Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14972 Utricularia gibba HOM05D005480 ORTHO05D006735 3.8e-250 867.8 485 100.0
Lj7A20T61 Lonicera japonica HOM05D005480 ORTHO05D006735 2.2e-120 436.8 406 63.1
MSTRG.23794 Avicennia marina HOM05D005480 ORTHO05D006735 1.4e-119 434.1 464 61.9
Lj7A18T44 Lonicera japonica HOM05D005480 ORTHO05D006735 2.7e-118 429.9 406 62.1
SGA_v2.0_scaffold15G07231 Striga asiatica HOM05D005480 ORTHO05D006735 2.2e-117 426.8 419 64.4
PGSC0003DMG400010074 Solanum tuberosum HOM05D005480 ORTHO05D006735 1.4e-114 417.5 455 57.4
Dinv39906 Davidia involucrata HOM05D005480 ORTHO05D006735 3.0e-114 416.4 445 59.8
Dinv26753 Davidia involucrata HOM05D005480 ORTHO05D006735 4.0e-114 416.0 437 59.3
Migut.H00485 Erythranthe guttata HOM05D005480 ORTHO05D006735 6.8e-114 415.2 423 61.0
Sopen02g034920 Solanum pennellii HOM05D005480 ORTHO05D006735 2.0e-113 413.7 454 57.0
MELO3C007529.2 Cucumis melo HOM05D005480 ORTHO05D006735 7.5e-113 411.8 406 59.6
CsaV3_6G042900 Cucumis sativus L. HOM05D005480 ORTHO05D006735 2.2e-112 410.2 403 58.3
Solyc02g090230.4 Solanum lycopersicum HOM05D005480 ORTHO05D006735 2.8e-112 409.8 457 56.0
Glyma.01G181500 Glycine max HOM05D005480 ORTHO05D006735 8.3e-112 408.3 400 59.2
TPR.G11349 Trifolium pratense HOM05D005480 ORTHO05D006735 8.3e-112 408.3 476 57.4
Eucgr.H01972 Eucalyptus grandis HOM05D005480 ORTHO05D006735 2.4e-111 406.8 367 60.8
Rhsim02G0168000 Rhododendron simsii HOM05D005480 ORTHO05D006735 1.2e-110 404.4 363 61.7
CSS0014684 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 1.6e-110 404.1 557 50.4
Ciclev10025487m.g Citrus clementina HOM05D005480 ORTHO05D006735 2.0e-110 403.7 383 59.3
Thecc.01G048100 Theobroma cacao HOM05D005480 ORTHO05D006735 4.5e-110 402.5 464 57.3
HanXRQChr04g0123741 Helianthus annuus HOM05D005480 ORTHO05D006735 1.7e-109 400.6 419 61.1
Cc07_g05560 Coffea canephora HOM05D005480 ORTHO05D006735 2.3e-109 400.2 457 55.6
Sed0026694 Sechium edule HOM05D005480 ORTHO05D006735 2.3e-109 400.2 402 56.5
DCAR_021432 Daucus carota HOM05D005480 ORTHO05D006735 2.9e-109 399.8 454 59.7
CiPaw.01G026500 Carya illinoinensis HOM05D005480 ORTHO05D006735 3.8e-109 399.4 399 59.4
Glyma.11G059700 Glycine max HOM05D005480 ORTHO05D006735 3.8e-109 399.4 373 61.7
Phvul.002G022500 Phaseolus vulgaris HOM05D005480 ORTHO05D006735 5.0e-109 399.1 428 60.5
Duzib187G0998 Durio zibethinus HOM05D005480 ORTHO05D006735 6.5e-109 398.7 400 58.0
MD02G1161300 Malus domestica HOM05D005480 ORTHO05D006735 1.5e-108 397.5 460 51.7
Actinidia12077 Actinidia chinensis HOM05D005480 ORTHO05D006735 5.5e-108 395.6 527 54.3
QL06p043724 Quercus lobata HOM05D005480 ORTHO05D006735 1.6e-107 394.0 413 56.2
Medtr5g018390 Medicago truncatula HOM05D005480 ORTHO05D006735 2.8e-107 393.3 416 58.7
Prupe.7G142300 Prunus persica HOM05D005480 ORTHO05D006735 8.0e-107 391.7 411 55.5
VMungo1215G2543 Vigna mungo HOM05D005480 ORTHO05D006735 8.0e-107 391.7 383 59.3
