Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_93.g30710 Utricularia gibba HOM05D000104 ORTHO05D004363 1.8e-284 981.9 493 100.0
unitig_92.g28135 Utricularia gibba HOM05D000104 ORTHO05D004363 7.1e-252 873.6 439 100.0
Migut.A00510 Erythranthe guttata HOM05D000104 ORTHO05D004363 7.0e-143 511.5 465 60.9
SalBow4G3014 Salvia bowleyana HOM05D000104 ORTHO05D004363 5.6e-140 501.9 462 60.0
MSTRG.11830 Avicennia marina HOM05D000104 ORTHO05D004363 1.1e-138 497.7 455 59.3
SGA_v2.0_scaffold27G11711 Striga asiatica HOM05D000104 ORTHO05D004363 1.5e-132 477.2 474 56.5
Dinv37465 Davidia involucrata HOM05D000104 ORTHO05D004363 8.7e-125 451.4 470 55.1
Solyc08g074520.2 Solanum lycopersicum HOM05D000104 ORTHO05D004363 4.3e-124 449.1 467 52.9
Sopen08g023150 Solanum pennellii HOM05D000104 ORTHO05D004363 4.3e-124 449.1 467 53.1
CSS0023365 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D004363 6.2e-123 445.3 465 53.1
Thecc.05G236400 Theobroma cacao HOM05D000104 ORTHO05D004363 2.6e-121 439.9 471 53.5
Atru.chr2.1616 Acer truncatum HOM05D000104 ORTHO05D004363 9.9e-121 438.0 469 53.5
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 9.3e-119 431.4 492 50.6
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 1.2e-118 431.0 489 50.9
Gorai.013G197700 Gossypium raimondii HOM05D000104 ORTHO05D004363 3.5e-118 429.5 469 51.8
Gohir.A13G159800 Gossypium hirsutum HOM05D000104 ORTHO05D004363 7.8e-118 428.3 469 51.8
Gohir.D13G165000 Gossypium hirsutum HOM05D000104 ORTHO05D004363 3.9e-117 426.0 469 51.4
Duzib177G0255 Durio zibethinus HOM05D000104 ORTHO05D004363 2.1e-115 420.2 473 51.4
Ciclev10030472m.g Citrus clementina HOM05D000104 ORTHO05D004363 2.8e-115 419.9 462 52.6
FAN21G1945 Fragaria x ananassa HOM05D000104 ORTHO05D004363 2.8e-115 419.9 457 50.8
RcHm_v2.0_Chr5g0084181 Rosa chinensis HOM05D000104 ORTHO05D004363 1.1e-114 417.9 457 51.0
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.8e-114 417.2 457 50.5
Prupe.6G000100 Prunus persica HOM05D000104 ORTHO05D004363 2.4e-114 416.8 467 50.7
Manes.08G155800 Manihot esculenta HOM05D000104 ORTHO05D004363 6.9e-114 415.2 463 51.4
Cc11_g04400 Coffea canephora HOM05D000104 ORTHO05D004363 5.8e-113 412.1 497 49.3
Duzib128G0660 Durio zibethinus HOM05D000104 ORTHO05D004363 5.8e-113 412.1 472 51.7
COL.COLO4_33474 Corchorus olitorius HOM05D000104 ORTHO05D004363 7.6e-113 411.8 470 51.5
FvH4_3g46101 Fragaria vesca HOM05D000104 ORTHO05D004363 9.9e-113 411.4 457 50.3
Cfa017683 Carpinus fangiana HOM05D000104 ORTHO05D004363 1.7e-112 410.6 468 51.7
MD11G1000100 Malus domestica HOM05D000104 ORTHO05D004363 2.4e-111 406.8 459 51.0
