Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15535 Utricularia gibba HOM05D003979 ORTHO05D005530 2.2e-79 298.9 149 100.0
HPP92_025734 Vanilla planifolia HOM05D003979 ORTHO05D005530 1.1e-17 94.0 82 62.2
Ca_00636_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 9.0e-17 90.9 84 63.1
Ca_29705_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 9.0e-17 90.9 84 63.1
Psat1g182280 Pisum sativum HOM05D003979 ORTHO05D005530 2.9e-15 85.9 83 60.2
MSTRG.24631 Avicennia marina HOM05D003979 ORTHO05D005530 1.1e-14 84.0 91 56.0
Hma1.2p1_0691F.1_g204250 Hydrangea macrophylla HOM05D003979 ORTHO05D005530 1.1e-14 84.0 96 58.3
Dinv38268 Davidia involucrata HOM05D003979 ORTHO05D005530 1.4e-14 83.6 96 58.3
CSS0027237 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 3.2e-14 82.4 94 55.3
TPR.G30661 Trifolium pratense HOM05D003979 ORTHO05D005530 3.2e-14 82.4 81 59.3
CARHR100330 Cardamine hirsuta HOM05D003979 ORTHO05D005530 4.2e-14 82.0 82 59.8
Glyma.13G207900 Glycine max HOM05D003979 ORTHO05D005530 4.2e-14 82.0 77 61.0
CSS0040719 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 5.4e-14 81.6 94 55.3
Gorai.005G035200 Gossypium raimondii HOM05D003979 ORTHO05D005530 1.2e-13 80.5 58 74.1
COL.COLO4_20310 Corchorus olitorius HOM05D003979 ORTHO05D005530 1.6e-13 80.1 92 51.1
Gohir.D10G144500 Gossypium hirsutum HOM05D003979 ORTHO05D005530 2.1e-13 79.7 61 65.6
Gorai.011G161400 Gossypium raimondii HOM05D003979 ORTHO05D005530 2.1e-13 79.7 61 65.6
Duzib212G0229 Durio zibethinus HOM05D003979 ORTHO05D005530 2.7e-13 79.3 57 68.4
Gohir.D02G031700 Gossypium hirsutum HOM05D003979 ORTHO05D005530 2.7e-13 79.3 86 57.0
Sc25g0005860 Simmondsia chinensis HOM05D003979 ORTHO05D005530 4.6e-13 78.6 79 59.5
Ah.04g166150 Amaranthus hybridus HOM05D003979 ORTHO05D005530 7.9e-13 77.8 58 72.4
Gohir.A02G024400 Gossypium hirsutum HOM05D003979 ORTHO05D005530 7.9e-13 77.8 87 57.5
Lj6g0025731 Lotus japonicus HOM05D003979 ORTHO05D005530 7.9e-13 77.8 83 56.6
MELO3C006331.2 Cucumis melo HOM05D003979 ORTHO05D005530 1.0e-12 77.4 83 59.0
Duzib268G0146 Durio zibethinus HOM05D003979 ORTHO05D005530 1.0e-12 77.4 57 66.7
Duzib151G0303 Durio zibethinus HOM05D003979 ORTHO05D005530 1.3e-12 77.0 44 81.8
Actinidia34623 Actinidia chinensis HOM05D003979 ORTHO05D005530 1.8e-12 76.6 99 49.5
CiPaw.01G125500 Carya illinoinensis HOM05D003979 ORTHO05D005530 1.8e-12 76.6 67 58.2
Cc03_g07310 Coffea canephora HOM05D003979 ORTHO05D005530 1.8e-12 76.6 95 49.5
Lalb_Chr18g0056121 Lupinus albus HOM05D003979 ORTHO05D005530 1.8e-12 76.6 41 87.8
VMungo0540G1831 Vigna mungo HOM05D003979 ORTHO05D005530 1.8e-12 76.6 84 58.3
C01p39410 Brassica napus HOM05D003979 ORTHO05D005530 2.3e-12 76.3 85 56.5
BolC1t03890H Brassica oleracea HOM05D003979 ORTHO05D005530 2.3e-12 76.3 85 56.5
HanXRQChr14g0435331 Helianthus annuus HOM05D003979 ORTHO05D005530 2.3e-12 76.3 77 59.7
