Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14642 Utricularia gibba HOM05D003684 ORTHO05D004428 0.0e+00 1461.8 745 100.0
unitig_736.g22645 Utricularia gibba HOM05D003684 ORTHO05D004428 0.0e+00 1124.0 773 76.3
Migut.M00001 Erythranthe guttata HOM05D003684 ORTHO05D004428 4.8e-244 848.2 821 59.1
Oeu063702.1 Olea europaea HOM05D003684 ORTHO05D004428 6.9e-243 844.3 825 57.8
MSTRG.23231 Avicennia marina HOM05D003684 ORTHO05D004428 7.9e-239 830.9 817 58.5
SGA_v2.0_scaffold12G06270 Striga asiatica HOM05D003684 ORTHO05D004428 4.8e-236 821.6 830 57.2
Duzib213G0690 Durio zibethinus HOM05D003684 ORTHO05D004428 1.0e-209 734.2 808 52.4
Solyc05g056340.3 Solanum lycopersicum HOM05D003684 ORTHO05D004428 8.6e-209 731.1 820 50.9
Thecc.07G170900 Theobroma cacao HOM05D003684 ORTHO05D004428 1.1e-208 730.7 810 53.0
PGR119G1631 Punica granatum HOM05D003684 ORTHO05D004428 2.1e-207 726.5 802 52.9
Sopen05g034730 Solanum pennellii HOM05D003684 ORTHO05D004428 5.2e-206 721.8 818 50.5
RcHm_v2.0_Chr3g0485021 Rosa chinensis HOM05D003684 ORTHO05D004428 1.5e-205 720.3 801 52.3
TAR381G1133 Trochodendron aralioides HOM05D003684 ORTHO05D004428 2.0e-205 719.9 805 51.1
Manes.13G154400 Manihot esculenta HOM05D003684 ORTHO05D004428 7.5e-205 718.0 834 50.5
CsaV3_2G019660 Cucumis sativus L. HOM05D003684 ORTHO05D004428 3.7e-204 715.7 802 52.4
Gorai.002G106900 Gossypium raimondii HOM05D003684 ORTHO05D004428 6.3e-204 714.9 807 52.0
COL.COLO4_36995 Corchorus olitorius HOM05D003684 ORTHO05D004428 1.1e-203 714.1 829 50.9
Potri.004G135800 Populus trichocarpa HOM05D003684 ORTHO05D004428 4.1e-203 712.2 801 52.6
Dinv26831 Davidia involucrata HOM05D003684 ORTHO05D004428 1.0e-201 707.6 793 52.5
Sed0026164 Sechium edule HOM05D003684 ORTHO05D004428 1.0e-201 707.6 804 51.9
FvH4_1g25880 Fragaria vesca HOM05D003684 ORTHO05D004428 3.8e-201 705.7 802 51.2
CAN.G1156.25 Capsicum annuum HOM05D003684 ORTHO05D004428 6.6e-201 704.9 867 48.1
Cfa020930 Carpinus fangiana HOM05D003684 ORTHO05D004428 6.6e-201 704.9 801 51.4
Potri.018G145560 Populus trichocarpa HOM05D003684 ORTHO05D004428 7.3e-200 701.4 833 50.1
Potri.T044700 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.8e-198 696.8 833 49.8
Ciclev10024915m.g Citrus clementina HOM05D003684 ORTHO05D004428 4.0e-198 695.7 829 50.9
Duzib187G1616 Durio zibethinus HOM05D003684 ORTHO05D004428 6.8e-198 694.9 810 51.6
Ah.06g188290 Amaranthus hybridus HOM05D003684 ORTHO05D004428 8.9e-198 694.5 767 52.0
TWI31G1361 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 2.0e-197 693.3 786 51.4
FAN28G1615 Fragaria x ananassa HOM05D003684 ORTHO05D004428 2.6e-197 693.0 802 51.0
Gohir.D01G081800 Gossypium hirsutum HOM05D003684 ORTHO05D004428 6.4e-196 688.3 599 61.6
VMungo0720G1706 Vigna mungo HOM05D003684 ORTHO05D004428 8.3e-196 688.0 812 51.1
FAN19G3168 Fragaria x ananassa HOM05D003684 ORTHO05D004428 1.1e-195 687.6 798 50.5
Phvul.007G114500 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 1.1e-195 687.6 816 50.1
FAN26G1029 Fragaria x ananassa HOM05D003684 ORTHO05D004428 1.4e-195 687.2 794 50.5
Atru.chr3.1442 Acer truncatum HOM05D003684 ORTHO05D004428 4.1e-195 685.6 796 50.9
Actinidia19941 Actinidia chinensis HOM05D003684 ORTHO05D004428 1.6e-194 683.7 811 49.3