TWI32G0549 Tripterygium wilfordii HOM05D000104 ORTHO05D004363 2.4e-111 406.8 462 52.2
Potri.013G068400 Populus trichocarpa HOM05D000104 ORTHO05D004363 4.2e-111 406.0 467 51.0
Glyma.12G002300 Glycine max HOM05D000104 ORTHO05D004363 1.6e-110 404.1 471 50.7
VMungo1127G2256 Vigna mungo HOM05D000104 ORTHO05D004363 6.0e-110 402.1 467 49.7
Lj3g0018732 Lotus japonicus HOM05D000104 ORTHO05D004363 6.7e-109 398.7 471 49.5
Oeu007492.1 Olea europaea HOM05D000104 ORTHO05D004363 1.5e-108 397.5 300 69.3
Lalb_Chr01g0000141 Lupinus albus HOM05D000104 ORTHO05D004363 4.3e-108 396.0 471 49.3
THA.LOC104819143 Tarenaya hassleriana HOM05D000104 ORTHO05D004363 5.6e-108 395.6 470 48.9
Medtr4g035100 Medicago truncatula HOM05D000104 ORTHO05D004363 7.4e-108 395.2 473 49.0
Glyma.09G234400 Glycine max HOM05D000104 ORTHO05D004363 1.3e-107 394.4 472 49.4
Peaxi162Scf00213g01732 Petunia axillaris HOM05D000104 ORTHO05D004363 2.1e-107 393.7 469 50.5
PSO832G0838 Papaver somniferum HOM05D000104 ORTHO05D004363 1.4e-106 391.0 468 49.8
Ca_19676_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004363 2.4e-106 390.2 471 48.4
vmacro00211 Vaccinium macrocarpon HOM05D000104 ORTHO05D004363 2.4e-106 390.2 528 45.1
Psat7g148080 Pisum sativum HOM05D000104 ORTHO05D004363 3.1e-106 389.8 471 49.3
Actinidia03314 Actinidia chinensis HOM05D000104 ORTHO05D004363 4.0e-106 389.4 466 47.6
ClCG05G011380 Citrullus lanatus HOM05D000104 ORTHO05D004363 4.0e-106 389.4 468 48.5
Nn3g17003 Nelumbo nucifera HOM05D000104 ORTHO05D004363 1.5e-105 387.5 466 47.4
Sabra13G0059700 Salix brachista HOM05D000104 ORTHO05D004363 2.0e-105 387.1 476 49.8
Phvul.011G002900 Phaseolus vulgaris HOM05D000104 ORTHO05D004363 2.6e-105 386.7 473 48.2
ECA240G3782 Erigeron canadensis HOM05D000104 ORTHO05D004363 3.8e-104 382.9 470 47.4
TPR.G31923 Trifolium pratense HOM05D000104 ORTHO05D004363 3.8e-104 382.9 471 47.3
CsaV3_3G021040 Cucumis sativus L. HOM05D000104 ORTHO05D004363 1.1e-103 381.3 468 48.1
CsaV3_4G017740 Cucumis sativus L. HOM05D000104 ORTHO05D004363 1.1e-103 381.3 468 48.1
MELO3C020235.2 Cucumis melo HOM05D000104 ORTHO05D004363 3.2e-103 379.8 482 46.7
AL5G35320 Arabidopsis lyrata HOM05D000104 ORTHO05D004363 9.3e-103 378.3 463 48.8
Dinv09441 Davidia involucrata HOM05D000104 ORTHO05D004363 3.5e-102 376.3 301 64.5
Eucgr.D01125 Eucalyptus grandis HOM05D000104 ORTHO05D004363 4.6e-102 375.9 483 46.6
AT3G54280 Arabidopsis thaliana HOM05D000104 ORTHO05D004363 1.0e-101 374.8 464 48.5
CARHR164200 Cardamine hirsuta HOM05D000104 ORTHO05D004363 1.8e-101 374.0 464 46.6
arahy.Tifrunner.gnm1.ann1.64GWQS Arachis hypogaea HOM05D000104 ORTHO05D004363 5.1e-101 372.5 526 45.1
