Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 5.5e-256 887.1 443 100.0
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 1.0e-79 301.6 152 92.8
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 1.1e-78 298.1 153 91.5
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 3.2e-78 296.6 153 90.2
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 3.2e-78 296.6 170 82.9
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 1.2e-77 294.7 153 90.2
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 4.6e-77 292.7 153 88.2
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 4.6e-77 292.7 153 88.2
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 6.0e-77 292.4 153 86.9
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 1.8e-76 290.8 153 88.9
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 1.8e-76 290.8 153 88.9
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 2.3e-76 290.4 153 87.6
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 3.0e-76 290.0 153 86.3
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 3.0e-76 290.0 153 87.6
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 3.0e-76 290.0 153 87.6
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 3.9e-76 289.7 170 79.4
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 3.9e-76 289.7 153 90.2
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 3.9e-76 289.7 153 86.3
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 6.7e-76 288.9 153 86.3
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 8.7e-76 288.5 153 86.3
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 1.1e-75 288.1 153 86.3
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.1e-75 288.1 153 86.3
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 1.5e-75 287.7 168 80.4
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 1.5e-75 287.7 153 86.3
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.5e-75 287.7 153 86.3
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.5e-75 287.7 153 86.3
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 1.9e-75 287.3 153 86.3
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 1.9e-75 287.3 153 86.9
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 1.9e-75 287.3 196 71.4
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 2.5e-75 287.0 153 86.3
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 3.3e-75 286.6 153 86.9
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 4.3e-75 286.2 153 85.0
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 4.3e-75 286.2 153 85.0
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 4.3e-75 286.2 153 85.0
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 4.3e-75 286.2 153 85.0
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 4.3e-75 286.2 153 85.0
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 5.7e-75 285.8 153 86.3
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 5.7e-75 285.8 170 78.8
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 7.4e-75 285.4 168 79.2
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 9.6e-75 285.0 157 88.5
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 1.3e-74 284.6 165 84.8
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 1.6e-74 284.3 153 84.3
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 2.1e-74 283.9 153 87.6
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 2.1e-74 283.9 153 84.3
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 2.8e-74 283.5 153 83.7
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 2.8e-74 283.5 153 85.0
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 3.7e-74 283.1 153 87.6
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 4.8e-74 282.7 153 84.3
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 6.2e-74 282.3 153 83.7
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 1.8e-73 280.8 152 84.9
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 2.4e-73 280.4 152 84.9
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 3.1e-73 280.0 153 83.7
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 4.1e-73 279.6 153 83.0
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 6.9e-73 278.9 153 85.6
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.2e-72 278.1 153 83.0
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.2e-72 278.1 153 84.3
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 1.2e-72 278.1 152 84.9
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 1.5e-72 277.7 153 85.0
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 1.5e-72 277.7 153 83.7
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 2.0e-72 277.3 153 83.0
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 2.0e-72 277.3 153 85.0
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 3.4e-72 276.6 185 71.9
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 5.8e-72 275.8 153 83.0
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 5.8e-72 275.8 153 84.3
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 7.6e-72 275.4 174 75.9
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 1.7e-71 274.2 153 82.4
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 2.2e-71 273.9 152 84.2
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 2.9e-71 273.5 153 82.4
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 2.9e-71 273.5 161 80.7
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 1.1e-70 271.6 148 83.8
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.4e-70 271.2 153 84.3
