Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14831 Utricularia gibba HOM05D002863 ORTHO05D005691 2.5e-68 261.9 126 100.0
unitig_41.g31654 Utricularia gibba HOM05D002863 ORTHO05D005691 1.2e-41 173.3 87 95.4
SGA_v2.0_scaffold191G40493 Striga asiatica HOM05D002863 ORTHO05D005691 2.1e-38 162.5 100 77.0
Migut.G00361 Erythranthe guttata HOM05D002863 ORTHO05D005691 6.0e-38 161.0 98 78.6
Cc03_g04040 Coffea canephora HOM05D002863 ORTHO05D005691 5.1e-37 157.9 99 75.8
Oeu018974.1 Olea europaea HOM05D002863 ORTHO05D005691 1.6e-35 152.9 98 73.5
SalBow2G0283 Salvia bowleyana HOM05D002863 ORTHO05D005691 5.2e-34 147.9 101 70.3
Nitab4.5_0000321g0190 Nicotiana tabacum HOM05D002863 ORTHO05D005691 2.2e-32 142.5 102 64.7
Nitab4.5_0006783g0030 Nicotiana tabacum HOM05D002863 ORTHO05D005691 2.9e-32 142.1 102 63.7
Peaxi162Scf00131g00027 Petunia axillaris HOM05D002863 ORTHO05D005691 4.9e-32 141.4 101 64.4
Sopen06g019210 Solanum pennellii HOM05D002863 ORTHO05D005691 3.5e-30 135.2 99 63.6
PGSC0003DMG400016265 Solanum tuberosum HOM05D002863 ORTHO05D005691 4.6e-30 134.8 101 63.4
Solyc06g054050.3 Solanum lycopersicum HOM05D002863 ORTHO05D005691 1.0e-29 133.7 98 63.3
CAN.G231.13 Capsicum annuum HOM05D002863 ORTHO05D005691 1.3e-29 133.3 101 63.4
PGSC0003DMG400016310 Solanum tuberosum HOM05D002863 ORTHO05D005691 1.7e-29 132.9 99 63.6
Solyc06g054020.3 Solanum lycopersicum HOM05D002863 ORTHO05D005691 5.1e-29 131.3 99 63.6
Sopen06g019190 Solanum pennellii HOM05D002863 ORTHO05D005691 6.6e-29 131.0 99 63.6
Aqoxy5G00438 Aquilegia oxysepala HOM05D002863 ORTHO05D005691 3.3e-28 128.6 97 66.0
Thecc.04G235200 Theobroma cacao HOM05D002863 ORTHO05D005691 6.8e-26 120.9 97 60.8
AUR62000846 Chenopodium quinoa HOM05D002863 ORTHO05D005691 2.0e-25 119.4 108 56.5
CSS0024605 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 3.4e-25 118.6 97 58.8
CSS0027055 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 3.4e-25 118.6 97 58.8
Duzib151G1175 Durio zibethinus HOM05D002863 ORTHO05D005691 4.4e-25 118.2 97 61.9
Manes.03G175900 Manihot esculenta HOM05D002863 ORTHO05D005691 5.8e-25 117.9 95 62.1
Sed0023639 Sechium edule HOM05D002863 ORTHO05D005691 5.8e-25 117.9 95 62.1
ClCG06G006340 Citrullus lanatus HOM05D002863 ORTHO05D005691 7.6e-25 117.5 101 56.4
Haze_11201 Corylus avellana HOM05D002863 ORTHO05D005691 7.6e-25 117.5 98 60.2
AUR62005129 Chenopodium quinoa HOM05D002863 ORTHO05D005691 9.9e-25 117.1 108 54.6
Nn1g02374 Nelumbo nucifera HOM05D002863 ORTHO05D005691 1.3e-24 116.7 95 58.9
Eucgr.H03436 Eucalyptus grandis HOM05D002863 ORTHO05D005691 2.2e-24 115.9 98 58.2