Carub.0005s2087 Capsella rubella HOM05D000104 ORTHO05D004363 8.7e-101 371.7 464 47.2
HanXRQChr03g0082351 Helianthus annuus HOM05D000104 ORTHO05D004363 1.9e-100 370.5 470 45.5
BcaC02g09076 Brassica carinata HOM05D000104 ORTHO05D004363 2.1e-99 367.1 467 46.5
Sed0011777 Sechium edule HOM05D000104 ORTHO05D004363 2.1e-99 367.1 465 47.1
A09p47280 Brassica napus HOM05D000104 ORTHO05D004363 8.2e-99 365.2 464 45.9
PGR083G0814 Punica granatum HOM05D000104 ORTHO05D004363 8.2e-99 365.2 481 46.4
CANSAT35G1590 Cannabis sativa HOM05D000104 ORTHO05D004363 1.1e-98 364.8 492 45.7
BolC8t50557H Brassica oleracea HOM05D000104 ORTHO05D004363 1.8e-98 364.0 464 45.0
C08p29510 Brassica napus HOM05D000104 ORTHO05D004363 3.1e-98 363.2 464 45.7
Lsat_1_v5_gn_5_59321 Lactuca sativa HOM05D000104 ORTHO05D004363 3.1e-98 363.2 457 46.8
Aa31sc392G40 Aethionema arabicum HOM05D000104 ORTHO05D004363 5.3e-98 362.5 464 46.8
Thhalv10010052m.g Eutrema salsugineum HOM05D000104 ORTHO05D004363 9.0e-98 361.7 463 44.9
Sp5g08110 Schrenkiella parvula HOM05D000104 ORTHO05D004363 4.5e-97 359.4 464 45.5
BraA09t40189Z Brassica rapa HOM05D000104 ORTHO05D004363 2.2e-96 357.1 474 44.9
Aqoxy7G00075 Aquilegia oxysepala HOM05D000104 ORTHO05D004363 3.5e-94 349.7 515 44.1
HPP92_015726 Vanilla planifolia HOM05D000104 ORTHO05D004363 8.7e-93 345.1 466 44.4
GSVIVG01019359001 Vitis vinifera HOM05D000104 ORTHO05D004363 1.5e-92 344.4 299 61.5
SHI06790 Sapria himalayana HOM05D000190 ORTHO05D004363 5.7e-92 342.4 461 45.1
ATR0665G650 Amborella trichopoda HOM05D000104 ORTHO05D004363 2.0e-89 334.0 490 44.1
CiPaw.09G169600 Carya illinoinensis HOM05D000104 ORTHO05D004363 3.2e-87 326.6 440 45.9
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 6.7e-85 318.9 380 48.9
Hund23685 Selenicereus undatus HOM05D000104 ORTHO05D004363 1.1e-84 318.2 456 45.4
CDE06G1340 Ceratophyllum demersum HOM05D000104 ORTHO05D004363 2.0e-84 317.4 461 43.6
CAN.G195.24 Capsicum annuum HOM05D000104 ORTHO05D004363 1.8e-82 310.8 348 50.6
Zm00001eb297280 Zea mays HOM05D000104 ORTHO05D004363 4.1e-82 309.7 473 43.8
AUR62016963 Chenopodium quinoa HOM05D000104 ORTHO05D004363 5.3e-82 309.3 462 43.3
AUR62014777 Chenopodium quinoa HOM05D000104 ORTHO05D004363 6.9e-82 308.9 464 43.1
SEGI_24237 Sequoiadendron giganteum HOM05D000104 ORTHO05D004363 1.2e-81 308.1 480 41.7
Sc05g0007890 Simmondsia chinensis HOM05D000104 ORTHO05D004363 1.4e-77 294.7 454 42.5
MD03G1000600 Malus domestica HOM05D000104 ORTHO05D004363 2.6e-76 290.4 269 56.5
AagrBONN_evm.TU.Sc2ySwM_228.1549 Anthoceros agrestis HOM05D000104 ORTHO05D004363 1.7e-75 287.7 485 38.6
