
Cpa.g.sc47.49 Carica papaya HOM05D000904 ORTHO05D001801 9.1e-09 64.3 154 44.2
CANSAT80G1629 Cannabis sativa HOM05D000904 ORTHO05D001801 1.2e-08 63.9 168 38.7
FvH4_3g29970 Fragaria vesca HOM05D000904 ORTHO05D001801 1.6e-08 63.5 128 47.7
Cc06_g05170 Coffea canephora HOM05D000904 ORTHO05D001801 2.0e-08 63.2 113 52.2
HanXRQChr02g0055021 Helianthus annuus HOM05D000904 ORTHO05D001801 2.0e-08 63.2 131 45.8
Nitab4.5_0022223g0010 Nicotiana tabacum HOM05D000904 ORTHO05D001801 2.0e-08 63.2 107 48.6
TWI74G1116 Tripterygium wilfordii HOM05D000904 ORTHO05D001801 2.0e-08 63.2 138 42.8
arahy.Tifrunner.gnm1.ann1.07Q55L Arachis hypogaea HOM05D000904 ORTHO05D001801 2.7e-08 62.8 161 45.3
Thecc.09G292400 Theobroma cacao HOM05D000904 ORTHO05D001801 2.7e-08 62.8 151 44.4
Phvul.005G127800 Phaseolus vulgaris HOM05D000904 ORTHO05D001801 4.5e-08 62.0 112 48.2
Prupe.6G118600 Prunus persica HOM05D000904 ORTHO05D001801 4.5e-08 62.0 127 47.2
Sc12g0004120 Simmondsia chinensis HOM05D000904 ORTHO05D001801 4.5e-08 62.0 148 41.2
ECA233G3509 Erigeron canadensis HOM05D000340 ORTHO05D000677 5.9e-08 61.6 139 46.8
Gorai.006G109200 Gossypium raimondii HOM05D000904 ORTHO05D001801 5.9e-08 61.6 114 50.0
Ciclev10029043m.g Citrus clementina HOM05D000904 ORTHO05D001801 1.3e-07 60.5 158 43.7
Lj3g0004634 Lotus japonicus HOM05D000904 ORTHO05D001801 2.9e-07 59.3 144 43.1
MSTRG.12353 Avicennia marina HOM05D000904 ORTHO05D001801 3.8e-07 58.9 157 42.7
Sed0008858 Sechium edule HOM05D000904 ORTHO05D001801 3.8e-07 58.9 131 42.7
Aqoxy2G01430 Aquilegia oxysepala HOM05D000904 ORTHO05D001801 5.0e-07 58.5 160 41.2
Rhsim01G0208800 Rhododendron simsii HOM05D000904 ORTHO05D001801 5.0e-07 58.5 108 49.1
Haze_19530 Corylus avellana HOM05D000904 ORTHO05D001801 1.1e-06 57.4 174 36.8
Nitab4.5_0001453g0100 Nicotiana tabacum HOM05D000904 ORTHO05D001801 1.1e-06 57.4 136 44.1
QL07p040666 Quercus lobata HOM05D000904 ORTHO05D001801 1.1e-06 57.4 165 38.8
SGA_v2.0_scaffold40G15412 Striga asiatica HOM05D000904 ORTHO05D001801 1.1e-06 57.4 131 45.8
FAN11G2227 Fragaria x ananassa HOM05D000904 ORTHO05D001801 1.5e-06 57.0 136 44.9
FAN14G3478 Fragaria x ananassa HOM05D000904 ORTHO05D001801 1.9e-06 56.6 113 44.2
Oeu040544.2 Olea europaea HOM05D001017 ORTHO05D001025 1.9e-06 56.6 160 39.4
CDE02G4746 Ceratophyllum demersum HOM05D000904 ORTHO05D001801 3.2e-06 55.8 77 55.8
Phvul.005G127700 Phaseolus vulgaris HOM05D000904 ORTHO05D001801 4.2e-06 55.5 144 41.7
Duzib170G0329 Durio zibethinus HOM05D000904 ORTHO05D001801 5.5e-06 55.1 111 45.9
FAN16G0634 Fragaria x ananassa HOM05D000904 ORTHO05D001801 5.5e-06 55.1 147 43.5
Psat3g036760 Pisum sativum HOM05D000904 ORTHO05D001801 5.5e-06 55.1 61 59.0
PGSC0003DMG400028265 Solanum tuberosum HOM05D000904 ORTHO05D001801 5.5e-06 55.1 123 45.5
Peaxi162Scf00789g00529 Petunia axillaris HOM05D000904 ORTHO05D001801 9.4e-06 54.3 141 42.6


User provided reference genes

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