HanXRQChr14g0435341 Helianthus annuus HOM05D003979 ORTHO05D005530 2.3e-12 76.3 77 59.7
Peaxi162Scf00073g02029 Petunia axillaris HOM05D003979 ORTHO05D005530 2.3e-12 76.3 85 52.9
Sed0009934 Sechium edule HOM05D003979 ORTHO05D005530 2.3e-12 76.3 98 56.1
THA.LOC104808724 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 2.3e-12 76.3 94 52.1
TAR365G0531 Trochodendron aralioides HOM05D003979 ORTHO05D005530 2.3e-12 76.3 54 72.2
AUR62010687 Chenopodium quinoa HOM05D003979 ORTHO05D005530 3.0e-12 75.9 38 92.1
AUR62017196 Chenopodium quinoa HOM05D003979 ORTHO05D005530 3.0e-12 75.9 38 92.1
Lj6C614G9 Lonicera japonica HOM05D003979 ORTHO05D005530 3.0e-12 75.9 71 56.3
Oeu022336.1 Olea europaea HOM05D003979 ORTHO05D005530 3.0e-12 75.9 40 90.0
BraA01t03222Z Brassica rapa HOM05D003979 ORTHO05D005530 3.9e-12 75.5 86 52.3
Cpa.g.sc59.101 Carica papaya HOM05D003979 ORTHO05D005530 3.9e-12 75.5 92 51.1
AUR62015873 Chenopodium quinoa HOM05D003979 ORTHO05D005530 3.9e-12 75.5 38 92.1
Medtr2g089340 Medicago truncatula HOM05D003979 ORTHO05D005530 3.9e-12 75.5 84 57.1
PGR031G0232 Punica granatum HOM05D003979 ORTHO05D005530 3.9e-12 75.5 90 53.3
AagrBONN_evm.TU.Sc2ySwM_228.3337 Anthoceros agrestis HOM05D003979 ORTHO05D005530 5.1e-12 75.1 58 65.5
Ciclev10004565m.g Citrus clementina HOM05D003979 ORTHO05D005530 5.1e-12 75.1 92 45.7
THA.LOC104804817 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 5.1e-12 75.1 86 53.5
CsaV3_3G011200 Cucumis sativus L. HOM05D003979 ORTHO05D005530 6.7e-12 74.7 82 56.1
MBI07_g21060_MAGBIO Magnolia biondii HOM05D003979 ORTHO05D005530 6.7e-12 74.7 61 63.9
PSO017G0981 Papaver somniferum HOM05D003979 ORTHO05D005530 6.7e-12 74.7 69 59.4
Prupe.1G003100 Prunus persica HOM05D003979 ORTHO05D005530 6.7e-12 74.7 96 50.0
arahy.Tifrunner.gnm1.ann1.NX1XST Arachis hypogaea HOM05D003979 ORTHO05D005530 8.7e-12 74.3 89 56.2
arahy.Tifrunner.gnm1.ann1.ZGF32Z Arachis hypogaea HOM05D003979 ORTHO05D005530 8.7e-12 74.3 89 56.2
Aqoxy2G03779 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 1.1e-11 73.9 53 69.8
AL3G39610 Arabidopsis lyrata HOM05D003979 ORTHO05D005530 1.1e-11 73.9 90 52.2
Phvul.006G152700 Phaseolus vulgaris HOM05D003979 ORTHO05D005530 1.1e-11 73.9 85 55.3
Pp3c11_18700 Physcomitrium patens HOM05D003979 ORTHO05D005530 1.1e-11 73.9 71 59.2
vmacro00506 Vaccinium macrocarpon HOM05D003979 ORTHO05D005530 1.1e-11 73.9 38 86.8
Actinidia35951 Actinidia chinensis HOM05D003979 ORTHO05D005530 1.5e-11 73.6 75 57.3
ClCG05G003530 Citrullus lanatus HOM05D003979 ORTHO05D005530 1.5e-11 73.6 68 60.3
HanXRQChr02g0059571 Helianthus annuus HOM05D003979 ORTHO05D005530 1.5e-11 73.6 41 82.9
Aqoxy5G02610 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 1.9e-11 73.2 53 69.8
AT3G23940 Arabidopsis thaliana HOM05D003979 ORTHO05D005530 1.9e-11 73.2 90 51.1
