Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00507 Vaccinium macrocarpon HOM05D003979 ORTHO05D005530 0.0e+00 1320.8 663 100.0
RhsimUnG0135800 Rhododendron simsii HOM05D003979 ORTHO05D005530 6.0e-214 748.0 428 89.7
RhsimUnG0180900 Rhododendron simsii HOM05D003979 ORTHO05D005530 6.0e-214 748.0 428 89.7
Actinidia35951 Actinidia chinensis HOM05D003979 ORTHO05D005530 5.6e-204 714.9 403 89.3
Actinidia34623 Actinidia chinensis HOM05D003979 ORTHO05D005530 6.2e-203 711.4 403 88.8
CSS0040719 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 1.4e-199 700.3 403 85.9
CSS0027237 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 7.1e-199 698.0 403 85.6
Dinv38268 Davidia involucrata HOM05D003979 ORTHO05D005530 7.1e-199 698.0 403 86.6
HanXRQChr02g0059571 Helianthus annuus HOM05D003979 ORTHO05D005530 2.1e-198 696.4 402 85.1
Hma1.2p1_0691F.1_g204250 Hydrangea macrophylla HOM05D003979 ORTHO05D005530 1.0e-197 694.1 403 86.6
TAR365G0531 Trochodendron aralioides HOM05D003979 ORTHO05D005530 1.0e-197 694.1 403 85.9
MSTRG.24631 Avicennia marina HOM05D003979 ORTHO05D005530 1.8e-197 693.3 403 85.4
PGSC0003DMG400019163 Solanum tuberosum HOM05D003979 ORTHO05D005530 3.9e-197 692.2 403 84.6
Cc02_g25590 Coffea canephora HOM05D003979 ORTHO05D005530 6.7e-197 691.4 403 85.4
Cc03_g07310 Coffea canephora HOM05D003979 ORTHO05D005530 1.1e-196 690.6 402 85.8
Solyc12g043020.2 Solanum lycopersicum HOM05D003979 ORTHO05D005530 3.3e-196 689.1 403 84.9
DCAR_031519 Daucus carota HOM05D003979 ORTHO05D005530 5.7e-196 688.3 403 85.4
Sopen12g022260 Solanum pennellii HOM05D003979 ORTHO05D005530 5.7e-196 688.3 403 84.9
Hund24848 Selenicereus undatus HOM05D003979 ORTHO05D005530 6.3e-195 684.9 403 83.6
Solyc05g053540.3 Solanum lycopersicum HOM05D003979 ORTHO05D005530 6.3e-195 684.9 403 84.1
AUR62020350 Chenopodium quinoa HOM05D003979 ORTHO05D005530 8.2e-195 684.5 403 83.6
HanXRQChr14g0435331 Helianthus annuus HOM05D003979 ORTHO05D005530 1.8e-194 683.3 403 84.4
Sopen05g032060 Solanum pennellii HOM05D003979 ORTHO05D005530 1.8e-194 683.3 403 83.9
Haze_11573 Corylus avellana HOM05D003979 ORTHO05D005530 2.4e-194 682.9 400 84.8
GSVIVG01029073001 Vitis vinifera HOM05D003979 ORTHO05D005530 3.1e-194 682.6 403 84.6
AUR62015873 Chenopodium quinoa HOM05D003979 ORTHO05D005530 6.9e-194 681.4 403 83.4
Migut.N00344 Erythranthe guttata HOM05D003979 ORTHO05D005530 9.0e-194 681.0 403 83.4
Ciclev10004565m.g Citrus clementina HOM05D003979 ORTHO05D005530 1.5e-193 680.2 403 83.6
Oeu022336.1 Olea europaea HOM05D003979 ORTHO05D005530 1.5e-193 680.2 403 85.4
Nn1g03146 Nelumbo nucifera HOM05D003979 ORTHO05D005530 4.5e-193 678.7 403 84.4
CDE04G1626 Ceratophyllum demersum HOM05D003979 ORTHO05D005530 7.6e-193 677.9 403 83.6
CiPaw.02G067900 Carya illinoinensis HOM05D003979 ORTHO05D005530 2.2e-192 676.4 403 82.9
Cfa014896 Carpinus fangiana HOM05D003979 ORTHO05D005530 3.8e-192 675.6 403 83.4
Thecc.04G210300 Theobroma cacao HOM05D003979 ORTHO05D005530 5.0e-192 675.2 403 82.9