Lalb_Chr06g0168741 Lupinus albus HOM05D003684 ORTHO05D004428 7.8e-194 681.4 838 50.6
Sabra04G0082300 Salix brachista HOM05D003684 ORTHO05D004428 7.8e-194 681.4 825 50.1
FAN23G1204 Fragaria x ananassa HOM05D003684 ORTHO05D004428 3.9e-193 679.1 802 50.6
CiPaw.16G119400 Carya illinoinensis HOM05D003684 ORTHO05D004428 6.6e-193 678.3 800 50.1
Gohir.A01G097200 Gossypium hirsutum HOM05D003684 ORTHO05D004428 1.5e-192 677.2 778 52.3
Glyma.10G175900 Glycine max HOM05D003684 ORTHO05D004428 2.5e-192 676.4 819 50.3
Lj5g0014818 Lotus japonicus HOM05D003684 ORTHO05D004428 3.3e-192 676.0 814 50.0
Phvul.004G132300 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 9.5e-192 674.5 832 50.4
Aqoxy5G02639 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 1.2e-191 674.1 756 51.9
EL10Ac4g09714 Beta vulgaris HOM05D003684 ORTHO05D004428 2.8e-191 672.9 586 61.3
AUR62000586 Chenopodium quinoa HOM05D003684 ORTHO05D004428 3.6e-191 672.5 611 60.4
Glyma.20G214600 Glycine max HOM05D003684 ORTHO05D004428 1.2e-189 667.5 803 50.2
Peaxi162Scf00819g00027 Petunia axillaris HOM05D003684 ORTHO05D004428 3.4e-189 666.0 814 51.1
arahy.Tifrunner.gnm1.ann1.88FPG1 Arachis hypogaea HOM05D003684 ORTHO05D004428 5.8e-189 665.2 839 48.4
arahy.Tifrunner.gnm1.ann1.554WMS Arachis hypogaea HOM05D003684 ORTHO05D004428 9.2e-187 657.9 839 47.8
Glyma.09G157300 Glycine max HOM05D003684 ORTHO05D004428 2.0e-186 656.8 800 49.6
Glyma.16G207900 Glycine max HOM05D003684 ORTHO05D004428 1.0e-185 654.4 801 50.2
Psat6g111880 Pisum sativum HOM05D003684 ORTHO05D004428 1.5e-184 650.6 857 47.4
CANSAT54G1806 Cannabis sativa HOM05D003684 ORTHO05D004428 4.3e-184 649.0 665 57.0
VMungo0464G0733 Vigna mungo HOM05D003684 ORTHO05D004428 1.2e-183 647.5 799 49.9
GSVIVG01000253001 Vitis vinifera HOM05D003684 ORTHO05D004428 1.2e-183 647.5 460 71.5
Ca_09907_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 8.1e-183 644.8 867 46.9
MD15G1140800 Malus domestica HOM05D003684 ORTHO05D004428 5.2e-182 642.1 830 47.7
TWI79G1581 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 3.4e-181 639.4 794 49.6
Lalb_Chr02g0149761 Lupinus albus HOM05D003684 ORTHO05D004428 5.8e-181 638.6 842 48.2
Hund21769 Selenicereus undatus HOM05D003684 ORTHO05D004428 5.8e-181 638.6 584 60.4
THA.LOC104800528 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 5.8e-181 638.6 780 50.0
Medtr1g077090 Medicago truncatula HOM05D003684 ORTHO05D004428 6.4e-180 635.2 819 47.6
Thhalv10012626m.g Eutrema salsugineum HOM05D003684 ORTHO05D004428 4.6e-178 629.0 592 59.0
CARHR204550 Cardamine hirsuta HOM05D003684 ORTHO05D004428 1.0e-177 627.9 585 59.5
Rhsim10G0125000 Rhododendron simsii HOM05D003684 ORTHO05D004428 8.6e-177 624.8 962 43.3
AL6G18920 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 4.7e-175 619.0 588 58.7
Lalb_Chr21g0311771 Lupinus albus HOM05D003684 ORTHO05D004428 1.1e-174 617.8 840 47.1
Nitab4.5_0000496g0270 Nicotiana tabacum HOM05D003684 ORTHO05D004428 1.1e-174 617.8 802 47.0
arahy.Tifrunner.gnm1.ann1.XFQ1DZ Arachis hypogaea HOM05D003684 ORTHO05D004428 2.2e-172 610.1 812 48.0
DCAR_009623 Daucus carota HOM05D003684 ORTHO05D004428 2.2e-172 610.1 412 72.8
CiPaw.15G185900 Carya illinoinensis HOM05D003684 ORTHO05D004428 3.8e-172 609.4 539 59.9
