Gene: vmacro07368
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro07368
- Transcript Identifier vmacro07368-RA
- Gene Type Coding gene
- Location scaffold00230_Vaccinium_macrocarpon_Stevens_v1 : 491635-493682 : negative
Gene Family Information
- ID HOM05D000904
- #Genes/#Species 662/100
- Phylogenetic origin
- ID ORTHO05D001801
- #Genes/#Species 353/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id vmacro07368_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to U2AF35B: Splicing factor U2af small subunit B (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D000904 |
| GO:0046872 | ISO | PLAZA Homology (enrichment) | metal ion binding | HOM05D000904 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0089701 | IEA | InterPro | U2AF complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009145 | U2 auxiliary factor small subunit |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |