Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05296 Vaccinium macrocarpon HOM05D000181 ORTHO05D029292 5.1e-38 160.6 83 100.0
ClCG05G015160 Citrullus lanatus HOM05D000181 ORTHO05D006419 1.6e-31 139.0 82 85.4
Dinv31928 Davidia involucrata HOM05D000181 ORTHO05D006419 1.6e-31 139.0 82 86.6
Actinidia15485 Actinidia chinensis HOM05D000181 ORTHO05D006419 2.1e-31 138.7 82 84.1
Cpa.g.sc26.216 Carica papaya HOM05D000181 ORTHO05D006419 2.1e-31 138.7 82 85.4
PGR031G3779 Punica granatum HOM05D000181 ORTHO05D006419 3.6e-31 137.9 82 85.4
Rhsim06G0008500 Rhododendron simsii HOM05D000181 ORTHO05D006419 3.6e-31 137.9 82 85.4
Zm00001eb272100 Zea mays HOM05D000181 ORTHO05D006419 3.6e-31 137.9 82 85.4
CSS0013964 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D006419 4.7e-31 137.5 82 85.4
CSS0045969 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D006419 4.7e-31 137.5 82 85.4
Hma1.2p1_0507F.1_g168360 Hydrangea macrophylla HOM05D000181 ORTHO05D006419 4.7e-31 137.5 82 84.1
GSVIVG01008686001 Vitis vinifera HOM05D000181 ORTHO05D006419 4.7e-31 137.5 82 84.1
Manes.05G135500 Manihot esculenta HOM05D000181 ORTHO05D006419 6.1e-31 137.1 82 85.4
Cc10_g00780 Coffea canephora HOM05D000181 ORTHO05D006419 7.9e-31 136.7 82 84.1
Os06g0725900 Oryza sativa ssp. japonica HOM05D000181 ORTHO05D006419 7.9e-31 136.7 82 85.4
CANSAT25G3075 Cannabis sativa HOM05D000181 ORTHO05D006419 1.0e-30 136.3 82 85.4
Ciclev10000422m.g Citrus clementina HOM05D000181 ORTHO05D006419 1.0e-30 136.3 82 85.4
Manes.18G006400 Manihot esculenta HOM05D000181 ORTHO05D006419 1.0e-30 136.3 82 85.4
Potri.002G012000 Populus trichocarpa HOM05D000181 ORTHO05D006419 1.0e-30 136.3 82 85.4
Sed0015820 Sechium edule HOM05D000181 ORTHO05D006419 1.4e-30 136.0 81 85.2
THA.LOC104804990 Tarenaya hassleriana HOM05D000181 ORTHO05D006419 1.4e-30 136.0 82 85.4
HPP92_012953 Vanilla planifolia HOM05D000181 ORTHO05D006419 1.4e-30 136.0 82 84.1
arahy.Tifrunner.gnm1.ann1.H4TEYY Arachis hypogaea HOM05D000181 ORTHO05D006419 1.8e-30 135.6 82 84.1
arahy.Tifrunner.gnm1.ann1.P30B2B Arachis hypogaea HOM05D000181 ORTHO05D006419 1.8e-30 135.6 82 84.1
arahy.Tifrunner.gnm1.ann1.VZ61JB Arachis hypogaea HOM05D000181 ORTHO05D006419 1.8e-30 135.6 82 84.1
MELO3C017011.2 Cucumis melo HOM05D000181 ORTHO05D006419 1.8e-30 135.6 82 82.9
Gohir.A05G180400 Gossypium hirsutum HOM05D000181 ORTHO05D006419 1.8e-30 135.6 82 84.1
Nn6g31759 Nelumbo nucifera HOM05D000181 ORTHO05D006419 1.8e-30 135.6 82 84.1
TWI12G0176 Tripterygium wilfordii HOM05D000181 ORTHO05D006419 1.8e-30 135.6 82 82.9
CiPaw.08G072200 Carya illinoinensis HOM05D000181 ORTHO05D006419 2.3e-30 135.2 82 82.9
COL.COLO4_21595 Corchorus olitorius HOM05D000181 ORTHO05D006419 2.3e-30 135.2 82 84.1
CsaV3_4G037130 Cucumis sativus L. HOM05D000181 ORTHO05D006419 2.3e-30 135.2 82 82.9
SGA_v2.0_scaffold25G11190 Striga asiatica HOM05D000181 ORTHO05D006419 2.3e-30 135.2 82 81.7
Thecc.08G057100 Theobroma cacao HOM05D000181 ORTHO05D006419 2.3e-30 135.2 82 84.1
Duzib093G0369 Durio zibethinus HOM05D000181 ORTHO05D006419 3.0e-30 134.8 82 84.1
Hund01758 Selenicereus undatus HOM05D000181 ORTHO05D006419 3.0e-30 134.8 82 82.9
Sc26g0004620 Simmondsia chinensis HOM05D000181 ORTHO05D006419 3.0e-30 134.8 82 82.9
unitig_748.g7712 Utricularia gibba HOM05D000181 ORTHO05D006419 3.0e-30 134.8 82 81.7
arahy.Tifrunner.gnm1.ann1.3UR6JB Arachis hypogaea HOM05D000181 ORTHO05D006419 3.9e-30 134.4 82 82.9
Lalb_Chr03g0033621 Lupinus albus HOM05D000181 ORTHO05D006419 3.9e-30 134.4 82 81.7
QL02p013883 Quercus lobata HOM05D000181 ORTHO05D006419 3.9e-30 134.4 82 82.9
Aa31LG9G12390 Aethionema arabicum HOM05D000181 ORTHO05D006419 5.1e-30 134.0 82 81.7
MSTRG.25296 Avicennia marina HOM05D000181 ORTHO05D006419 5.1e-30 134.0 82 82.9
Eucgr.F01206 Eucalyptus grandis HOM05D000181 ORTHO05D006419 5.1e-30 134.0 82 80.5
Atru.chr13.158 Acer truncatum HOM05D000181 ORTHO05D006419 6.7e-30 133.7 82 81.7
Cfa014054 Carpinus fangiana HOM05D000181 ORTHO05D006419 6.7e-30 133.7 82 82.9
CiPaw.07G140000 Carya illinoinensis HOM05D000181 ORTHO05D006419 6.7e-30 133.7 82 82.9
Haze_22752 Corylus avellana HOM05D000181 ORTHO05D006419 6.7e-30 133.7 82 82.9
Glyma.06G019400 Glycine max HOM05D000181 ORTHO05D006419 6.7e-30 133.7 82 82.9
MBI05_g27045_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D029292 6.7e-30 133.7 82 82.9
SalBow6G6652 Salvia bowleyana HOM05D000181 ORTHO05D006419 8.8e-30 133.3 82 80.5
TAR376G0932 Trochodendron aralioides HOM05D000181 ORTHO05D006419 8.8e-30 133.3 82 82.9
VMungo1309G2279 Vigna mungo HOM05D000181 ORTHO05D006419 8.8e-30 133.3 82 81.7
AL1G57840 Arabidopsis lyrata HOM05D000181 ORTHO05D006419 1.1e-29 132.9 82 79.3
AT1G50250 Arabidopsis thaliana HOM05D000181 ORTHO05D006419 1.1e-29 132.9 82 79.3
Carub.0001s3935 Capsella rubella HOM05D000181 ORTHO05D006419 1.1e-29 132.9 82 79.3
CARHR040310 Cardamine hirsuta HOM05D000181 ORTHO05D006419 1.1e-29 132.9 82 79.3
Duzib116G0870 Durio zibethinus HOM05D000181 ORTHO05D006419 1.1e-29 132.9 82 82.9
Thhalv10018191m.g Eutrema salsugineum HOM05D000181 ORTHO05D006419 1.1e-29 132.9 82 79.3
CAN.G311.108 Capsicum annuum HOM05D000181 ORTHO05D006419 1.5e-29 132.5 82 82.9
Ca_15444_v3 Cicer arietinum L. HOM05D000181 ORTHO05D006419 1.5e-29 132.5 82 81.7
Oeu056216.1 Olea europaea HOM05D000181 ORTHO05D006419 1.5e-29 132.5 82 81.7
Phvul.009G021400 Phaseolus vulgaris HOM05D000181 ORTHO05D006419 1.5e-29 132.5 82 81.7
Sp5g22720 Schrenkiella parvula HOM05D000181 ORTHO05D006419 1.5e-29 132.5 82 78.0
Aqoxy6G01762 Aquilegia oxysepala HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 82.9
BcaB03g15171 Brassica carinata HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 79.3
BcaC08g46190 Brassica carinata HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 79.3
A07p34230 Brassica napus HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 79.3
C06p42330 Brassica napus HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 79.3
BolC6t39196H Brassica oleracea HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 79.3
BraA07t31052Z Brassica rapa HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 79.3
CSS0022449 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 82.9
CSS0047800 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 82.9
Migut.C00945 Erythranthe guttata HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 82.9
Glyma.04G019100 Glycine max HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 81.7
Peaxi162Scf00400g00310 Petunia axillaris HOM05D000181 ORTHO05D006419 2.0e-29 132.1 82 82.9
ECA233G2108 Erigeron canadensis HOM05D000181 ORTHO05D029292 2.6e-29 131.7 82 82.9
Gohir.A01G107100 Gossypium hirsutum HOM05D000181 ORTHO05D006419 2.6e-29 131.7 82 82.9
Gohir.D01G093500 Gossypium hirsutum HOM05D000181 ORTHO05D006419 2.6e-29 131.7 82 82.9
Gorai.002G118800 Gossypium raimondii HOM05D000181 ORTHO05D006419 2.6e-29 131.7 82 82.9
Nitab4.5_0000337g0200 Nicotiana tabacum HOM05D000181 ORTHO05D006419 2.6e-29 131.7 82 81.7
Nitab4.5_0002710g0110 Nicotiana tabacum HOM05D000181 ORTHO05D006419 2.6e-29 131.7 82 81.7
Sabra05G0192700 Salix brachista HOM05D000181 ORTHO05D006419 2.6e-29 131.7 82 80.5
Nn5g30914 Nelumbo nucifera HOM05D000181 ORTHO05D006419 3.3e-29 131.3 82 80.5
Solyc04g082250.3 Solanum lycopersicum HOM05D000181 ORTHO05D006419 3.3e-29 131.3 82 82.9
Sopen04g035870 Solanum pennellii HOM05D000181 ORTHO05D006419 3.3e-29 131.3 82 82.9
PGSC0003DMG400009900 Solanum tuberosum HOM05D000181 ORTHO05D006419 3.3e-29 131.3 82 82.9
TAR628G1216 Trochodendron aralioides HOM05D000181 ORTHO05D006419 3.3e-29 131.3 82 82.9
vmacro21827 Vaccinium macrocarpon HOM05D000181 ORTHO05D006419 3.3e-29 131.3 87 80.5
Thhalv10022579m.g Eutrema salsugineum HOM05D000181 ORTHO05D006419 4.4e-29 131.0 82 79.3
Lj4A12T82 Lonicera japonica HOM05D000181 ORTHO05D006419 4.4e-29 131.0 82 82.9
Potri.005G249200 Populus trichocarpa HOM05D000181 ORTHO05D006419 4.4e-29 131.0 82 81.7
Lj1g0006399 Lotus japonicus HOM05D000181 ORTHO05D006419 5.7e-29 130.6 82 81.7
Prupe.1G355600 Prunus persica HOM05D000181 ORTHO05D006419 5.7e-29 130.6 82 81.7
ATR0661G126 Amborella trichopoda HOM05D000181 ORTHO05D006419 7.4e-29 130.2 82 80.5
Nitab4.5_0000588g0220 Nicotiana tabacum HOM05D000181 ORTHO05D006419 7.4e-29 130.2 82 81.7
Sp7g08320 Schrenkiella parvula HOM05D000181 ORTHO05D006419 7.4e-29 130.2 82 79.3
Migut.N03199 Erythranthe guttata HOM05D000181 ORTHO05D006419 9.7e-29 129.8 82 80.5
DCAR_016767 Daucus carota HOM05D000181 ORTHO05D006419 1.3e-28 129.4 82 78.0
Lalb_Chr08g0246361 Lupinus albus HOM05D000181 ORTHO05D006419 1.3e-28 129.4 82 79.3
AL8G19340 Arabidopsis lyrata HOM05D000181 ORTHO05D006419 1.7e-28 129.0 82 80.5
AT5G42270 Arabidopsis thaliana HOM05D000181 ORTHO05D006419 1.7e-28 129.0 82 80.5
PSO210G3385 Papaver somniferum HOM05D000181 ORTHO05D006419 1.7e-28 129.0 82 80.5
Ah.00g000400 Amaranthus hybridus HOM05D000181 ORTHO05D006419 2.2e-28 128.6 82 80.5
CARHR284880 Cardamine hirsuta HOM05D000181 ORTHO05D006419 2.2e-28 128.6 82 80.5
FvH4_2g37610 Fragaria vesca HOM05D000181 ORTHO05D006419 2.2e-28 128.6 82 79.3
FAN15G3612 Fragaria x ananassa HOM05D000181 ORTHO05D006419 2.2e-28 128.6 82 79.3
FAN20G0286 Fragaria x ananassa HOM05D000181 ORTHO05D006419 2.2e-28 128.6 82 79.3
FAN27G1176 Fragaria x ananassa HOM05D000181 ORTHO05D006419 2.2e-28 128.6 82 79.3
Carub.0008s0692 Capsella rubella HOM05D000181 ORTHO05D006419 2.8e-28 128.3 82 80.5
DCAR_013907 Daucus carota HOM05D000181 ORTHO05D006419 2.8e-28 128.3 82 79.3
RcHm_v2.0_Chr6g0304121 Rosa chinensis HOM05D000181 ORTHO05D006419 2.8e-28 128.3 82 78.0
CDE06G2130 Ceratophyllum demersum HOM05D000181 ORTHO05D006419 3.7e-28 127.9 82 78.0
AUR62036891 Chenopodium quinoa HOM05D000181 ORTHO05D006419 3.7e-28 127.9 82 80.5
HanXRQChr14g0428751 Helianthus annuus HOM05D000181 ORTHO05D006419 3.7e-28 127.9 82 79.3
AUR62043386 Chenopodium quinoa HOM05D000181 ORTHO05D006419 4.8e-28 127.5 82 79.3
Lsat_1_v5_gn_2_6021 Lactuca sativa HOM05D000181 ORTHO05D006419 6.3e-28 127.1 82 80.5
Lj4A804T71 Lonicera japonica HOM05D000181 ORTHO05D006419 6.3e-28 127.1 82 79.3
MD15G1003200 Malus domestica HOM05D000181 ORTHO05D006419 6.3e-28 127.1 82 78.0
Medtr3g115110 Medicago truncatula HOM05D000181 ORTHO05D006419 6.3e-28 127.1 82 79.3
CDE07G1193 Ceratophyllum demersum HOM05D000181 ORTHO05D006419 8.2e-28 126.7 82 76.8
MD08G1003700 Malus domestica HOM05D000181 ORTHO05D006419 8.2e-28 126.7 82 79.3
HanXRQChr06g0184921 Helianthus annuus HOM05D000181 ORTHO05D006419 1.1e-27 126.3 82 80.5
Psat5g011960 Pisum sativum HOM05D000181 ORTHO05D006419 1.4e-27 125.9 81 79.0
SGA_v2.0_scaffold108G30839 Striga asiatica HOM05D000181 ORTHO05D006419 1.8e-27 125.6 82 78.0
TPR.G38244 Trifolium pratense HOM05D000181 ORTHO05D006419 3.1e-27 124.8 82 78.0
AagrBONN_evm.TU.Sc2ySwM_362.1082 Anthoceros agrestis HOM05D000181 ORTHO05D006419 5.3e-27 124.0 82 75.6
ECA238G0039 Erigeron canadensis HOM05D000181 ORTHO05D006419 7.0e-27 123.6 82 78.0
SEGI_28828 Sequoiadendron giganteum HOM05D000181 ORTHO05D006419 1.2e-26 122.9 81 76.5
EL10Ac1g01987 Beta vulgaris HOM05D000181 ORTHO05D006419 1.6e-26 122.5 82 75.6
SMO367G1037 Selaginella moellendorffii HOM05D000181 ORTHO05D006419 2.0e-26 122.1 81 75.3
PSO541G0070 Papaver somniferum HOM05D000181 ORTHO05D006419 1.3e-25 119.4 82 74.4
PSO675G0020 Papaver somniferum HOM05D000181 ORTHO05D006419 1.3e-25 119.4 82 74.4
Mapoly0105s0038 Marchantia polymorpha HOM05D000181 ORTHO05D006419 1.7e-25 119.0 82 72.0
Sabra02G0009500 Salix brachista HOM05D000181 ORTHO05D006419 1.9e-24 115.5 122 56.6
Gorai.009G188700 Gossypium raimondii HOM05D000181 ORTHO05D006419 2.5e-24 115.2 69 84.1
Pp3c20_15780 Physcomitrium patens HOM05D000181 ORTHO05D006419 3.2e-24 114.8 82 70.7
Pp3c23_8400 Physcomitrium patens HOM05D000181 ORTHO05D006419 3.2e-24 114.8 82 70.7
MBI05_g25546_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D006419 1.0e-22 109.8 82 72.0
CBR_g4126 Chara braunii HOM05D000181 ORTHO05D006419 1.7e-20 102.4 82 62.2
PRCOL_00001055 Prasinoderma coloniale HOM05D000181 ORTHO05D006419 7.2e-16 87.0 81 51.9
Actinidia17034 Actinidia chinensis HOM05D000181 ORTHO05D006419 6.8e-14 80.5 49 79.6
Cre12.g485800 Chlamydomonas reinhardtii HOM05D000181 ORTHO05D006419 7.5e-13 77.0 81 48.1
MCO10G216 Micromonas commoda HOM05D000181 ORTHO05D006419 1.7e-12 75.9 81 49.4
Peaxi162Scf00346g00053 Petunia axillaris HOM05D000181 ORTHO05D029292 4.1e-11 71.2 45 80.0
Oeu004530.1 Olea europaea HOM05D000181 ORTHO05D005757 1.2e-10 69.7 55 67.3


User provided reference genes

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