Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02467 Vaccinium macrocarpon HOM05D003536 ORTHO05D004233 7.2e-170 600.5 307 100.0
Rhsim02G0085700 Rhododendron simsii HOM05D003536 ORTHO05D004233 1.0e-62 244.6 178 76.4
RhsimUnG0015200 Rhododendron simsii HOM05D003536 ORTHO05D004233 1.7e-62 243.8 176 77.3
CSS0046625 Camellia sinensis var. sinensis HOM05D003536 ORTHO05D004233 1.6e-60 237.3 178 71.9
CSS0012110 Camellia sinensis var. sinensis HOM05D003536 ORTHO05D004233 2.6e-58 229.9 191 65.4
vmacro15697 Vaccinium macrocarpon HOM05D003536 ORTHO05D004233 7.4e-58 228.4 161 78.3
CSS0007932 Camellia sinensis var. sinensis HOM05D003536 ORTHO05D004233 1.1e-56 224.6 191 64.4
Dinv33222 Davidia involucrata HOM05D003536 ORTHO05D004233 1.4e-56 224.2 161 73.3
GSVIVG01038187001 Vitis vinifera HOM05D003536 ORTHO05D004233 1.3e-54 217.6 177 65.5
Haze_23535 Corylus avellana HOM05D003536 ORTHO05D004233 1.7e-54 217.2 175 67.4
Cfa019551 Carpinus fangiana HOM05D003536 ORTHO05D004233 6.5e-54 215.3 189 63.0
Cc03_g14490 Coffea canephora HOM05D003536 ORTHO05D004233 1.1e-53 214.5 158 72.2
CiPaw.11G159200 Carya illinoinensis HOM05D003536 ORTHO05D004233 1.9e-53 213.8 191 61.8
COL.COLO4_31399 Corchorus olitorius HOM05D003536 ORTHO05D004233 4.2e-53 212.6 171 67.8
Prupe.4G214600 Prunus persica HOM05D003536 ORTHO05D004233 4.2e-53 212.6 168 70.8
Oeu039254.1 Olea europaea HOM05D003536 ORTHO05D004233 1.2e-52 211.1 156 71.2
Duzib160G0652 Durio zibethinus HOM05D003536 ORTHO05D004233 1.6e-52 210.7 168 67.9
Duzib235G0074 Durio zibethinus HOM05D003536 ORTHO05D004233 1.6e-52 210.7 158 70.9
TAR629G2543 Trochodendron aralioides HOM05D003536 ORTHO05D004233 1.6e-52 210.7 193 61.7
Thecc.06G179100 Theobroma cacao HOM05D003536 ORTHO05D004233 2.1e-52 210.3 158 70.3
Potri.004G050800 Populus trichocarpa HOM05D003536 ORTHO05D004233 3.6e-52 209.5 158 70.9
Migut.L00733 Erythranthe guttata HOM05D003536 ORTHO05D004233 4.7e-52 209.1 159 71.7
MD11G1217000 Malus domestica HOM05D003536 ORTHO05D004233 7.9e-52 208.4 177 66.1
MD03G1200000 Malus domestica HOM05D003536 ORTHO05D004233 1.0e-51 208.0 177 66.1
Peaxi162Scf00341g00410 Petunia axillaris HOM05D003536 ORTHO05D004233 1.0e-51 208.0 168 67.3
Manes.09G040400 Manihot esculenta HOM05D003536 ORTHO05D004233 1.4e-51 207.6 178 63.5
Migut.L00928 Erythranthe guttata HOM05D003536 ORTHO05D004233 1.8e-51 207.2 159 71.1
Oeu018052.1 Olea europaea HOM05D003536 ORTHO05D004233 1.8e-51 207.2 158 70.9
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 3.0e-51 206.5 191 61.3
Duzib192G0083 Durio zibethinus HOM05D003536 ORTHO05D004233 5.2e-51 205.7 158 70.9