TAR636G1187 Trochodendron aralioides HOM05D002863 ORTHO05D005691 2.2e-24 115.9 98 58.2
QL06p001686 Quercus lobata HOM05D002863 ORTHO05D005691 3.8e-24 115.2 97 55.7
EL10Ac4g09337 Beta vulgaris HOM05D002863 ORTHO05D005691 4.9e-24 114.8 108 52.8
MELO3C012664.2 Cucumis melo HOM05D002863 ORTHO05D005691 4.9e-24 114.8 101 55.4
Dinv14015 Davidia involucrata HOM05D002863 ORTHO05D005691 6.4e-24 114.4 99 57.6
GSVIVG01018011001 Vitis vinifera HOM05D002863 ORTHO05D005691 6.4e-24 114.4 95 60.0
THA.LOC104800956 Tarenaya hassleriana HOM05D002863 ORTHO05D005691 8.4e-24 114.0 98 58.2
CANSAT78G2191 Cannabis sativa HOM05D002863 ORTHO05D005691 1.1e-23 113.6 102 53.9
CsaV3_7G022380 Cucumis sativus L. HOM05D002863 ORTHO05D005691 1.1e-23 113.6 101 54.5
PSO210G3945 Papaver somniferum HOM05D002863 ORTHO05D005691 1.1e-23 113.6 94 56.4
PSO832G1692 Papaver somniferum HOM05D002863 ORTHO05D005691 1.1e-23 113.6 94 56.4
FAN07G0972 Fragaria x ananassa HOM05D002863 ORTHO05D005691 1.9e-23 112.8 103 57.3
arahy.Tifrunner.gnm1.ann1.IF8NHZ Arachis hypogaea HOM05D002863 ORTHO05D005691 2.4e-23 112.5 97 52.6
Lj3E732T0 Lonicera japonica HOM05D002863 ORTHO05D005691 2.4e-23 112.5 99 57.6
Phvul.002G042600 Phaseolus vulgaris HOM05D002863 ORTHO05D005691 2.4e-23 112.5 102 52.0
RcHm_v2.0_Chr4g0415581 Rosa chinensis HOM05D002863 ORTHO05D005691 2.4e-23 112.5 99 59.6
Dinv17741 Davidia involucrata HOM05D002863 ORTHO05D005691 3.2e-23 112.1 98 54.1
FvH4_4g15972 Fragaria vesca HOM05D002863 ORTHO05D005691 3.2e-23 112.1 103 57.3
FAN12G0500 Fragaria x ananassa HOM05D002863 ORTHO05D005691 3.2e-23 112.1 103 57.3
FAN17G1329 Fragaria x ananassa HOM05D002863 ORTHO05D005691 3.2e-23 112.1 103 57.3
Rhsim04G0200000 Rhododendron simsii HOM05D002863 ORTHO05D005691 4.2e-23 111.7 98 58.2
TWI12G1273 Tripterygium wilfordii HOM05D002863 ORTHO05D005691 4.2e-23 111.7 95 54.7
arahy.Tifrunner.gnm1.ann1.SX262Z Arachis hypogaea HOM05D002863 ORTHO05D005691 7.1e-23 110.9 97 52.6
Cfa008472 Carpinus fangiana HOM05D002863 ORTHO05D005691 7.1e-23 110.9 98 58.2
Psat2g190040 Pisum sativum HOM05D002863 ORTHO05D005691 9.3e-23 110.5 97 53.6
Glyma.01G235200 Glycine max HOM05D002863 ORTHO05D005691 1.2e-22 110.2 102 52.9
TWI53G0907 Tripterygium wilfordii HOM05D002863 ORTHO05D005691 1.2e-22 110.2 99 53.5
Atru.chr4.2430 Acer truncatum HOM05D002863 ORTHO05D005691 1.6e-22 109.8 99 55.6
CSS0031002 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 2.1e-22 109.4 95 53.7
Sc13g0004580 Simmondsia chinensis HOM05D002863 ORTHO05D005691 2.1e-22 109.4 98 54.1
HPP92_006123 Vanilla planifolia HOM05D002863 ORTHO05D005691 2.1e-22 109.4 95 49.5