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 7.1e-70 268.9 164 78.0
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.6e-69 267.7 164 77.4
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 2.7e-69 266.9 152 78.3
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 2.7e-69 266.9 153 81.7
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 4.6e-69 266.2 153 83.0
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 4.6e-69 266.2 145 84.8
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 2.3e-68 263.8 154 81.2
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 2.3e-68 263.8 152 77.6
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 5.1e-68 262.7 156 80.1
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 6.7e-68 262.3 153 81.0
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 1.9e-67 260.8 153 81.0
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 1.8e-65 254.2 137 83.2
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 2.4e-65 253.8 141 80.1
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 1.1e-59 235.0 153 77.1
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 7.4e-59 232.3 124 87.1
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 9.7e-59 231.9 153 69.9
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 1.3e-58 231.5 130 85.4
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 1.7e-58 231.1 122 86.9
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 2.2e-58 230.7 128 84.4
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 2.2e-58 230.7 124 86.3
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 1.5e-56 224.6 144 70.1
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 1.0e-55 221.9 153 71.2
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 2.2e-55 220.7 152 69.7
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.9e-54 217.6 111 89.2
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 9.4e-54 215.3 152 65.8
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 2.3e-52 210.7 124 77.4
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 3.9e-52 209.9 147 65.3
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 4.5e-40 169.9 141 58.2
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 3.2e-38 163.7 124 66.9
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 2.6e-27 127.5 186 40.3
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 4.3e-22 110.2 169 44.4
vmacro05505 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 2.2e-18 97.8 194 33.0
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 1.1e-17 95.5 237 30.4
vmacro19208 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 4.6e-16 90.1 187 33.2
vmacro14773 Vaccinium macrocarpon HOM05D005460 ORTHO05D009886 5.9e-16 89.7 144 36.8
vmacro21559 Vaccinium macrocarpon HOM05D003475 ORTHO05D004155 5.9e-16 89.7 397 24.2
vmacro23207 Vaccinium macrocarpon HOM05D001558 ORTHO05D003061 7.8e-16 89.4 178 32.6
vmacro17637 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 1.0e-15 89.0 213 32.4
vmacro23376 Vaccinium macrocarpon HOM05D001558 ORTHO05D003061 1.7e-15 88.2 184 30.4
vmacro07100 Vaccinium macrocarpon HOM05D001127 ORTHO05D002230 1.1e-14 85.5 127 40.9
vmacro06545 Vaccinium macrocarpon HOM05D002963 ORTHO05D003302 2.5e-14 84.3 238 29.4
vmacro13138 Vaccinium macrocarpon HOM05D001282 ORTHO05D009886 9.5e-14 82.4 152 35.5
vmacro23112 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 2.1e-13 81.3 247 30.8
vmacro04977 Vaccinium macrocarpon HOM05D004351 ORTHO05D005196 3.6e-13 80.5 265 30.6
vmacro14599 Vaccinium macrocarpon HOM05D000716 ORTHO05D010254 2.3e-12 77.8 217 27.6
vmacro22644 Vaccinium macrocarpon HOM05D000083 ORTHO05D001732 5.2e-12 76.6 131 33.6
vmacro14864 Vaccinium macrocarpon HOM05D001069 ORTHO05D009886 1.2e-11 75.5 156 34.0
vmacro17584 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 1.2e-11 75.5 164 30.5
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 3.4e-11 73.9 161 30.4
vmacro12534 Vaccinium macrocarpon HOM05D000671 ORTHO05D004414 3.4e-11 73.9 130 33.1
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 2.2e-10 71.2 38 81.6
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 1.1e-09 68.9 133 34.6
vmacro10451 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 1.1e-09 68.9 70 45.7
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 1.4e-09 68.6 208 30.3
vmacro00602 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 7.0e-09 66.2 179 28.5
vmacro05561 Vaccinium macrocarpon HOM05D001266 ORTHO05D001105 1.2e-08 65.5 208 29.8
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 1.2e-08 65.5 57 50.9
vmacro11232 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 1.6e-08 65.1 65 49.2
vmacro14502 Vaccinium macrocarpon HOM05D003982 ORTHO05D004831 1.0e-07 62.4 227 30.0
vmacro20798 Vaccinium macrocarpon HOM05D000051 ORTHO05D020337 1.7e-07 61.6 223 30.9
vmacro07276 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 8.6e-07 59.3 187 32.6
vmacro23350 Vaccinium macrocarpon HOM05D000121 ORTHO05D000102 1.1e-06 58.9 88 38.6
vmacro22188 Vaccinium macrocarpon HOM05D005356 ORTHO05D006596 1.5e-06 58.5 245 25.7
vmacro13134 Vaccinium macrocarpon HOM05D004352 ORTHO05D000003 3.3e-06 57.4 41 58.5
Eucgr.H03782 Eucalyptus grandis HOM05D000002 ORTHO05D000047 5.6e-06 56.6 131 26.0
SMO356G0017 Selaginella moellendorffii HOM05D007351 ORTHO05D017832 5.6e-06 56.6 141 33.3
SEGI_25541 Sequoiadendron giganteum HOM05D007351 ORTHO05D017832 9.5e-06 55.8 138 31.9


User provided reference genes

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