Potri.011G059700 Populus trichocarpa HOM05D003536 ORTHO05D004233 5.2e-51 205.7 158 69.0
Nitab4.5_0006944g0020 Nicotiana tabacum HOM05D003536 ORTHO05D004233 8.8e-51 204.9 179 62.0
SGA_v2.0_scaffold189G40381 Striga asiatica HOM05D003536 ORTHO05D004233 8.8e-51 204.9 177 63.8
CiPaw.12G113000 Carya illinoinensis HOM05D003536 ORTHO05D004233 1.5e-50 204.1 158 67.1
CsaV3_6G006300 Cucumis sativus L. HOM05D003536 ORTHO05D004233 2.0e-50 203.8 159 70.4
arahy.Tifrunner.gnm1.ann1.NDA9EK Arachis hypogaea HOM05D003536 ORTHO05D004233 2.6e-50 203.4 174 62.1
MSTRG.15254 Avicennia marina HOM05D003536 ORTHO05D004233 2.6e-50 203.4 158 70.3
MELO3C022490.2 Cucumis melo HOM05D003536 ORTHO05D004233 2.6e-50 203.4 159 70.4
Atru.chr11.1823 Acer truncatum HOM05D003536 ORTHO05D004233 4.4e-50 202.6 158 68.4
QL01p015305 Quercus lobata HOM05D003536 ORTHO05D004233 4.4e-50 202.6 191 57.6
arahy.Tifrunner.gnm1.ann1.3L4J3R Arachis hypogaea HOM05D003536 ORTHO05D004233 9.7e-50 201.4 174 61.5
RcHm_v2.0_Chr5g0040091 Rosa chinensis HOM05D003536 ORTHO05D004233 1.7e-49 200.7 168 66.7
Sed0014057 Sechium edule HOM05D003536 ORTHO05D004233 1.7e-49 200.7 160 68.8
TWI38G2316 Tripterygium wilfordii HOM05D003536 ORTHO05D004233 1.7e-49 200.7 158 70.3
Manes.08G040100 Manihot esculenta HOM05D003536 ORTHO05D004233 2.2e-49 200.3 178 62.9
TPR.G33765 Trifolium pratense HOM05D003536 ORTHO05D004233 2.2e-49 200.3 178 62.4
Lalb_Chr15g0081231 Lupinus albus HOM05D003536 ORTHO05D004233 2.8e-49 199.9 160 65.6
Lalb_Chr15g0081241 Lupinus albus HOM05D003536 ORTHO05D004233 2.8e-49 199.9 160 65.6
Sopen12g031020 Solanum pennellii HOM05D003536 ORTHO05D004233 2.8e-49 199.9 168 64.9
TWI63G0523 Tripterygium wilfordii HOM05D003536 ORTHO05D004233 3.7e-49 199.5 177 62.7
Atru.chr2.3484 Acer truncatum HOM05D003536 ORTHO05D004233 4.8e-49 199.1 177 61.6
unitig_37.g12355 Utricularia gibba HOM05D003536 ORTHO05D004233 4.8e-49 199.1 179 61.5
Glyma.08G316900 Glycine max HOM05D003536 ORTHO05D004233 6.3e-49 198.7 158 65.2
DCAR_012946 Daucus carota HOM05D003536 ORTHO05D004233 8.2e-49 198.4 178 61.8
Solyc12g089150.2 Solanum lycopersicum HOM05D003536 ORTHO05D004233 8.2e-49 198.4 168 64.3
PGSC0003DMG400015457 Solanum tuberosum HOM05D003536 ORTHO05D004233 8.2e-49 198.4 168 64.9
Lalb_Chr15g0081251 Lupinus albus HOM05D003536 ORTHO05D004233 1.4e-48 197.6 158 65.8
Medtr3g052210 Medicago truncatula HOM05D003536 ORTHO05D004233 1.4e-48 197.6 158 67.7
Glyma.18G096200 Glycine max HOM05D003536 ORTHO05D004233 2.4e-48 196.8 158 64.6
Sabra11G0041300 Salix brachista HOM05D003536 ORTHO05D004233 2.4e-48 196.8 161 68.3
DCAR_019273 Daucus carota HOM05D003536 ORTHO05D004233 3.1e-48 196.4 156 67.3