Thhalv10006684m.g Eutrema salsugineum HOM05D002863 ORTHO05D005691 3.5e-22 108.6 98 56.1
MBI05_g12094_MAGBIO Magnolia biondii HOM05D002863 ORTHO05D005691 3.5e-22 108.6 97 50.5
Prupe.1G017300 Prunus persica HOM05D002863 ORTHO05D005691 6.0e-22 107.8 103 56.3
Carub.0001s0479 Capsella rubella HOM05D002863 ORTHO05D005691 7.8e-22 107.5 100 55.0
Lalb_Chr16g0376481 Lupinus albus HOM05D002863 ORTHO05D005691 7.8e-22 107.5 100 56.0
CiPaw.01G198300 Carya illinoinensis HOM05D002863 ORTHO05D005691 1.0e-21 107.1 100 55.0
AL1G15300 Arabidopsis lyrata HOM05D002863 ORTHO05D005691 1.7e-21 106.3 100 54.0
Ciclev10004283m.g Citrus clementina HOM05D002863 ORTHO05D005691 2.3e-21 105.9 98 54.1
Aa31LG1G19180 Aethionema arabicum HOM05D002863 ORTHO05D005691 3.0e-21 105.5 98 53.1
Potri.005G047500 Populus trichocarpa HOM05D002863 ORTHO05D005691 3.0e-21 105.5 98 53.1
Hund10646 Selenicereus undatus HOM05D002863 ORTHO05D005691 3.9e-21 105.1 100 49.0
TPR.G38022 Trifolium pratense HOM05D002863 ORTHO05D005691 3.9e-21 105.1 97 52.6
COL.COLO4_21516 Corchorus olitorius HOM05D002863 ORTHO05D005691 5.1e-21 104.8 99 53.5
Medtr5g006890 Medicago truncatula HOM05D002863 ORTHO05D005691 6.6e-21 104.4 97 51.5
AT1G05460 Arabidopsis thaliana HOM05D002863 ORTHO05D005691 8.7e-21 104.0 100 54.0
Potri.008G155400 Populus trichocarpa HOM05D002863 ORTHO05D005691 8.7e-21 104.0 98 54.1
Medtr2g049990 Medicago truncatula HOM05D002863 ORTHO05D005691 1.1e-20 103.6 97 51.5
Gohir.A09G217400 Gossypium hirsutum HOM05D002863 ORTHO05D005691 1.5e-20 103.2 98 54.1
LjContig00222g0014636 Lotus japonicus HOM05D002863 ORTHO05D005691 1.5e-20 103.2 97 55.7
CSS0037612 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 1.9e-20 102.8 98 49.0
Gohir.D09G219800 Gossypium hirsutum HOM05D002863 ORTHO05D005691 1.9e-20 102.8 98 54.1
MD13G1196500 Malus domestica HOM05D002863 ORTHO05D005691 1.9e-20 102.8 101 53.5
Ca_24420_v3 Cicer arietinum L. HOM05D002863 ORTHO05D005691 2.5e-20 102.4 98 52.0
CSS0000686 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 3.3e-20 102.1 98 49.0
PGR004G1808 Punica granatum HOM05D002863 ORTHO05D005691 3.3e-20 102.1 95 50.5
VMungo0251G0587 Vigna mungo HOM05D002863 ORTHO05D005691 3.3e-20 102.1 108 49.1
PGR004G0456 Punica granatum HOM05D002863 ORTHO05D005691 4.3e-20 101.7 98 46.9
CSS0007282 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 7.3e-20 100.9 98 49.0
VMungo1215G2311 Vigna mungo HOM05D002863 ORTHO05D005691 7.3e-20 100.9 108 49.1
Sp1g04340 Schrenkiella parvula HOM05D002863 ORTHO05D005691 9.6e-20 100.5 100 53.0
BcaB02g06857 Brassica carinata HOM05D002863 ORTHO05D005691 1.6e-19 99.8 102 53.9