BcaB04g20393 Brassica carinata HOM05D003979 ORTHO05D005530 1.9e-11 73.2 87 55.2
MD04G1003600 Malus domestica HOM05D003979 ORTHO05D005530 1.9e-11 73.2 95 50.5
RhsimUnG0135800 Rhododendron simsii HOM05D003979 ORTHO05D005530 1.9e-11 73.2 75 58.7
RhsimUnG0180900 Rhododendron simsii HOM05D003979 ORTHO05D005530 1.9e-11 73.2 75 58.7
SMO361G0245 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 1.9e-11 73.2 71 62.0
AUR62020350 Chenopodium quinoa HOM05D003979 ORTHO05D005530 2.5e-11 72.8 70 61.4
FAN10G0585 Fragaria x ananassa HOM05D003979 ORTHO05D005530 2.5e-11 72.8 87 54.0
Sp3g22010 Schrenkiella parvula HOM05D003979 ORTHO05D005530 2.5e-11 72.8 93 50.5
Hund11465 Selenicereus undatus HOM05D003979 ORTHO05D005530 2.5e-11 72.8 61 67.2
TAR624G0299 Trochodendron aralioides HOM05D003979 ORTHO05D005530 2.5e-11 72.8 103 45.6
A01p30940 Brassica napus HOM05D003979 ORTHO05D005530 3.3e-11 72.4 88 51.1
DCAR_031519 Daucus carota HOM05D003979 ORTHO05D005530 3.3e-11 72.4 85 54.1
Migut.N00344 Erythranthe guttata HOM05D003979 ORTHO05D005530 3.3e-11 72.4 90 53.3
Nitab4.5_0001066g0080 Nicotiana tabacum HOM05D003979 ORTHO05D005530 3.3e-11 72.4 38 84.2
Nitab4.5_0001769g0010 Nicotiana tabacum HOM05D003979 ORTHO05D005530 3.3e-11 72.4 38 84.2
Os08g0559600 Oryza sativa ssp. japonica HOM05D003979 ORTHO05D005530 3.3e-11 72.4 85 51.8
A07p08130 Brassica napus HOM05D003979 ORTHO05D005530 4.3e-11 72.0 90 53.3
BraA07t28596Z Brassica rapa HOM05D003979 ORTHO05D005530 4.3e-11 72.0 90 53.3
ECA233G3228 Erigeron canadensis HOM05D003979 ORTHO05D005530 4.3e-11 72.0 86 52.3
Thecc.04G210300 Theobroma cacao HOM05D003979 ORTHO05D005530 4.3e-11 72.0 92 48.9
ATR0787G169 Amborella trichopoda HOM05D003979 ORTHO05D005530 5.6e-11 71.6 78 56.4
BcaB06g26604 Brassica carinata HOM05D003979 ORTHO05D005530 5.6e-11 71.6 91 52.7
Potri.003G176600 Populus trichocarpa HOM05D003979 ORTHO05D005530 5.6e-11 71.6 84 52.4
CANSAT78G1204 Cannabis sativa HOM05D003979 ORTHO05D005530 7.4e-11 71.2 80 55.0
Carub.0003s2458 Capsella rubella HOM05D003979 ORTHO05D005530 7.4e-11 71.2 91 52.7
PGSC0003DMG400019163 Solanum tuberosum HOM05D003979 ORTHO05D005530 7.4e-11 71.2 84 52.4
Thhalv10002451m.g Eutrema salsugineum HOM05D003979 ORTHO05D005530 9.6e-11 70.9 84 51.2
Sopen05g032060 Solanum pennellii HOM05D003979 ORTHO05D005530 9.6e-11 70.9 95 50.5
Solyc12g043020.2 Solanum lycopersicum HOM05D003979 ORTHO05D005530 1.3e-10 70.5 84 48.8
TWI36G0080 Tripterygium wilfordii HOM05D003979 ORTHO05D005530 1.3e-10 70.5 39 79.5
Zm00001eb039310 Zea mays HOM05D003979 ORTHO05D005530 1.3e-10 70.5 83 51.8
Nn1g03146 Nelumbo nucifera HOM05D003979 ORTHO05D005530 1.6e-10 70.1 108 46.3
Solyc05g053540.3 Solanum lycopersicum HOM05D003979 ORTHO05D005530 1.6e-10 70.1 95 50.5
Aa31LG8G10930 Aethionema arabicum HOM05D003979 ORTHO05D005530 2.1e-10 69.7 94 47.9