Ciclev10009295m.g Citrus clementina HOM05D003536 ORTHO05D004233 5.3e-48 195.7 159 67.9
Medtr5g092870 Medicago truncatula HOM05D003536 ORTHO05D004233 2.6e-47 193.4 159 63.5
Nn6g33747 Nelumbo nucifera HOM05D003536 ORTHO05D004233 3.5e-47 193.0 158 63.9
Sed0001901 Sechium edule HOM05D003536 ORTHO05D004233 3.5e-47 193.0 159 66.7
TAR375G0806 Trochodendron aralioides HOM05D003536 ORTHO05D004233 3.5e-47 193.0 205 56.6
CAN.G1139.15 Capsicum annuum HOM05D003536 ORTHO05D004233 4.5e-47 192.6 191 57.1
TPR.G1154 Trifolium pratense HOM05D003536 ORTHO05D004233 4.5e-47 192.6 159 63.5
Lalb_Chr04g0248391 Lupinus albus HOM05D003536 ORTHO05D004233 5.9e-47 192.2 177 58.2
Glyma.14G023200 Glycine max HOM05D003536 ORTHO05D004233 1.3e-46 191.0 177 61.0
ClCG06G000520 Citrullus lanatus HOM05D003536 ORTHO05D004233 1.7e-46 190.7 151 70.2
Migut.H00835 Erythranthe guttata HOM05D003536 ORTHO05D004233 1.7e-46 190.7 158 65.8
Glyma.02G291600 Glycine max HOM05D003536 ORTHO05D004233 2.2e-46 190.3 177 61.0
Psat2g011920 Pisum sativum HOM05D003536 ORTHO05D004233 2.9e-46 189.9 159 64.2
PSO648G0105 Papaver somniferum HOM05D003536 ORTHO05D004233 3.8e-46 189.5 179 60.9
Psat5g178600 Pisum sativum HOM05D003536 ORTHO05D004233 3.8e-46 189.5 158 63.9
Actinidia28974 Actinidia chinensis HOM05D003536 ORTHO05D004233 5.0e-46 189.1 161 64.6
Aqoxy6G01555 Aquilegia oxysepala HOM05D003536 ORTHO05D004233 5.0e-46 189.1 160 65.6
CANSAT11G2387 Cannabis sativa HOM05D003536 ORTHO05D004233 5.0e-46 189.1 161 64.0
Phvul.008G267900 Phaseolus vulgaris HOM05D003536 ORTHO05D004233 8.5e-46 188.3 177 58.8
THA.LOC104812620 Tarenaya hassleriana HOM05D003536 ORTHO05D004233 8.5e-46 188.3 158 63.3
Gohir.A10G028700 Gossypium hirsutum HOM05D003536 ORTHO05D004233 1.1e-45 188.0 179 59.8
THA.LOC104820574 Tarenaya hassleriana HOM05D003536 ORTHO05D004233 1.1e-45 188.0 158 64.6
PGR119G0635 Punica granatum HOM05D003536 ORTHO05D004233 1.9e-45 187.2 158 63.3
Gohir.D05G160800 Gossypium hirsutum HOM05D003536 ORTHO05D004233 2.5e-45 186.8 158 63.9
Gorai.009G166000 Gossypium raimondii HOM05D003536 ORTHO05D004233 2.5e-45 186.8 168 60.7
Gohir.D09G073600 Gossypium hirsutum HOM05D003536 ORTHO05D004233 3.2e-45 186.4 177 58.2
Gorai.006G088600 Gossypium raimondii HOM05D003536 ORTHO05D004233 3.2e-45 186.4 177 58.2
ECA238G2064 Erigeron canadensis HOM05D003536 ORTHO05D004233 4.2e-45 186.0 191 55.0
Gohir.A09G074000 Gossypium hirsutum HOM05D003536 ORTHO05D004233 4.2e-45 186.0 177 57.6
PSO339G1992 Papaver somniferum HOM05D003536 ORTHO05D004233 4.2e-45 186.0 159 64.8
Aqoxy1G04249 Aquilegia oxysepala HOM05D003536 ORTHO05D004233 7.2e-45 185.3 181 60.2
