Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 2.9e-213 745.0 379 100.0
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 1.2e-166 590.1 344 86.6
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 3.2e-135 485.7 336 71.7
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 6.4e-128 461.5 337 70.3
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 9.0e-114 414.5 333 61.9
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 1.2e-113 414.1 351 63.0
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 4.9e-112 408.7 333 60.7
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 8.4e-112 407.9 332 60.5
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 2.7e-110 402.9 332 60.2
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 3.5e-110 402.5 337 62.9
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 5.7e-108 395.2 325 59.4
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 2.8e-107 392.9 333 60.4
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 1.4e-106 390.6 337 58.2
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 6.5e-104 381.7 336 58.3
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 8.5e-104 381.3 317 60.6
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 1.1e-103 380.9 328 58.5
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.2e-102 377.5 354 57.9
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 7.9e-102 374.8 336 56.8
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 1.0e-101 374.4 379 51.7
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.0e-101 374.4 334 57.8
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 1.4e-101 374.0 336 57.7
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 3.0e-101 372.9 334 59.0
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 1.5e-100 370.5 333 56.2
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 2.5e-100 369.8 277 69.7
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 4.8e-99 365.5 336 54.2
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 1.1e-98 364.4 336 56.5
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 4.1e-98 362.5 335 55.5
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 6.9e-98 361.7 331 55.9
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 6.9e-98 361.7 327 56.6
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 2.0e-97 360.1 334 55.4
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 2.6e-97 359.8 349 55.3
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 2.6e-97 359.8 332 56.3
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 1.3e-96 357.5 330 55.8
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 1.7e-96 357.1 331 55.3
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 2.2e-96 356.7 333 54.1
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 1.1e-95 354.4 353 52.7
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 5.5e-95 352.1 336 55.1
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 1.2e-94 350.9 317 57.7
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 1.6e-94 350.5 334 54.2
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 3.6e-94 349.4 338 54.7
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 4.7e-94 349.0 334 56.3
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 6.1e-94 348.6 331 55.9
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 7.9e-94 348.2 331 54.1
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 1.4e-93 347.4 331 55.9
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 1.4e-93 347.4 331 55.6
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 1.8e-93 347.1 360 51.7
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 1.8e-93 347.1 331 55.0
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 2.0e-92 343.6 331 55.3
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 2.0e-92 343.6 352 52.0
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 1.7e-91 340.5 342 52.3
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 2.2e-91 340.1 334 53.0
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 1.4e-90 337.4 328 54.0
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 3.1e-90 336.3 366 51.9
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 4.1e-90 335.9 341 52.2
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 5.3e-90 335.5 350 52.6
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 1.7e-88 330.5 328 53.4
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 2.9e-88 329.7 356 52.0
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 7.2e-87 325.1 335 52.2
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 1.6e-86 323.9 333 51.7
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.6e-86 323.9 333 51.7
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 2.1e-86 323.6 321 54.5
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 4.7e-86 322.4 342 51.8
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 8.0e-86 321.6 333 51.4
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 1.4e-85 320.9 307 55.4
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 3.9e-85 319.3 341 52.2
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 1.1e-84 317.8 327 51.1
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 1.5e-84 317.4 328 49.4
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 1.7e-83 313.9 335 50.7
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.8e-83 312.4 333 50.8
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 6.3e-83 312.0 332 50.3
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 4.1e-82 309.3 328 48.5
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 2.0e-81 307.0 336 47.9
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 1.0e-80 304.7 354 48.3
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 2.2e-80 303.5 330 50.3
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 5.0e-80 302.4 202 69.3
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 8.5e-80 301.6 352 47.7
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 3.3e-76 289.7 342 46.2
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 3.7e-75 286.2 285 55.1
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 3.1e-74 283.1 282 55.3
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 4.1e-74 282.7 361 48.5
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 3.5e-73 279.6 263 52.5
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 7.7e-73 278.5 334 47.9
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 2.9e-72 276.6 334 47.3
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 2.5e-71 273.5 336 46.1
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 2.5e-71 273.5 339 44.8
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 4.2e-71 272.7 334 47.9
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 7.2e-71 271.9 334 46.1
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 3.6e-70 269.6 259 51.4
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 4.7e-70 269.2 217 60.8
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 1.0e-69 268.1 334 45.8
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 1.0e-69 268.1 334 45.8
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 6.8e-69 265.4 330 47.6
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 1.5e-68 264.2 335 46.9
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 3.4e-68 263.1 334 47.6
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 5.7e-68 262.3 335 46.3
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 8.3e-67 258.5 278 48.2
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 1.8e-66 257.3 359 42.9
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 1.8e-66 257.3 274 47.8
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 9.1e-66 255.0 308 48.7
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 3.5e-65 253.1 335 46.3
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 7.7e-65 251.9 241 53.1
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 1.7e-64 250.8 211 64.9
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 3.8e-64 249.6 245 53.9
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 3.3e-63 246.5 277 49.1
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 2.1e-62 243.8 240 52.5
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 8.0e-62 241.9 236 52.5
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 5.8e-52 209.1 207 50.2
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 9.8e-52 208.4 233 48.9
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 5.4e-50 202.6 210 51.9
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 1.5e-47 194.5 232 45.7
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 1.9e-47 194.1 150 60.0
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 2.5e-47 193.7 199 49.7
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 3.3e-47 193.4 203 51.2
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 5.2e-45 186.0 232 44.8
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.7e-43 181.0 233 45.1
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 4.1e-42 176.4 194 49.5
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 7.0e-42 175.6 336 35.7
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 4.6e-41 172.9 138 62.3
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.8e-38 163.7 143 57.3
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 3.6e-38 163.3 199 42.7
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 3.4e-36 156.8 126 57.9
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 4.9e-27 126.3 86 75.6
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 1.4e-26 124.8 184 40.8
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 4.2e-18 96.7 86 60.5
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 8.1e-14 82.4 201 29.9
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 3.7e-06 57.0 42 66.7


User provided reference genes

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