QL07p012465 Quercus lobata HOM05D003979 ORTHO05D005530 1.1e-191 674.1 402 82.6
Lsat_1_v5_gn_6_63381 Lactuca sativa HOM05D003979 ORTHO05D005530 1.4e-191 673.7 402 83.1
CAN.G765.2 Capsicum annuum HOM05D003979 ORTHO05D005530 2.5e-191 672.9 411 81.8
Medtr2g089340 Medicago truncatula HOM05D003979 ORTHO05D005530 2.5e-191 672.9 403 81.6
Duzib212G0229 Durio zibethinus HOM05D003979 ORTHO05D005530 3.2e-191 672.5 403 83.1
PSO063G3024 Papaver somniferum HOM05D003979 ORTHO05D005530 7.2e-191 671.4 403 82.6
PSO017G0981 Papaver somniferum HOM05D003979 ORTHO05D005530 1.6e-190 670.2 403 82.1
ECA233G3228 Erigeron canadensis HOM05D003979 ORTHO05D005530 2.1e-190 669.8 403 83.1
Peaxi162Scf00073g02029 Petunia axillaris HOM05D003979 ORTHO05D005530 2.7e-190 669.5 403 83.1
ClCG05G003530 Citrullus lanatus HOM05D003979 ORTHO05D005530 3.6e-190 669.1 403 82.4
Potri.001G051700 Populus trichocarpa HOM05D003979 ORTHO05D005530 3.6e-190 669.1 403 81.9
Duzib151G0303 Durio zibethinus HOM05D003979 ORTHO05D005530 6.1e-190 668.3 403 81.9
Lalb_Chr18g0056121 Lupinus albus HOM05D003979 ORTHO05D005530 6.1e-190 668.3 403 81.4
Potri.003G176600 Populus trichocarpa HOM05D003979 ORTHO05D005530 6.1e-190 668.3 403 82.1
HPP92_025762 Vanilla planifolia HOM05D003979 ORTHO05D005530 6.1e-190 668.3 403 81.4
MELO3C006331.2 Cucumis melo HOM05D003979 ORTHO05D005530 7.9e-190 667.9 403 82.1
CsaV3_3G011200 Cucumis sativus L. HOM05D003979 ORTHO05D005530 1.3e-189 667.2 403 82.4
Glyma.13G207900 Glycine max HOM05D003979 ORTHO05D005530 1.8e-189 666.8 403 81.6
EL10Ac4g07703 Beta vulgaris HOM05D003979 ORTHO05D005530 2.3e-189 666.4 436 77.5
RcHm_v2.0_Chr1g0328531 Rosa chinensis HOM05D003979 ORTHO05D005530 2.3e-189 666.4 403 80.9
Sed0009934 Sechium edule HOM05D003979 ORTHO05D005530 3.0e-189 666.0 403 81.9
COL.COLO4_20310 Corchorus olitorius HOM05D003979 ORTHO05D005530 6.7e-189 664.8 403 82.1
Sc25g0005860 Simmondsia chinensis HOM05D003979 ORTHO05D005530 6.7e-189 664.8 403 81.9
TAR624G0299 Trochodendron aralioides HOM05D003979 ORTHO05D005530 6.7e-189 664.8 386 85.8
Gorai.005G035200 Gossypium raimondii HOM05D003979 ORTHO05D005530 8.7e-189 664.5 403 82.1
Sabra01G0036200 Salix brachista HOM05D003979 ORTHO05D005530 8.7e-189 664.5 403 81.9
Ca_00636_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 1.5e-188 663.7 403 80.9
Ca_29705_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 1.5e-188 663.7 403 80.9
Gohir.D02G031700 Gossypium hirsutum HOM05D003979 ORTHO05D005530 1.9e-188 663.3 403 81.9
Lj6g0025731 Lotus japonicus HOM05D003979 ORTHO05D005530 1.9e-188 663.3 403 80.9
Ah.04g166150 Amaranthus hybridus HOM05D003979 ORTHO05D005530 4.3e-188 662.1 394 83.5
ATR0787G169 Amborella trichopoda HOM05D003979 ORTHO05D005530 4.3e-188 662.1 403 81.4
Duzib268G0146 Durio zibethinus HOM05D003979 ORTHO05D005530 7.4e-188 661.4 403 81.4
Psat1g182280 Pisum sativum HOM05D003979 ORTHO05D005530 7.4e-188 661.4 403 80.1
Aqoxy2G03779 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 9.7e-188 661.0 403 81.6