Ah.14g089210 Amaranthus hybridus HOM05D000104 ORTHO05D004363 2.4e-74 283.9 464 41.8
Mapoly0038s0059 Marchantia polymorpha HOM05D000104 ORTHO05D004363 3.6e-70 270.0 496 38.9
Haze_20464 Corylus avellana HOM05D000104 ORTHO05D004363 3.5e-65 253.4 389 43.4
Pp3c3_11220 Physcomitrium patens HOM05D000104 ORTHO05D004363 4.2e-63 246.5 318 46.9
Cpa.g.sc73.37 Carica papaya HOM05D000104 ORTHO05D004363 1.4e-61 241.5 349 43.6
C04p38160 Brassica napus HOM05D000104 ORTHO05D004363 4.4e-60 236.5 348 43.7
arahy.Tifrunner.gnm1.ann1.YM0GIL Arachis hypogaea HOM05D000104 ORTHO05D004363 5.7e-60 236.1 221 57.9
BolC4t25391H Brassica oleracea HOM05D000104 ORTHO05D004363 1.1e-58 231.9 345 43.5
SGA_v2.0_scaffold269G46291 Striga asiatica HOM05D000104 ORTHO05D004363 1.9e-55 221.1 460 35.7
Rhsim03G0207500 Rhododendron simsii HOM05D000104 ORTHO05D004363 1.4e-53 214.9 347 41.2
SMO223G0022 Selaginella moellendorffii HOM05D000104 ORTHO05D004363 6.1e-46 189.5 304 43.1
Oeu026040.2 Olea europaea HOM05D000104 ORTHO05D004363 4.4e-36 156.8 233 43.3
CBR_g57043 Chara braunii HOM05D000104 ORTHO05D004363 1.9e-31 141.4 378 30.7
C04p38170 Brassica napus HOM05D000104 ORTHO05D004363 1.7e-27 128.3 152 46.1
SGA_v2.0_scaffold447G51747 Striga asiatica HOM05D000104 ORTHO05D004363 3.5e-25 120.6 92 65.2
Hma1.2p1_0268F.1_g107670 Hydrangea macrophylla HOM05D000104 ORTHO05D004363 1.0e-24 119.0 106 61.3
Cre16.g687301 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D004363 5.1e-24 116.7 333 30.9
Nitab4.5_0002482g0010 Nicotiana tabacum HOM05D000104 ORTHO05D004363 4.3e-23 113.6 103 60.2
CAN.G195.25 Capsicum annuum HOM05D000104 ORTHO05D004363 8.1e-22 109.4 97 58.8
Haze_20467 Corylus avellana HOM05D000104 ORTHO05D004363 8.1e-22 109.4 93 59.1
Nitab4.5_0023622g0010 Nicotiana tabacum HOM05D000104 ORTHO05D004363 1.4e-21 108.6 190 38.9
Hma1.2p1_0268F.1_g107680 Hydrangea macrophylla HOM05D000104 ORTHO05D004363 2.6e-20 104.4 100 53.0
QL10p058190 Quercus lobata HOM05D000104 ORTHO05D004363 7.3e-15 86.3 76 55.3
Nitab4.5_0001131g0020 Nicotiana tabacum HOM05D000104 ORTHO05D004363 8.1e-14 82.8 74 56.8
ATR0559G076 Amborella trichopoda HOM05D000104 ORTHO05D004363 1.8e-13 81.6 59 59.3
Dinv09442 Davidia involucrata HOM05D000104 ORTHO05D004363 8.4e-11 72.8 147 38.8
MCO02G056 Micromonas commoda HOM05D000104 ORTHO05D004363 1.4e-10 72.0 308 26.3
EL10Ac6g14346 Beta vulgaris HOM05D000104 ORTHO05D004363 4.2e-10 70.5 50 70.0
PRCOL_00001942 Prasinoderma coloniale HOM05D000104 ORTHO05D004363 1.7e-08 65.1 256 28.1


User provided reference genes

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