CSS0005424 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 1.0e-106 391.3 554 50.0
Gohir.D12G090600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 3.0e-106 389.8 452 56.2
Manes.13G130100 Manihot esculenta HOM05D005480 ORTHO05D006735 5.2e-106 389.0 422 59.2
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 6.8e-106 388.7 406 55.9
arahy.Tifrunner.gnm1.ann1.E9URZA Arachis hypogaea HOM05D005480 ORTHO05D006735 6.8e-106 388.7 426 58.9
Lj2g0021055 Lotus japonicus HOM05D005480 ORTHO05D006735 6.8e-106 388.7 364 60.7
Sc03g0001260 Simmondsia chinensis HOM05D005480 ORTHO05D006735 1.2e-105 387.9 370 59.5
Gorai.008G072400 Gossypium raimondii HOM05D005480 ORTHO05D006735 1.5e-105 387.5 452 58.4
TAR625G1062 Trochodendron aralioides HOM05D005480 ORTHO05D006735 1.5e-105 387.5 456 52.9
Nn6g32121 Nelumbo nucifera HOM05D005480 ORTHO05D006735 4.4e-105 386.0 362 58.3
ECA232G3160 Erigeron canadensis HOM05D005480 ORTHO05D006735 7.5e-105 385.2 470 56.8
PGR102G0042 Punica granatum HOM05D005480 ORTHO05D006735 7.5e-105 385.2 414 58.2
Gohir.A12G068600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 9.8e-105 384.8 398 58.5
Psat2g164160 Pisum sativum HOM05D005480 ORTHO05D006735 1.7e-104 384.0 377 61.0
THA.LOC104819823 Tarenaya hassleriana HOM05D005480 ORTHO05D006735 2.8e-104 383.3 374 57.5
MD15G1275400 Malus domestica HOM05D005480 ORTHO05D006735 6.3e-104 382.1 414 57.5
ClCG01G016580 Citrullus lanatus HOM05D005480 ORTHO05D006735 8.3e-104 381.7 455 52.3
TAR381G0420 Trochodendron aralioides HOM05D005480 ORTHO05D006735 1.1e-103 381.3 404 54.2
Lalb_Chr09g0322931 Lupinus albus HOM05D005480 ORTHO05D006735 1.8e-103 380.6 373 59.2
Duzib147G0741 Durio zibethinus HOM05D005480 ORTHO05D006735 5.4e-103 379.0 397 57.4
Potri.007G036600 Populus trichocarpa HOM05D005480 ORTHO05D006735 7.0e-103 378.6 413 55.0
FAN19G1500 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.2e-102 377.9 341 58.1
Hma1.2p1_0546F.1_g176180 Hydrangea macrophylla HOM05D005480 ORTHO05D006735 3.5e-102 376.3 478 54.2
FvH4_1g14810 Fragaria vesca HOM05D005480 ORTHO05D006735 4.5e-102 375.9 340 57.9
CANSAT01G1679 Cannabis sativa HOM05D005480 ORTHO05D006735 5.9e-102 375.6 400 57.0
Aqoxy5G01417 Aquilegia oxysepala HOM05D005480 ORTHO05D006735 1.0e-101 374.8 366 57.7
Hund13586 Selenicereus undatus HOM05D005480 ORTHO05D006735 1.3e-101 374.4 380 55.8
RcHm_v2.0_Chr2g0103771 Rosa chinensis HOM05D005480 ORTHO05D006735 1.7e-101 374.0 365 57.5
PSO170G5089 Papaver somniferum HOM05D005480 ORTHO05D006735 2.3e-101 373.6 419 56.6
FAN23G2977 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.5e-100 370.9 417 53.0
FAN28G0426 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.9e-100 370.5 383 58.2
PSO210G7251 Papaver somniferum HOM05D005480 ORTHO05D006735 1.9e-100 370.5 417 56.8
FAN26G2127 Fragaria x ananassa HOM05D005480 ORTHO05D006735 4.3e-100 369.4 383 56.4
Lsat_1_v5_gn_4_179460 Lactuca sativa HOM05D005480 ORTHO05D006735 2.1e-99 367.1 429 55.9