VMungo0540G1831 Vigna mungo HOM05D003979 ORTHO05D005530 1.3e-187 660.6 403 80.1
arahy.Tifrunner.gnm1.ann1.ZGF32Z Arachis hypogaea HOM05D003979 ORTHO05D005530 1.6e-187 660.2 403 80.1
Gohir.A02G024400 Gossypium hirsutum HOM05D003979 ORTHO05D005530 1.6e-187 660.2 403 81.9
Phvul.006G152700 Phaseolus vulgaris HOM05D003979 ORTHO05D005530 1.6e-187 660.2 403 79.9
FvH4_7g04190 Fragaria vesca HOM05D003979 ORTHO05D005530 2.2e-187 659.8 403 80.1
FAN06G4745 Fragaria x ananassa HOM05D003979 ORTHO05D005530 2.2e-187 659.8 403 80.1
Gohir.A10G121600 Gossypium hirsutum HOM05D003979 ORTHO05D005530 3.7e-187 659.1 403 81.6
MD04G1003600 Malus domestica HOM05D003979 ORTHO05D005530 3.7e-187 659.1 403 81.1
Manes.15G050825 Manihot esculenta HOM05D003979 ORTHO05D005530 3.7e-187 659.1 403 81.4
FAN01G2046 Fragaria x ananassa HOM05D003979 ORTHO05D005530 4.8e-187 658.7 403 80.1
FAN10G0585 Fragaria x ananassa HOM05D003979 ORTHO05D005530 6.3e-187 658.3 403 80.1
Prupe.1G003100 Prunus persica HOM05D003979 ORTHO05D005530 6.3e-187 658.3 403 81.1
THA.LOC104808724 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 8.2e-187 657.9 403 80.9
Aqoxy5G02610 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 1.4e-186 657.1 403 81.1
AUR62017196 Chenopodium quinoa HOM05D003979 ORTHO05D005530 1.8e-186 656.8 418 78.5
Os08g0559600 Oryza sativa ssp. japonica HOM05D003979 ORTHO05D005530 3.1e-186 656.0 403 80.1
CANSAT78G1204 Cannabis sativa HOM05D003979 ORTHO05D005530 4.1e-186 655.6 403 80.9
CiPaw.01G125500 Carya illinoinensis HOM05D003979 ORTHO05D005530 4.1e-186 655.6 403 80.4
Zm00001eb175970 Zea mays HOM05D003979 ORTHO05D005530 5.3e-186 655.2 403 79.9
Zm00001eb039310 Zea mays HOM05D003979 ORTHO05D005530 1.2e-185 654.1 403 79.9
CARHR100330 Cardamine hirsuta HOM05D003979 ORTHO05D005530 4.5e-185 652.1 403 80.6
Carub.0003s2458 Capsella rubella HOM05D003979 ORTHO05D005530 7.7e-185 651.4 403 80.4
Thhalv10002451m.g Eutrema salsugineum HOM05D003979 ORTHO05D005530 7.7e-185 651.4 403 80.6
BcaB06g26604 Brassica carinata HOM05D003979 ORTHO05D005530 2.9e-184 649.4 403 80.9
PGR031G0232 Punica granatum HOM05D003979 ORTHO05D005530 2.9e-184 649.4 403 80.9
THA.LOC104804817 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 3.8e-184 649.0 403 79.9
A07p08130 Brassica napus HOM05D003979 ORTHO05D005530 5.0e-184 648.7 403 80.6
BraA07t28596Z Brassica rapa HOM05D003979 ORTHO05D005530 5.0e-184 648.7 403 80.6
Sp3g22010 Schrenkiella parvula HOM05D003979 ORTHO05D005530 1.1e-183 647.5 403 80.4
BcaB04g20393 Brassica carinata HOM05D003979 ORTHO05D005530 1.4e-183 647.1 403 80.4
C01p39410 Brassica napus HOM05D003979 ORTHO05D005530 1.4e-183 647.1 403 80.4
BolC1t03890H Brassica oleracea HOM05D003979 ORTHO05D005530 1.4e-183 647.1 403 80.4
AT3G23940 Arabidopsis thaliana HOM05D003979 ORTHO05D005530 1.9e-183 646.7 403 79.9
BcaC06g35668 Brassica carinata HOM05D003979 ORTHO05D005530 3.2e-183 646.0 403 80.4
C07p12270 Brassica napus HOM05D003979 ORTHO05D005530 3.2e-183 646.0 403 80.4
