Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00787 Vaccinium macrocarpon HOM05D001470 ORTHO05D006756 4.1e-66 254.6 131 100.0
Dinv27288 Davidia involucrata HOM05D001470 ORTHO05D006756 4.6e-57 224.6 131 87.8
vmacro00847 Vaccinium macrocarpon HOM05D001470 ORTHO05D006756 1.0e-56 223.4 124 91.9
CSS0038151 Camellia sinensis var. sinensis HOM05D001470 ORTHO05D006756 1.3e-56 223.0 131 88.5
CSS0043529 Camellia sinensis var. sinensis HOM05D001470 ORTHO05D006756 1.3e-56 223.0 131 88.5
RcHm_v2.0_Chr6g0296261 Rosa chinensis HOM05D001470 ORTHO05D006756 1.5e-55 219.5 131 86.3
CSS0028817 Camellia sinensis var. sinensis HOM05D001470 ORTHO05D006756 1.9e-55 219.2 131 87.8
Prupe.1G493300 Prunus persica HOM05D001470 ORTHO05D006756 1.9e-55 219.2 131 84.0
FvH4_2g27410 Fragaria vesca HOM05D001470 ORTHO05D006756 7.3e-55 217.2 131 85.5
arahy.Tifrunner.gnm1.ann1.D58UPY Arachis hypogaea HOM05D001470 ORTHO05D006756 9.5e-55 216.9 132 86.4
Thecc.08G128800 Theobroma cacao HOM05D001470 ORTHO05D006756 9.5e-55 216.9 131 86.3
Duzib116G0621 Durio zibethinus HOM05D001470 ORTHO05D006756 2.1e-54 215.7 131 85.5
FAN15G1146 Fragaria x ananassa HOM05D001470 ORTHO05D006756 2.1e-54 215.7 131 84.7
arahy.Tifrunner.gnm1.ann1.0P0L33 Arachis hypogaea HOM05D001470 ORTHO05D006756 2.8e-54 215.3 132 85.6
Ciclev10001597m.g Citrus clementina HOM05D001470 ORTHO05D006756 3.6e-54 214.9 131 84.7
Duzib093G0261 Durio zibethinus HOM05D001470 ORTHO05D006756 3.6e-54 214.9 129 86.0
GSVIVG01008841001 Vitis vinifera HOM05D001470 ORTHO05D006756 3.6e-54 214.9 131 85.5
Actinidia03460 Actinidia chinensis HOM05D001470 ORTHO05D006756 4.7e-54 214.5 131 84.7
CiPaw.16G026200 Carya illinoinensis HOM05D001470 ORTHO05D006756 4.7e-54 214.5 131 85.5
TAR628G0775 Trochodendron aralioides HOM05D001470 ORTHO05D006756 1.4e-53 213.0 131 81.7
PGR044G0286 Punica granatum HOM05D001470 ORTHO05D006756 2.3e-53 212.2 131 83.2
MD00G1028800 Malus domestica HOM05D001470 ORTHO05D006756 3.1e-53 211.8 131 83.2
AUR62014313 Chenopodium quinoa HOM05D001470 ORTHO05D006756 4.0e-53 211.5 131 82.4
Lj4A633G16 Lonicera japonica HOM05D001470 ORTHO05D006756 4.0e-53 211.5 131 84.0
Nitab4.5_0005296g0020 Nicotiana tabacum HOM05D001470 ORTHO05D006756 4.0e-53 211.5 131 83.2
Peaxi162Scf00051g01416 Petunia axillaris HOM05D001470 ORTHO05D006756 4.0e-53 211.5 131 84.0
QL09p033894 Quercus lobata HOM05D001470 ORTHO05D006756 5.2e-53 211.1 129 83.7
TWI60G1154 Tripterygium wilfordii HOM05D001470 ORTHO05D006756 5.2e-53 211.1 131 84.0
Ah.05g170940 Amaranthus hybridus HOM05D001470 ORTHO05D006756 6.8e-53 210.7 131 82.4
Gohir.D05G238900 Gossypium hirsutum HOM05D001470 ORTHO05D006756 6.8e-53 210.7 131 82.4
Gorai.009G247600 Gossypium raimondii HOM05D001470 ORTHO05D006756 6.8e-53 210.7 131 82.4
TWI32G1289 Tripterygium wilfordii HOM05D001470 ORTHO05D006756 6.8e-53 210.7 130 83.8