CARHR004950 Cardamine hirsuta HOM05D002863 ORTHO05D005691 1.6e-19 99.8 100 52.0
DCAR_002375 Daucus carota HOM05D002863 ORTHO05D005691 1.6e-19 99.8 102 50.0
Cpa.g.sc117.40 Carica papaya HOM05D002863 ORTHO05D005691 2.8e-19 99.0 98 46.9
Gorai.006G240800 Gossypium raimondii HOM05D002863 ORTHO05D005691 3.6e-19 98.6 98 53.1
COL.COLO4_13640 Corchorus olitorius HOM05D002863 ORTHO05D005691 4.8e-19 98.2 95 52.6
ECA236G4457 Erigeron canadensis HOM05D002863 ORTHO05D005691 4.8e-19 98.2 105 50.5
Duzib177G0218 Durio zibethinus HOM05D002863 ORTHO05D005691 8.1e-19 97.4 98 53.1
Os03g0160400 Oryza sativa ssp. japonica HOM05D002863 ORTHO05D005691 1.1e-18 97.1 96 49.0
Gohir.D11G266600 Gossypium hirsutum HOM05D002863 ORTHO05D005691 3.1e-18 95.5 94 53.2
Gorai.007G286400 Gossypium raimondii HOM05D002863 ORTHO05D005691 3.1e-18 95.5 94 53.2
BcaC05g24383 Brassica carinata HOM05D002863 ORTHO05D005691 4.0e-18 95.1 100 53.0
A10p04180 Brassica napus HOM05D002863 ORTHO05D005691 4.0e-18 95.1 100 53.0
C05p03810 Brassica napus HOM05D002863 ORTHO05D005691 4.0e-18 95.1 100 53.0
BolC5t29158H Brassica oleracea HOM05D002863 ORTHO05D005691 4.0e-18 95.1 100 53.0
BraA10t42687Z Brassica rapa HOM05D002863 ORTHO05D005691 4.0e-18 95.1 100 53.0
Cc02_g31310 Coffea canephora HOM05D002863 ORTHO05D005691 6.9e-18 94.4 95 51.6
VMungo0251G2242 Vigna mungo HOM05D002863 ORTHO05D005691 2.6e-17 92.4 100 48.0
Thecc.05G291200 Theobroma cacao HOM05D002863 ORTHO05D005691 4.4e-17 91.7 98 53.1
Zm00001eb004540 Zea mays HOM05D002863 ORTHO05D005691 7.6e-17 90.9 96 44.8
Gohir.A11G256800 Gossypium hirsutum HOM05D002863 ORTHO05D005691 9.9e-17 90.5 94 51.1
ATR0665G272 Amborella trichopoda HOM05D002863 ORTHO05D005691 2.2e-16 89.4 102 45.1
Nitab4.5_0002361g0230 Nicotiana tabacum HOM05D002863 ORTHO05D005691 2.9e-16 89.0 98 45.9
Zm00001eb403310 Zea mays HOM05D002863 ORTHO05D005691 8.4e-16 87.4 96 43.8
Sed0008697 Sechium edule HOM05D002863 ORTHO05D005691 1.9e-15 86.3 96 46.9
CDE06G1398 Ceratophyllum demersum HOM05D002863 ORTHO05D005691 3.2e-15 85.5 93 44.1
Lsat_1_v5_gn_9_80360 Lactuca sativa HOM05D002863 ORTHO05D005691 5.4e-15 84.7 106 46.2
CDE07G0808 Ceratophyllum demersum HOM05D002863 ORTHO05D005691 7.1e-15 84.3 93 43.0
Eucgr.H04399 Eucalyptus grandis HOM05D002863 ORTHO05D005691 1.4e-10 70.1 79 45.6
HanXRQChr04g0115181 Helianthus annuus HOM05D002863 ORTHO05D005691 1.4e-10 70.1 91 45.1
A08p08300 Brassica napus HOM05D002863 ORTHO05D005691 1.5e-09 66.6 86 44.2
QL04p043726 Quercus lobata HOM05D000176 ORTHO05D007506 1.2e-06 57.0 53 49.1


User provided reference genes

Program Settings