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 6.8e-98 362.1 309 63.4
Cfa004218 Carpinus fangiana HOM05D005480 ORTHO05D006735 9.8e-97 358.2 373 59.0
Oeu003952.2 Olea europaea HOM05D005480 ORTHO05D006735 2.4e-95 353.6 633 42.5
Peaxi162Scf00993g00022 Petunia axillaris HOM05D005480 ORTHO05D006735 7.0e-95 352.1 423 55.3
ATR0733G143 Amborella trichopoda HOM05D005480 ORTHO05D006735 9.2e-95 351.7 463 49.7
Carub.0007s0332 Capsella rubella HOM05D005480 ORTHO05D006735 1.3e-93 347.8 374 54.3
Thhalv10025060m.g Eutrema salsugineum HOM05D005480 ORTHO05D006735 1.3e-93 347.8 420 55.5
COL.COLO4_11327 Corchorus olitorius HOM05D005480 ORTHO05D006735 5.0e-93 345.9 367 56.1
CAN.G836.34 Capsicum annuum HOM05D005480 ORTHO05D006735 6.6e-93 345.5 319 61.1
vmacro05295 Vaccinium macrocarpon HOM05D005480 ORTHO05D006735 5.6e-92 342.4 333 59.5
Aa31LG6G13860 Aethionema arabicum HOM05D005480 ORTHO05D006735 9.5e-92 341.7 366 54.9
Sp7g34650 Schrenkiella parvula HOM05D005480 ORTHO05D006735 2.1e-91 340.5 413 51.6
CDE02G2721 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 2.8e-91 340.1 318 58.2
CDE01G0732 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 3.6e-91 339.7 414 53.6
Nitab4.5_0001014g0070 Nicotiana tabacum HOM05D005480 ORTHO05D006735 3.6e-91 339.7 307 60.9
Nitab4.5_0000108g0300 Nicotiana tabacum HOM05D005480 ORTHO05D006735 4.7e-91 339.3 307 61.2
AL7G13910 Arabidopsis lyrata HOM05D005480 ORTHO05D006735 2.3e-90 337.0 366 52.7
AT4G37130 Arabidopsis thaliana HOM05D005480 ORTHO05D006735 6.8e-90 335.5 365 52.9
BraA01t00184Z Brassica rapa HOM05D005480 ORTHO05D006735 1.2e-89 334.7 453 49.9
A01p01950 Brassica napus HOM05D005480 ORTHO05D006735 4.4e-89 332.8 453 50.1
CARHR245380 Cardamine hirsuta HOM05D005480 ORTHO05D006735 1.7e-88 330.9 366 52.7
MBI16_g19897_MAGBIO Magnolia biondii HOM05D005480 ORTHO05D006735 4.9e-88 329.3 373 53.6
AUR62003828 Chenopodium quinoa HOM05D005480 ORTHO05D006735 6.0e-86 322.4 332 56.0
BolC1t00204H Brassica oleracea HOM05D005480 ORTHO05D006735 1.0e-85 321.6 364 52.2
C01p02120 Brassica napus HOM05D005480 ORTHO05D006735 1.3e-85 321.2 364 52.2
BcaNung03510 Brassica carinata HOM05D005480 ORTHO05D006735 1.9e-84 317.4 409 50.6
A08p22500 Brassica napus HOM05D005480 ORTHO05D006735 4.7e-83 312.8 458 47.2
BolC3t20222H Brassica oleracea HOM05D005480 ORTHO05D006735 4.7e-83 312.8 423 49.6
BraA08t34205Z Brassica rapa HOM05D005480 ORTHO05D006735 4.7e-83 312.8 457 47.3
Sabra07G0032600 Salix brachista HOM05D005480 ORTHO05D006735 1.1e-82 311.6 370 52.7
SHI08751 Sapria himalayana HOM05D005480 ORTHO05D006735 3.1e-82 310.1 473 45.2
Haze_15193 Corylus avellana HOM05D005480 ORTHO05D006735 4.0e-82 309.7 312 62.8
Zm00001eb314700 Zea mays HOM05D005480 ORTHO05D006735 6.8e-82 308.9 326 51.5
BcaB03g12366 Brassica carinata HOM05D005480 ORTHO05D006735 4.4e-81 306.2 506 44.3
Zm00001eb100530 Zea mays HOM05D005480 ORTHO05D006735 4.1e-79 299.7 325 49.8