AT5G08450 Arabidopsis thaliana HOM05D003684 ORTHO05D004428 4.9e-172 609.0 554 60.3
BcaB01g05594 Brassica carinata HOM05D003684 ORTHO05D004428 2.4e-171 606.7 585 57.6
Carub.0006s0737 Capsella rubella HOM05D003684 ORTHO05D004428 4.6e-170 602.4 634 55.0
AUR62006943 Chenopodium quinoa HOM05D003684 ORTHO05D004428 4.6e-170 602.4 748 49.2
Peaxi162Scf00353g00740 Petunia axillaris HOM05D003684 ORTHO05D004428 6.0e-170 602.1 774 48.3
Os07g0477500 Oryza sativa ssp. japonica HOM05D003684 ORTHO05D004428 3.0e-169 599.7 804 45.6
Aa31LG3G18080 Aethionema arabicum HOM05D003684 ORTHO05D004428 1.1e-168 597.8 588 56.6
ECA248G2431 Erigeron canadensis HOM05D003684 ORTHO05D004428 3.3e-168 596.3 803 46.1
Ca_25251_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 2.1e-167 593.6 831 45.2
Sp6g34450 Schrenkiella parvula HOM05D003684 ORTHO05D004428 3.6e-167 592.8 643 54.9
TPR.G16631 Trifolium pratense HOM05D003684 ORTHO05D004428 6.2e-167 592.0 557 58.3
HanXRQChr11g0336971 Helianthus annuus HOM05D003684 ORTHO05D004428 1.8e-166 590.5 571 57.1
Prupe.4G280600 Prunus persica HOM05D003684 ORTHO05D004428 2.4e-166 590.1 710 50.7
A03p03860 Brassica napus HOM05D003684 ORTHO05D004428 6.9e-166 588.6 596 56.2
Lsat_1_v5_gn_1_130380 Lactuca sativa HOM05D003684 ORTHO05D004428 1.2e-165 587.8 789 47.1
CDE08G0027 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 1.5e-165 587.4 774 45.2
Lj2g0008338 Lotus japonicus HOM05D003684 ORTHO05D004428 1.5e-165 587.4 824 45.8
Medtr6g065070 Medicago truncatula HOM05D003684 ORTHO05D004428 1.5e-165 587.4 747 47.9
PSO170G2972 Papaver somniferum HOM05D003684 ORTHO05D004428 1.5e-165 587.4 463 65.2
BraA03t09733Z Brassica rapa HOM05D003684 ORTHO05D004428 2.0e-165 587.0 605 54.9
BolC3t12968H Brassica oleracea HOM05D003684 ORTHO05D004428 4.4e-165 585.9 593 56.0
PSO782G3749 Papaver somniferum HOM05D003684 ORTHO05D004428 4.4e-165 585.9 463 65.0
SalBow8G3946 Salvia bowleyana HOM05D003684 ORTHO05D004428 1.3e-164 584.3 404 73.0
C03p04350 Brassica napus HOM05D003684 ORTHO05D004428 1.9e-163 580.5 598 54.8
Zm00001eb178520 Zea mays HOM05D003684 ORTHO05D004428 2.1e-162 577.0 606 53.1
HPP92_003712 Vanilla planifolia HOM05D003684 ORTHO05D004428 6.6e-161 572.0 813 44.0
Nitab4.5_0006957g0020 Nicotiana tabacum HOM05D003684 ORTHO05D004428 9.6e-160 568.2 792 44.8
Zm00001eb108610 Zea mays HOM05D003684 ORTHO05D004428 9.6e-160 568.2 800 44.2
THA.LOC104818396 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 3.6e-159 566.2 558 57.5
TPR.G40356 Trifolium pratense HOM05D003684 ORTHO05D004428 1.8e-158 563.9 792 44.1
Cpa.g.sc138.52 Carica papaya HOM05D003684 ORTHO05D004428 2.4e-155 553.5 370 72.7
vmacro12735 Vaccinium macrocarpon HOM05D003684 ORTHO05D004428 1.5e-152 544.3 1000 38.7
Psat0s3859g0040 Pisum sativum HOM05D003684 ORTHO05D004428 3.3e-152 543.1 748 44.9
ClCG02G000160 Citrullus lanatus HOM05D003684 ORTHO05D004428 4.3e-152 542.7 797 44.4
Sabra19G0000700 Salix brachista HOM05D003684 ORTHO05D004428 1.6e-151 540.8 356 73.6
Sc09g0001960 Simmondsia chinensis HOM05D003684 ORTHO05D004428 2.6e-149 533.5 343 74.3
Sabra19G0012100 Salix brachista HOM05D003684 ORTHO05D004428 7.6e-149 531.9 354 73.2
Cc07_g19760 Coffea canephora HOM05D003684 ORTHO05D004428 4.6e-146 522.7 343 73.5
BcaB08g37259 Brassica carinata HOM05D003684 ORTHO05D004428 1.4e-142 511.1 450 58.9