Eucgr.J00643 Eucalyptus grandis HOM05D003536 ORTHO05D004233 7.2e-45 185.3 158 62.7
FvH4_3g22850 Fragaria vesca HOM05D003536 ORTHO05D004233 7.2e-45 185.3 158 64.6
FAN21G1823 Fragaria x ananassa HOM05D003536 ORTHO05D004233 7.2e-45 185.3 158 64.6
Gohir.A05G158100 Gossypium hirsutum HOM05D003536 ORTHO05D004233 7.2e-45 185.3 158 63.9
VMungo0540G1494 Vigna mungo HOM05D003536 ORTHO05D004233 7.2e-45 185.3 158 60.8
Lj2A346T41 Lonicera japonica HOM05D003536 ORTHO05D004233 9.4e-45 184.9 148 67.6
Gorai.011G031000 Gossypium raimondii HOM05D003536 ORTHO05D004233 1.6e-44 184.1 171 61.4
HanXRQChr14g0462891 Helianthus annuus HOM05D003536 ORTHO05D004233 2.1e-44 183.7 191 54.5
Lj6g0024406 Lotus japonicus HOM05D003536 ORTHO05D004233 2.1e-44 183.7 158 61.4
unitig_46.g18655 Utricularia gibba HOM05D003536 ORTHO05D004233 3.6e-44 183.0 158 63.3
LjContig00272g0022132 Lotus japonicus HOM05D003536 ORTHO05D004233 1.4e-43 181.0 177 55.9
CARHR027980 Cardamine hirsuta HOM05D003536 ORTHO05D004233 1.8e-43 180.6 168 60.1
Gohir.D10G029100 Gossypium hirsutum HOM05D003536 ORTHO05D004233 2.3e-43 180.3 179 57.5
VMungo0647G0941 Vigna mungo HOM05D003536 ORTHO05D004233 2.3e-43 180.3 179 55.9
Haze_09311 Corylus avellana HOM05D003536 ORTHO05D004233 3.0e-43 179.9 137 70.1
FAN16G1068 Fragaria x ananassa HOM05D003536 ORTHO05D004233 4.0e-43 179.5 158 63.3
Nn1g00740 Nelumbo nucifera HOM05D003536 ORTHO05D004233 6.7e-43 178.7 175 57.7
Gohir.A11G169750 Gossypium hirsutum HOM05D003536 ORTHO05D004233 1.2e-42 177.9 163 62.0
BolC3t19791H Brassica oleracea HOM05D003536 ORTHO05D004233 1.5e-42 177.6 171 58.5
Carub.0001s2696 Capsella rubella HOM05D003536 ORTHO05D004233 2.0e-42 177.2 158 61.4
AL1G42100 Arabidopsis lyrata HOM05D003536 ORTHO05D004233 3.3e-42 176.4 168 58.9
AT1G28490 Arabidopsis thaliana HOM05D003536 ORTHO05D004233 3.3e-42 176.4 168 58.9
Sp1g24750 Schrenkiella parvula HOM05D003536 ORTHO05D004233 3.3e-42 176.4 172 57.6
BcaB03g12101 Brassica carinata HOM05D003536 ORTHO05D004233 4.4e-42 176.0 158 61.4
BcaB07g32470 Brassica carinata HOM05D003536 ORTHO05D004233 5.7e-42 175.6 158 62.0
Ca_06324_v3 Cicer arietinum L. HOM05D003536 ORTHO05D004233 5.7e-42 175.6 148 62.8
Aa31LG6G11010 Aethionema arabicum HOM05D003536 ORTHO05D004233 7.5e-42 175.3 161 60.9
BcaC01g00063 Brassica carinata HOM05D003536 ORTHO05D004233 7.5e-42 175.3 158 61.4
BraA07t28906Z Brassica rapa HOM05D003536 ORTHO05D004233 7.5e-42 175.3 175 57.7
ATR0681G197 Amborella trichopoda HOM05D003536 ORTHO05D004233 9.7e-42 174.9 161 58.4
A08p25480 Brassica napus HOM05D003536 ORTHO05D004233 9.7e-42 174.9 158 61.4