GSVIVG01005079001 Vitis vinifera HOM05D005480 ORTHO05D006735 7.1e-79 298.9 270 58.9
Os09g0453500 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 1.2e-78 298.1 423 49.2
BcaC01g00434 Brassica carinata HOM05D005480 ORTHO05D006735 2.3e-77 293.9 427 47.8
C03p79710 Brassica napus HOM05D005480 ORTHO05D006735 2.3e-77 293.9 427 47.8
Ca_24802_v3 Cicer arietinum L. HOM05D005480 ORTHO05D006735 8.6e-77 292.0 297 63.0
AUR62001975 Chenopodium quinoa HOM05D005480 ORTHO05D006735 4.3e-76 289.7 304 58.2
arahy.Tifrunner.gnm1.ann1.HXIH5S Arachis hypogaea HOM05D005480 ORTHO05D006735 1.1e-74 285.0 336 55.1
AagrBONN_evm.TU.Sc2ySwM_117.4106 Anthoceros agrestis HOM05D005480 ORTHO05D006735 3.4e-73 280.0 376 46.5
Lalb_Chr05g0213141 Lupinus albus HOM05D005480 ORTHO05D006735 3.5e-70 270.0 289 54.7
BcaB03g12364 Brassica carinata HOM05D005480 ORTHO05D006735 1.7e-69 267.7 484 41.9
Mapoly0027s0041 Marchantia polymorpha HOM05D005480 ORTHO05D006735 1.2e-62 245.0 410 40.2
Ah.03g144040 Amaranthus hybridus HOM05D005480 ORTHO05D006735 6.6e-61 239.2 230 54.8
Pp3c24_6760 Physcomitrium patens HOM05D005480 ORTHO05D006735 1.6e-59 234.6 373 41.8
SGA_v2.0_scaffold135G34951 Striga asiatica HOM05D005480 ORTHO05D006735 5.4e-55 219.5 422 42.2
SEGI_40098 Sequoiadendron giganteum HOM05D005480 ORTHO05D006735 9.3e-55 218.8 222 56.3
HPP92_016040 Vanilla planifolia HOM05D005480 ORTHO05D006735 7.4e-52 209.1 231 50.6
CBR_g66690 Chara braunii HOM05D005480 ORTHO05D006735 8.7e-45 185.7 405 32.3
Os03g0765400 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 1.1e-44 185.3 388 35.1
Mapoly0016s0112 Marchantia polymorpha HOM05D005480 ORTHO05D006735 1.4e-39 168.3 328 34.8
Psat5g148720 Pisum sativum HOM05D005480 ORTHO05D006735 3.3e-36 157.1 158 58.9
HPP92_016039 Vanilla planifolia HOM05D005480 ORTHO05D006735 1.5e-25 121.7 71 81.7
Cpa.g.c44085 Carica papaya HOM05D005480 ORTHO05D006735 1.1e-20 105.5 142 52.8
Sabra07G0033400 Salix brachista HOM05D005480 ORTHO05D006735 1.7e-19 101.7 134 56.0
Sabra07G0032900 Salix brachista HOM05D005480 ORTHO05D006735 8.2e-19 99.4 148 51.4
Sabra07G0033100 Salix brachista HOM05D005480 ORTHO05D006735 8.2e-19 99.4 148 51.4
Ah.03g144030 Amaranthus hybridus HOM05D005480 ORTHO05D006735 2.7e-14 84.3 83 54.2
BcaC02g10502 Brassica carinata HOM05D005480 ORTHO05D006735 3.1e-10 70.9 44 63.6
C04p28170 Brassica napus HOM05D005480 ORTHO05D006735 3.1e-10 70.9 44 63.6
BolC4t24360H Brassica oleracea HOM05D005480 ORTHO05D006735 3.1e-10 70.9 44 63.6
CBR_g66696 Chara braunii HOM05D005480 ORTHO05D006735 6.5e-08 63.2 210 31.9
Cre16.g685217 Chlamydomonas reinhardtii HOM05D005480 ORTHO05D006735 6.5e-08 63.2 288 22.2
PRCOL_00002206 Prasinoderma coloniale HOM05D005480 ORTHO05D006735 1.1e-07 62.4 266 27.4
C04p33290 Brassica napus HOM05D005480 ORTHO05D006735 9.4e-07 59.3 58 46.6
BolC4t24894H Brassica oleracea HOM05D005480 ORTHO05D006735 6.1e-06 56.6 45 55.6


User provided reference genes

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