Gene: Nitab4.5_0000227g0160

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000227g0160
  • Transcript Identifier Nitab4.5_0000227g0160.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000227 : 661988-665470 : negative

Gene Family Information

  • ID HOM05D000904
  • #Genes/#Species 662/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000227g0160.1
  • SR1-identifier Nta00g14490.1

Descriptions

  • Description U2 auxiliary factor small subunit, Zinc finger, CCCH-type, RNA recognition motif domain, eukaryote, Nucleotide-binding, alpha-beta plait, RNA recognition motif domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0089701
IEA
InterProU2AF complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003954 RNA recognition motif domain, eukaryote
IPR035979 RNA-binding domain superfamily
IPR000571 Zinc finger, CCCH-type
IPR009145 U2 auxiliary factor small subunit
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
16.2.1.2.11.1 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor heterodimer.small subunit U2AF1/U2AF35