BolC7t42188H Brassica oleracea HOM05D003536 ORTHO05D004233 9.7e-42 174.9 175 57.7
Hund02378 Selenicereus undatus HOM05D003536 ORTHO05D004233 9.7e-42 174.9 161 62.7
BraA08t34499Z Brassica rapa HOM05D003536 ORTHO05D004233 1.7e-41 174.1 158 61.4
BcaC05g26899 Brassica carinata HOM05D003536 ORTHO05D004233 2.2e-41 173.7 158 61.4
C05p27490 Brassica napus HOM05D003536 ORTHO05D004233 2.2e-41 173.7 158 61.4
C07p16800 Brassica napus HOM05D003536 ORTHO05D004233 2.2e-41 173.7 158 60.8
BolC5t31469H Brassica oleracea HOM05D003536 ORTHO05D004233 2.2e-41 173.7 158 61.4
Thhalv10008609m.g Eutrema salsugineum HOM05D003536 ORTHO05D004233 2.2e-41 173.7 158 60.1
BraA09t39265Z Brassica rapa HOM05D003536 ORTHO05D004233 2.8e-41 173.3 167 58.7
A07p11150 Brassica napus HOM05D003536 ORTHO05D004233 3.7e-41 172.9 158 60.8
Lsat_1_v5_gn_2_134160 Lactuca sativa HOM05D003536 ORTHO05D004233 3.7e-41 172.9 161 60.2
A09p37550 Brassica napus HOM05D003536 ORTHO05D004233 4.8e-41 172.6 158 60.8
Phvul.006G044400 Phaseolus vulgaris HOM05D003536 ORTHO05D004233 4.8e-41 172.6 158 58.2
EL10Ac2g03342 Beta vulgaris HOM05D003536 ORTHO05D004233 6.3e-41 172.2 160 61.9
CDE07G1169 Ceratophyllum demersum HOM05D004887 ORTHO05D006168 8.2e-41 171.8 187 54.5
Gohir.A12G052800 Gossypium hirsutum HOM05D003536 ORTHO05D004233 8.2e-41 171.8 160 60.6
BcaB03g13924 Brassica carinata HOM05D003536 ORTHO05D004233 2.4e-40 170.2 159 60.4
HanXRQChr15g0493141 Helianthus annuus HOM05D003536 ORTHO05D004233 2.4e-40 170.2 221 46.2
AUR62037629 Chenopodium quinoa HOM05D003536 ORTHO05D004233 3.1e-40 169.9 158 62.0
AUR62039177 Chenopodium quinoa HOM05D003536 ORTHO05D004233 7.0e-40 168.7 158 61.4
MBI05_g13422_MAGBIO Magnolia biondii HOM05D003536 ORTHO05D004233 7.0e-40 168.7 193 50.8
Sc12g0007550 Simmondsia chinensis HOM05D003536 ORTHO05D004233 7.0e-40 168.7 158 62.0
CDE04G1024 Ceratophyllum demersum HOM05D003536 ORTHO05D004233 9.1e-40 168.3 166 56.6
Lsat_1_v5_gn_9_58001 Lactuca sativa HOM05D003536 ORTHO05D004233 1.6e-39 167.5 191 49.7
HPP92_012149 Vanilla planifolia HOM05D003536 ORTHO05D004233 1.2e-36 157.9 168 51.8
SEGI_08171 Sequoiadendron giganteum HOM05D003536 ORTHO05D004233 4.0e-35 152.9 162 51.9
Zm00001eb140280 Zea mays HOM05D003536 ORTHO05D004233 5.2e-35 152.5 174 51.7
Gohir.A07G160875 Gossypium hirsutum HOM05D003536 ORTHO05D004233 8.8e-35 151.8 140 59.3
Os01g0963300 Oryza sativa ssp. japonica HOM05D003536 ORTHO05D004233 3.4e-34 149.8 195 48.2
Zm00001eb400730 Zea mays HOM05D003536 ORTHO05D004233 9.8e-34 148.3 169 50.3
Gohir.A01G165866 Gossypium hirsutum HOM05D003536 ORTHO05D004233 2.2e-33 147.1 138 60.9
QL01p015314 Quercus lobata HOM05D003536 ORTHO05D004233 3.7e-33 146.4 154 51.9