Haze_17510 Corylus avellana HOM05D001470 ORTHO05D006756 1.2e-52 209.9 129 84.5
TAR376G0409 Trochodendron aralioides HOM05D001470 ORTHO05D006756 1.2e-52 209.9 131 81.7
Eucgr.F04342 Eucalyptus grandis HOM05D001470 ORTHO05D006756 1.5e-52 209.5 131 81.7
Lsat_1_v5_gn_3_34541 Lactuca sativa HOM05D001470 ORTHO05D006756 1.5e-52 209.5 131 82.4
Nitab4.5_0000322g0050 Nicotiana tabacum HOM05D001470 ORTHO05D006756 1.5e-52 209.5 129 82.9
Psat5g086560 Pisum sativum HOM05D001470 ORTHO05D006756 1.5e-52 209.5 129 82.2
MSTRG.25372 Avicennia marina HOM05D001470 ORTHO05D006756 2.0e-52 209.1 131 80.9
Potri.002G081200 Populus trichocarpa HOM05D001470 ORTHO05D006756 2.0e-52 209.1 131 81.7
Glyma.04G248900 Glycine max HOM05D001470 ORTHO05D006756 2.6e-52 208.8 129 83.7
Nn5g28359 Nelumbo nucifera HOM05D001470 ORTHO05D006756 2.6e-52 208.8 131 82.4
Lalb_Chr11g0065951 Lupinus albus HOM05D001470 ORTHO05D006756 3.4e-52 208.4 131 82.4
AUR62019054 Chenopodium quinoa HOM05D001470 ORTHO05D006756 4.4e-52 208.0 131 81.7
SGA_v2.0_scaffold52G18953 Striga asiatica HOM05D001470 ORTHO05D006756 4.4e-52 208.0 131 81.7
Cfa018570 Carpinus fangiana HOM05D001470 ORTHO05D006756 5.8e-52 207.6 129 83.7
Manes.18G079501 Manihot esculenta HOM05D001470 ORTHO05D006756 5.8e-52 207.6 129 81.4
Sabra02G0063600 Salix brachista HOM05D001470 ORTHO05D006756 5.8e-52 207.6 131 80.9
Oeu037225.1 Olea europaea HOM05D001470 ORTHO05D006756 7.6e-52 207.2 131 81.7
Solyc06g060150.3 Solanum lycopersicum HOM05D001470 ORTHO05D006756 7.6e-52 207.2 131 80.9
Sopen06g020270 Solanum pennellii HOM05D001470 ORTHO05D006756 7.6e-52 207.2 131 80.9
THA.LOC104800207 Tarenaya hassleriana HOM05D001470 ORTHO05D006756 7.6e-52 207.2 131 80.2
Cc10_g12180 Coffea canephora HOM05D001470 ORTHO05D006756 9.9e-52 206.8 131 79.4
HanXRQChr17g0541081 Helianthus annuus HOM05D001470 ORTHO05D006756 9.9e-52 206.8 131 80.9
BcaB05g25051 Brassica carinata HOM05D001470 ORTHO05D006756 1.3e-51 206.5 131 80.2
ClCG00G002270 Citrullus lanatus HOM05D001470 ORTHO05D006756 1.3e-51 206.5 131 80.2
Glyma.06G114100 Glycine max HOM05D001470 ORTHO05D006756 1.3e-51 206.5 129 82.9
Medtr3g088120 Medicago truncatula HOM05D001470 ORTHO05D006756 1.3e-51 206.5 129 79.8
BcaB02g07107 Brassica carinata HOM05D001470 ORTHO05D006756 1.7e-51 206.1 131 78.6
BraA07t30444Z Brassica rapa HOM05D001470 ORTHO05D006756 1.7e-51 206.1 131 78.6
Gohir.A05G236800 Gossypium hirsutum HOM05D001470 ORTHO05D006756 1.7e-51 206.1 131 80.9
Lj1g0008455 Lotus japonicus HOM05D001470 ORTHO05D006756 1.7e-51 206.1 129 80.6
Phvul.009G126000 Phaseolus vulgaris HOM05D001470 ORTHO05D006756 1.7e-51 206.1 129 81.4
SalBow7G2997 Salvia bowleyana HOM05D001470 ORTHO05D006756 2.2e-51 205.7 131 80.2
BcaC08g45476 Brassica carinata HOM05D001470 ORTHO05D006756 2.9e-51 205.3 131 78.6
C06p31240 Brassica napus HOM05D001470 ORTHO05D006756 2.9e-51 205.3 131 77.9
BolC6t38263H Brassica oleracea HOM05D001470 ORTHO05D006756 2.9e-51 205.3 131 78.6