BraA01t03222Z Brassica rapa HOM05D003979 ORTHO05D005530 3.2e-183 646.0 403 80.1
AL3G39610 Arabidopsis lyrata HOM05D003979 ORTHO05D005530 5.5e-183 645.2 403 79.7
A01p30940 Brassica napus HOM05D003979 ORTHO05D005530 7.2e-183 644.8 403 79.9
Aa31LG8G10930 Aethionema arabicum HOM05D003979 ORTHO05D005530 9.4e-183 644.4 403 79.4
Peaxi162Scf00536g00915 Petunia axillaris HOM05D003979 ORTHO05D005530 7.9e-182 641.3 403 80.1
SEGI_04002 Sequoiadendron giganteum HOM05D003979 ORTHO05D005530 2.3e-181 639.8 416 76.7
Cpa.g.sc59.101 Carica papaya HOM05D003979 ORTHO05D005530 5.1e-181 638.6 386 82.1
MBI07_g21060_MAGBIO Magnolia biondii HOM05D003979 ORTHO05D005530 8.8e-181 637.9 470 70.6
BolC7t41694H Brassica oleracea HOM05D003979 ORTHO05D005530 7.4e-180 634.8 417 77.5
SGA_v2.0_scaffold31G12595 Striga asiatica HOM05D003979 ORTHO05D005530 2.8e-179 632.9 415 77.6
Nitab4.5_0001769g0010 Nicotiana tabacum HOM05D003979 ORTHO05D005530 1.8e-178 630.2 413 77.7
arahy.Tifrunner.gnm1.ann1.NX1XST Arachis hypogaea HOM05D003979 ORTHO05D005530 2.6e-177 626.3 403 76.7
HPP92_025735 Vanilla planifolia HOM05D003979 ORTHO05D005530 1.0e-176 624.4 403 77.7
SMO361G0245 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 2.5e-175 619.8 403 74.9
Hund11465 Selenicereus undatus HOM05D003979 ORTHO05D005530 4.2e-175 619.0 383 78.3
Pp3c11_18700 Physcomitrium patens HOM05D003979 ORTHO05D005530 5.2e-173 612.1 403 74.4
AUR62010687 Chenopodium quinoa HOM05D003979 ORTHO05D005530 4.4e-172 609.0 402 76.6
Mapoly0044s0128 Marchantia polymorpha HOM05D003979 ORTHO05D005530 4.8e-171 605.5 414 71.3
CBR_g16971 Chara braunii HOM05D003979 ORTHO05D005530 6.3e-171 605.1 403 72.7
unitig_899.g15534 Utricularia gibba HOM05D003979 ORTHO05D005530 1.2e-169 600.9 408 76.0
HPP92_025731 Vanilla planifolia HOM05D003979 ORTHO05D005530 2.2e-168 596.7 374 79.4
Gohir.D10G144500 Gossypium hirsutum HOM05D003979 ORTHO05D005530 9.4e-167 591.3 351 84.6
Gorai.011G161400 Gossypium raimondii HOM05D003979 ORTHO05D005530 1.6e-161 573.9 403 73.7
Nitab4.5_0001066g0080 Nicotiana tabacum HOM05D003979 ORTHO05D005530 2.7e-161 573.2 420 71.7
MCO11G076 Micromonas commoda HOM05D003979 ORTHO05D005530 9.8e-156 554.7 439 62.6
PRCOL_00005867 Prasinoderma coloniale HOM05D003979 ORTHO05D005530 6.3e-155 552.0 390 68.2
Cre03.g206600 Chlamydomonas reinhardtii HOM05D003979 ORTHO05D005530 1.4e-154 550.8 403 66.3
Lj6C614G9 Lonicera japonica HOM05D003979 ORTHO05D005530 5.5e-151 538.9 413 69.5
Atru.chr4.1774 Acer truncatum HOM05D003979 ORTHO05D005530 9.2e-146 521.5 403 67.5
TWI09G0393 Tripterygium wilfordii HOM05D003979 ORTHO05D005530 2.7e-145 520.0 403 66.7
SMO361G0819 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 3.0e-136 490.0 336 73.2
Cfa024863 Carpinus fangiana HOM05D003979 ORTHO05D005530 1.6e-129 467.6 403 58.6
AagrBONN_evm.TU.Sc2ySwM_228.3337 Anthoceros agrestis HOM05D003979 ORTHO05D005530 8.6e-128 461.8 306 73.5
Eucgr.C02488 Eucalyptus grandis HOM05D003979 ORTHO05D005530 5.2e-125 452.6 349 69.3
