Gene: AT3G23940

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G23940
  • Transcript Identifier AT3G23940.1
  • Gene Type Coding gene
  • Location Chr3 : 8648780-8652323 : positive

Gene Family Information

  • ID HOM05D003979
  • #Genes/#Species 176/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G23940.1
  • Alias DHAD,Dihydroxyacid dehydratase
  • uniprot Q9LIR4

Descriptions

  • Description dehydratase family
  • Computational description dehydratase family; FUNCTIONS IN: copper ion binding, catalytic activity; INVOLVED IN: pollen development; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroxy-acid dehydratase (InterPro:IPR004404), Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site (InterPro:IPR020558), Dihydroxy-acid/6-phosphogluconate dehydratase (InterPro:IPR000581); Has 13943 Blast hits to 13934 proteins in 2322 species: Archae - 210; Bacteria - 7441; Metazoa - 5; Fungi - 304; Plants - 157; Viruses - 0; Other Eukaryotes - 5826 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008652
IEA
GOA Databasecellular amino acid biosynthetic process
GO:0009082
IEA
GOA Databasebranched-chain amino acid biosynthetic process
GO:0009082
IMP
IBA
Gene Ontologybranched-chain amino acid biosynthetic process1 2
GO:0009082
IEA
InterProbranched-chain amino acid biosynthetic process
GO:0009099
IEA
Gene Ontologyvaline biosynthetic process
GO:0009555
IMP
Gene Ontologypollen development3
GO:0009097
IEA
Gene Ontologyisoleucine biosynthetic process
GO:0009553
IMP
Gene Ontologyembryo sac development2
GO:0009651
IMP
Gene Ontologyresponse to salt stress2
GO:0048364
IMP
Gene Ontologyroot development2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005507
IDA
GOA Databasecopper ion binding
GO:0005507
HDA
Gene Ontologycopper ion binding4
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0004160
IEA
GOA Databasedihydroxy-acid dehydratase activity
GO:0004160
IBA
Gene Ontologydihydroxy-acid dehydratase activity1
GO:0004160
IEA
InterProdihydroxy-acid dehydratase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016836
TAS
Gene Ontologyhydro-lyase activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast5
GO:0009536
IDA
IEA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid6
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
IBA
Gene Ontologychloroplast stroma1 7
GO:0005829
RCA
Gene Ontologycytosol8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042096 Dihydroxy-acid dehydratase, C-terminal
IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase
IPR004404 Dihydroxy-acid dehydratase
IPR037237 IlvD/EDD, N-terminal domain
Mapman id Description
4.1.2.2.8.5 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.isoleucine.dihydroxy-acid dehydratase
4.1.3.2.3 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.dihydroxy-acid dehydratase