C03p75320 Brassica napus HOM05D003536 ORTHO05D004233 1.8e-32 144.1 158 55.7
FAN25G2670 Fragaria x ananassa HOM05D003536 ORTHO05D004233 5.4e-32 142.5 158 53.8
Cpa.g.sc7.5 Carica papaya HOM05D003536 ORTHO05D004233 2.0e-31 140.6 125 64.0
Os11g0168100 Oryza sativa ssp. japonica HOM05D003536 ORTHO05D004233 2.0e-31 140.6 177 47.5
SMO337G0082 Selaginella moellendorffii HOM05D003536 ORTHO05D004233 5.5e-29 132.5 177 43.5
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 9.5e-29 131.7 161 45.3
Nitab4.5_0000151g0150 Nicotiana tabacum HOM05D003536 ORTHO05D004233 4.7e-28 129.4 102 65.7
QL08p025878 Quercus lobata HOM05D003536 ORTHO05D004233 8.0e-28 128.6 137 52.6
Pp3c17_23220 Physcomitrium patens HOM05D003536 ORTHO05D004233 5.4e-24 115.9 190 40.5
AagrBONN_evm.TU.Sc2ySwM_344.813 Anthoceros agrestis HOM05D003536 ORTHO05D004233 9.2e-24 115.2 131 47.3
SGA_v2.0_scaffold20G08963 Striga asiatica HOM05D003536 ORTHO05D004233 1.6e-23 114.4 178 42.1
Mapoly0140s0004 Marchantia polymorpha HOM05D003536 ORTHO05D004233 1.6e-20 104.4 159 39.6
SMO144G0089 Selaginella moellendorffii HOM05D003536 ORTHO05D004233 1.6e-20 104.4 158 40.5
Actinidia30222 Actinidia chinensis HOM05D003536 ORTHO05D004233 3.6e-20 103.2 101 55.4
Mapoly0079s0013 Marchantia polymorpha HOM05D003536 ORTHO05D004233 6.4e-17 92.4 194 32.0
QL08p025876 Quercus lobata HOM05D003536 ORTHO05D004233 1.4e-16 91.3 54 83.3
Pp3c3_31110 Physcomitrium patens HOM05D003536 ORTHO05D004233 4.1e-16 89.7 208 30.3
Lsat_1_v5_gn_0_13460 Lactuca sativa HOM05D003536 ORTHO05D004233 1.0e-14 85.1 126 44.4
Lsat_1_v5_gn_8_13220 Lactuca sativa HOM05D003536 ORTHO05D004233 2.3e-14 84.0 101 49.5
Nitab4.5_0015265g0010 Nicotiana tabacum HOM05D003536 ORTHO05D004233 3.0e-14 83.6 70 65.7
MCO15G081 Micromonas commoda HOM05D003536 ORTHO05D004233 8.6e-14 82.0 188 32.4
Lsat_1_v5_gn_1_90541 Lactuca sativa HOM05D003536 ORTHO05D004233 2.5e-13 80.5 108 44.4
CBR_g4120 Chara braunii HOM05D003536 ORTHO05D004233 2.8e-12 77.0 200 29.0
Lsat_1_v5_gn_2_37881 Lactuca sativa HOM05D003536 ORTHO05D007395 1.4e-11 74.7 81 53.1
Hma1.2p1_0264F.1_g106110 Hydrangea macrophylla HOM05D003536 ORTHO05D004233 1.8e-11 74.3 49 77.6
Lsat_1_v5_gn_3_70401 Lactuca sativa HOM05D003536 ORTHO05D000123 1.7e-09 67.8 195 29.7
Gohir.A10G196100 Gossypium hirsutum HOM05D003536 ORTHO05D004233 8.3e-09 65.5 51 66.7
Cre06.g290100 Chlamydomonas reinhardtii HOM05D003536 ORTHO05D004233 1.6e-07 61.2 161 28.0
Lsat_1_v5_gn_4_133441 Lactuca sativa HOM05D003536 ORTHO05D004233 2.7e-07 60.5 89 41.6


User provided reference genes

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