QL06p023475 Quercus lobata HOM05D003979 ORTHO05D005530 1.9e-122 444.1 272 81.6
QL07p030448 Quercus lobata HOM05D003979 ORTHO05D000106 1.0e-112 411.8 278 77.0
Cfa023757 Carpinus fangiana HOM05D003979 ORTHO05D005530 4.7e-110 402.9 433 50.1
Manes.03G150102 Manihot esculenta HOM05D003979 ORTHO05D005530 6.7e-96 355.9 285 64.6
Eucgr.H02826 Eucalyptus grandis HOM05D003979 ORTHO05D005530 4.5e-92 343.2 199 85.4
TPR.G30672 Trifolium pratense HOM05D003979 ORTHO05D005530 1.3e-88 331.6 224 72.8
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 4.5e-84 316.6 213 76.1
vmacro01853 Vaccinium macrocarpon HOM05D003979 ORTHO05D030713 1.1e-77 295.4 236 72.0
vmacro04995 Vaccinium macrocarpon HOM05D000208 ORTHO05D030713 2.5e-74 284.3 198 75.8
Eucgr.H02825 Eucalyptus grandis HOM05D003979 ORTHO05D015566 6.5e-67 259.6 150 83.3
vmacro07949 Vaccinium macrocarpon HOM05D000068 ORTHO05D000084 3.7e-62 243.8 118 94.9
Cfa020039 Carpinus fangiana HOM05D003979 ORTHO05D015566 1.6e-57 228.4 131 83.2
Duzib268G0265 Durio zibethinus HOM05D003979 ORTHO05D015566 6.1e-57 226.5 133 79.7
Oeu022341.1 Olea europaea HOM05D003979 ORTHO05D049433 4.8e-54 216.9 178 66.9
Cfa023448 Carpinus fangiana HOM05D003979 ORTHO05D123299 8.2e-54 216.1 416 35.3
THA.LOC104809102 Tarenaya hassleriana HOM05D003979 ORTHO05D049433 5.3e-53 213.4 116 91.4
Lsat_1_v5_gn_4_162440 Lactuca sativa HOM05D003979 ORTHO05D015566 6.7e-48 196.4 117 83.8
QL06p023466 Quercus lobata HOM05D003979 ORTHO05D015566 8.8e-48 196.1 114 80.7
PGSC0003DMG400028636 Solanum tuberosum HOM05D003979 ORTHO05D015566 8.8e-48 196.1 115 82.6
vmacro01475 Vaccinium macrocarpon HOM05D003979 ORTHO05D030713 1.6e-44 185.3 149 69.1
vmacro05929 Vaccinium macrocarpon HOM05D003979 ORTHO05D426723 2.0e-44 184.9 171 62.0
Eucgr.C02482 Eucalyptus grandis HOM05D003979 ORTHO05D015566 6.5e-43 179.9 115 75.7
Oeu006718.2 Olea europaea HOM05D003979 ORTHO05D005530 7.2e-42 176.4 105 85.7
vmacro09939 Vaccinium macrocarpon HOM05D000763 ORTHO05D030713 1.9e-34 151.8 189 53.4
Lsat_1_v5_gn_5_133441 Lactuca sativa HOM05D003979 ORTHO05D015566 7.3e-26 123.2 124 56.5
CAN.G12.21 Capsicum annuum HOM05D003979 ORTHO05D015566 3.6e-25 120.9 61 95.1
HanXRQChr14g0435341 Helianthus annuus HOM05D003979 ORTHO05D005530 1.8e-24 118.6 65 86.2
CAN.G12.20 Capsicum annuum HOM05D003979 ORTHO05D015566 6.8e-24 116.7 70 77.1
TPR.G35859 Trifolium pratense HOM05D003979 ORTHO05D015566 6.4e-22 110.2 56 94.6
vmacro06322 Vaccinium macrocarpon HOM05D000560 ORTHO05D000417 9.2e-21 106.3 65 80.0
SMO361G0618 Selaginella moellendorffii HOM05D003979 ORTHO05D015566 6.0e-20 103.6 220 33.2
TAR362G1054 Trochodendron aralioides HOM05D000447 ORTHO05D000315 1.7e-14 85.5 67 61.2
vmacro17907 Vaccinium macrocarpon HOM05D000224 ORTHO05D000337 1.5e-10 72.4 58 67.2
Aqoxy226s001 Aquilegia oxysepala HOM05D004107 ORTHO05D004738 2.1e-09 68.6 74 50.0
vmacro11290 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 1.3e-06 59.3 45 64.4


User provided reference genes

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