BraA02t07148Z Brassica rapa HOM05D001470 ORTHO05D006756 2.9e-51 205.3 131 79.4
C02p34610 Brassica napus HOM05D001470 ORTHO05D006756 3.7e-51 204.9 131 79.4
CARHR070990 Cardamine hirsuta HOM05D001470 ORTHO05D006756 3.7e-51 204.9 131 79.4
Ca_16563_v3 Cicer arietinum L. HOM05D001470 ORTHO05D006756 3.7e-51 204.9 129 80.6
A07p27990 Brassica napus HOM05D001470 ORTHO05D006756 4.9e-51 204.5 131 78.6
Atru.chr13.1511 Acer truncatum HOM05D001470 ORTHO05D006756 6.4e-51 204.1 129 81.4
Aa31LG4G7480 Aethionema arabicum HOM05D001470 ORTHO05D006756 6.4e-51 204.1 131 78.6
Sp5g32630 Schrenkiella parvula HOM05D001470 ORTHO05D006756 8.4e-51 203.8 131 78.6
A02p21300 Brassica napus HOM05D001470 ORTHO05D006756 1.1e-50 203.4 131 79.4
SGA_v2.0_scaffold24G10439 Striga asiatica HOM05D001470 ORTHO05D006756 1.4e-50 203.0 130 78.5
CsaV3_6G034260 Cucumis sativus L. HOM05D001470 ORTHO05D006756 3.2e-50 201.8 131 78.6
BcaC03g15740 Brassica carinata HOM05D001470 ORTHO05D006756 4.1e-50 201.4 131 77.9
BolC2t09486H Brassica oleracea HOM05D001470 ORTHO05D006756 4.1e-50 201.4 131 77.9
Migut.C01109 Erythranthe guttata HOM05D001470 ORTHO05D006756 5.4e-50 201.1 131 77.9
Aqoxy6G00254 Aquilegia oxysepala HOM05D001470 ORTHO05D006756 7.1e-50 200.7 131 78.6
CANSAT25G1662 Cannabis sativa HOM05D001470 ORTHO05D006756 7.1e-50 200.7 129 80.6
Cpa.g.sc64.112 Carica papaya HOM05D001470 ORTHO05D006756 7.1e-50 200.7 150 72.7
Thhalv10018756m.g Eutrema salsugineum HOM05D001470 ORTHO05D006756 7.1e-50 200.7 131 77.9
Os02g0775200 Oryza sativa ssp. japonica HOM05D001470 ORTHO05D006756 9.2e-50 200.3 129 78.3
Gohir.A06G118900 Gossypium hirsutum HOM05D001470 ORTHO05D006756 1.6e-49 199.5 131 80.2
Rhsim11G0069700 Rhododendron simsii HOM05D001470 ORTHO05D006756 1.6e-49 199.5 203 57.6
Zm00001eb256550 Zea mays HOM05D001470 ORTHO05D006756 1.6e-49 199.5 131 77.9
FAN20G1865 Fragaria x ananassa HOM05D001470 ORTHO05D006756 2.1e-49 199.1 129 79.8
CDE06G1142 Ceratophyllum demersum HOM05D001470 ORTHO05D006756 2.7e-49 198.7 130 78.5
EL10Ac1g01041 Beta vulgaris HOM05D001470 ORTHO05D006756 3.5e-49 198.4 131 77.9
CAN.G643.4 Capsicum annuum HOM05D001470 ORTHO05D006756 3.5e-49 198.4 124 80.6
Sc07g0004500 Simmondsia chinensis HOM05D001470 ORTHO05D006756 1.0e-48 196.8 131 74.8
PSO170G0410 Papaver somniferum HOM05D001470 ORTHO05D006756 8.6e-48 193.7 131 74.8
ATR0709G002 Amborella trichopoda HOM05D001470 ORTHO05D006756 4.3e-47 191.4 131 73.3
AL2G37670 Arabidopsis lyrata HOM05D001470 ORTHO05D006756 7.3e-47 190.7 138 71.0
Carub.0002s2436 Capsella rubella HOM05D001470 ORTHO05D006756 9.6e-47 190.3 151 66.9
MBI06_g04545_MAGBIO Magnolia biondii HOM05D001470 ORTHO05D006756 9.6e-47 190.3 131 76.3
ClCG08G005860 Citrullus lanatus HOM05D001470 ORTHO05D006756 1.6e-46 189.5 121 78.5
AT1G77470 Arabidopsis thaliana HOM05D001470 ORTHO05D006756 2.8e-46 188.7 138 68.1