Hund24848 Selenicereus undatus HOM05D003979 ORTHO05D005530 2.1e-10 69.7 94 47.9
Zm00001eb175970 Zea mays HOM05D003979 ORTHO05D005530 2.1e-10 69.7 77 50.6
CDE04G0146 Ceratophyllum demersum HOM05D003979 ORTHO05D005530 2.8e-10 69.3 37 83.8
BcaC06g35668 Brassica carinata HOM05D003979 ORTHO05D005530 3.7e-10 68.9 90 52.2
C07p12270 Brassica napus HOM05D003979 ORTHO05D005530 3.7e-10 68.9 90 52.2
BolC7t41694H Brassica oleracea HOM05D003979 ORTHO05D005530 3.7e-10 68.9 90 52.2
CiPaw.02G067900 Carya illinoinensis HOM05D003979 ORTHO05D005530 3.7e-10 68.9 96 50.0
Cc02_g25590 Coffea canephora HOM05D003979 ORTHO05D005530 3.7e-10 68.9 93 48.4
QL06p023475 Quercus lobata HOM05D003979 ORTHO05D005530 3.7e-10 68.9 58 58.6
Manes.15G050825 Manihot esculenta HOM05D003979 ORTHO05D005530 4.8e-10 68.6 93 46.2
Sopen12g022260 Solanum pennellii HOM05D003979 ORTHO05D005530 4.8e-10 68.6 79 50.6
FvH4_7g04190 Fragaria vesca HOM05D003979 ORTHO05D005530 6.2e-10 68.2 58 65.5
Peaxi162Scf00536g00915 Petunia axillaris HOM05D003979 ORTHO05D005530 6.2e-10 68.2 94 44.7
CAN.G12.22 Capsicum annuum HOM05D003979 ORTHO05D005530 8.1e-10 67.8 93 51.6
CAN.G765.2 Capsicum annuum HOM05D003979 ORTHO05D005530 8.1e-10 67.8 82 48.8
FAN06G4745 Fragaria x ananassa HOM05D003979 ORTHO05D005530 8.1e-10 67.8 48 70.8
QL07p012436 Quercus lobata HOM05D003979 ORTHO05D005530 8.1e-10 67.8 39 79.5
RcHm_v2.0_Chr1g0328531 Rosa chinensis HOM05D003979 ORTHO05D005530 8.1e-10 67.8 86 48.8
Lsat_1_v5_gn_6_63381 Lactuca sativa HOM05D003979 ORTHO05D005530 1.1e-09 67.4 105 44.8
Mapoly0044s0128 Marchantia polymorpha HOM05D003979 ORTHO05D005530 1.1e-09 67.4 69 56.5
Sabra01G0036200 Salix brachista HOM05D003979 ORTHO05D005530 1.1e-09 67.4 90 48.9
QL07p012465 Quercus lobata HOM05D003979 ORTHO05D005530 1.8e-09 66.6 81 51.9
PSO063G3024 Papaver somniferum HOM05D003979 ORTHO05D005530 2.4e-09 66.2 92 45.7
SMO361G0819 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 2.4e-09 66.2 37 81.1
FAN01G2046 Fragaria x ananassa HOM05D003979 ORTHO05D005530 3.1e-09 65.9 85 51.8
Potri.001G051700 Populus trichocarpa HOM05D003979 ORTHO05D005530 3.1e-09 65.9 82 51.2
EL10Ac4g07703 Beta vulgaris HOM05D003979 ORTHO05D005530 4.0e-09 65.5 96 46.9
TWI09G0393 Tripterygium wilfordii HOM05D003979 ORTHO05D005530 4.0e-09 65.5 99 44.4
Haze_11573 Corylus avellana HOM05D003979 ORTHO05D005530 1.2e-08 63.9 102 41.2
Cfa014896 Carpinus fangiana HOM05D003979 ORTHO05D005530 2.0e-08 63.2 97 47.4
CBR_g16971 Chara braunii HOM05D003979 ORTHO05D005530 2.0e-08 63.2 119 38.7
MCO11G076 Micromonas commoda HOM05D003979 ORTHO05D005530 4.9e-07 58.5 37 70.3
Cre03.g206600 Chlamydomonas reinhardtii HOM05D003979 ORTHO05D005530 8.4e-07 57.8 68 48.5
PRCOL_00005867 Prasinoderma coloniale HOM05D003979 ORTHO05D005530 9.3e-06 54.3 42 57.1


User provided reference genes

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