ECA246G2621 Erigeron canadensis HOM05D001470 ORTHO05D006756 5.2e-45 184.5 124 76.6
unitig_22.g5493 Utricularia gibba HOM05D001470 ORTHO05D006756 8.9e-45 183.7 130 72.3
PSO528G0178 Papaver somniferum HOM05D001470 ORTHO05D006756 1.2e-44 183.3 131 73.3
Pp3c13_4510 Physcomitrium patens HOM05D001470 ORTHO05D006756 2.1e-41 172.6 131 67.2
BraA02t07163Z Brassica rapa HOM05D001470 ORTHO05D006756 4.6e-41 171.4 132 69.7
Mapoly0024s0100 Marchantia polymorpha HOM05D001470 ORTHO05D006756 1.5e-39 166.4 130 63.8
Hma1.2p1_0129F.1_g060430 Hydrangea macrophylla HOM05D001470 ORTHO05D006756 1.6e-38 162.9 99 84.8
SMO329G0082 Selaginella moellendorffii HOM05D001470 ORTHO05D006756 3.4e-36 155.2 131 61.1
SHI31507 Sapria himalayana HOM05D001470 ORTHO05D006756 2.2e-35 152.5 125 65.6
Hund17307 Selenicereus undatus HOM05D001470 ORTHO05D006756 8.4e-35 150.6 99 78.8
TPR.G40868 Trifolium pratense HOM05D001470 ORTHO05D006756 8.4e-35 150.6 98 78.6
COL.COLO4_37945 Corchorus olitorius HOM05D001470 ORTHO05D006756 1.1e-31 140.2 123 66.7
CBR_g61472 Chara braunii HOM05D001470 ORTHO05D006756 2.5e-31 139.0 116 56.0
SEGI_11240 Sequoiadendron giganteum HOM05D001470 ORTHO05D006756 4.3e-31 138.3 98 72.4
FAN24G1004 Fragaria x ananassa HOM05D001470 ORTHO05D006756 5.3e-29 131.3 88 79.5
Cre12.g527300 Chlamydomonas reinhardtii HOM05D001470 ORTHO05D006756 1.1e-26 123.6 131 48.9
Hma1.2p1_0054F.1_g031130 Hydrangea macrophylla HOM05D001470 ORTHO05D006756 1.1e-26 123.6 75 84.0
Potri.005G180001 Populus trichocarpa HOM05D001470 ORTHO05D006756 2.1e-25 119.4 110 60.9
PRCOL_00000131 Prasinoderma coloniale HOM05D001470 ORTHO05D006756 4.6e-25 118.2 132 48.5
MCO13G571 Micromonas commoda HOM05D001470 ORTHO05D006756 4.0e-21 105.1 133 42.9
Gohir.A04G057126 Gossypium hirsutum HOM05D001470 ORTHO05D006756 5.5e-18 94.7 53 86.8
Hma1.2p1_0129F.1_g060420 Hydrangea macrophylla HOM05D001470 ORTHO05D006756 1.0e-16 90.5 55 81.8
MD15G1345300 Malus domestica HOM05D001470 ORTHO05D006756 1.0e-16 90.5 55 83.6
arahy.Tifrunner.gnm1.ann1.8CL4NV Arachis hypogaea HOM05D000112 ORTHO05D000201 2.5e-15 85.9 62 67.7
DCAR_026835 Daucus carota HOM05D001470 ORTHO05D006756 5.7e-15 84.7 48 87.5
Sed0023365 Sechium edule HOM05D001470 ORTHO05D006756 7.4e-15 84.3 54 77.8
AagrBONN_evm.TU.Sc2ySwM_344.153 Anthoceros agrestis HOM05D001470 ORTHO05D006756 8.2e-14 80.9 55 70.9
Haze_27319 Corylus avellana HOM05D001470 ORTHO05D006756 7.6e-12 74.3 125 29.6
MD15G1345200 Malus domestica HOM05D001470 ORTHO05D006756 1.1e-10 70.5 41 82.9
SGA_v2.0_scaffold8G04242 Striga asiatica HOM05D001470 ORTHO05D006756 9.3e-10 67.4 53 69.8
Cfa025569 Carpinus fangiana HOM05D001470 ORTHO05D006756 4.6e-09 65.1 143 28.7
AagrBONN_evm.TU.Sc2ySwM_368.91 Anthoceros agrestis HOM05D001470 ORTHO05D006756 6.1e-09 64.7 62 46.8


User provided reference genes

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