Oeu034404.1 Olea europaea HOM05D003684 ORTHO05D004428 3.8e-140 503.1 299 83.3
BraA10t44878Z Brassica rapa HOM05D003684 ORTHO05D004428 4.9e-140 502.7 354 68.6
C09p68560 Brassica napus HOM05D003684 ORTHO05D004428 7.1e-139 498.8 378 65.3
MSTRG.2470 Avicennia marina HOM05D003684 ORTHO05D004428 4.6e-138 496.1 604 49.7
AL6G19100 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 2.4e-134 483.8 568 48.4
ATR1136G078 Amborella trichopoda HOM05D003684 ORTHO05D004428 4.5e-133 479.6 352 65.6
A10p28300 Brassica napus HOM05D003684 ORTHO05D004428 2.9e-132 476.9 375 63.5
DCAR_019948 Daucus carota HOM05D003684 ORTHO05D004428 1.9e-131 474.2 383 61.1
Sc06g0005260 Simmondsia chinensis HOM05D003684 ORTHO05D004428 4.8e-127 459.5 515 48.7
Actinidia36575 Actinidia chinensis HOM05D003684 ORTHO05D004428 9.1e-126 455.3 412 59.2
BolC9t59599H Brassica oleracea HOM05D003684 ORTHO05D004428 7.2e-123 445.7 362 63.5
Lj2C616G3 Lonicera japonica HOM05D003684 ORTHO05D004428 1.3e-119 434.9 319 68.0
Pp3c3_32800 Physcomitrium patens HOM05D003684 ORTHO05D004428 4.8e-119 433.0 437 52.6
SHI11408 Sapria himalayana HOM05D003684 ORTHO05D004428 2.6e-117 427.2 758 39.6
Potri.T044400 Populus trichocarpa HOM05D003684 ORTHO05D004428 2.2e-116 424.1 647 44.0
SMO356G0426 Selaginella moellendorffii HOM05D003684 ORTHO05D004428 1.6e-114 417.9 437 52.4
Pp3c8_5360 Physcomitrium patens HOM05D003684 ORTHO05D004428 8.0e-114 415.6 440 50.2
MBI03_g18673_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 1.3e-111 408.3 278 71.6
Pp3c3_30960 Physcomitrium patens HOM05D003684 ORTHO05D004428 5.0e-108 396.4 432 49.5
HPP92_007640 Vanilla planifolia HOM05D003684 ORTHO05D004428 8.5e-108 395.6 698 37.2
Nn1g08436 Nelumbo nucifera HOM05D003684 ORTHO05D004428 2.1e-106 391.0 673 40.9
Mapoly0050s0019 Marchantia polymorpha HOM05D003684 ORTHO05D004428 3.1e-102 377.1 535 42.2
AagrBONN_evm.TU.Sc2ySwM_228.5259 Anthoceros agrestis HOM05D003684 ORTHO05D004428 3.5e-101 373.6 443 48.1
Potri.018G145546 Populus trichocarpa HOM05D003684 ORTHO05D004428 4.8e-95 353.2 232 76.3
SGA_v2.0_scaffold51G18855 Striga asiatica HOM05D003684 ORTHO05D004428 4.5e-93 346.7 481 44.3
HPP92_003711 Vanilla planifolia HOM05D003684 ORTHO05D004428 9.5e-91 339.0 646 38.4
MSTRG.2469 Avicennia marina HOM05D003684 ORTHO05D004428 7.0e-86 322.8 195 81.0
CBR_g645 Chara braunii HOM05D003684 ORTHO05D004428 3.1e-73 280.8 317 46.4
CSS0049380 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 4.4e-72 276.9 269 55.4
Ciclev10026566m.g Citrus clementina HOM05D003684 ORTHO05D004428 7.0e-70 269.6 190 70.0
CDE02G3206 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 8.3e-63 246.1 534 35.2
CDE02G3840 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 1.4e-62 245.4 183 63.9
Cre03.g182600 Chlamydomonas reinhardtii HOM05D003684 ORTHO05D004428 1.2e-61 242.3 318 41.8
MCO05G109 Micromonas commoda HOM05D003684 ORTHO05D004428 2.1e-61 241.5 381 37.0
Oeu034403.1 Olea europaea HOM05D003684 ORTHO05D004428 3.0e-60 237.7 469 38.6
Cc07_g19750 Coffea canephora HOM05D003684 ORTHO05D004428 2.5e-59 234.6 184 65.8
HanXRQChr01g0009441 Helianthus annuus HOM05D003684 ORTHO05D004428 3.2e-54 217.6 177 61.6
MBI01_g42406_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 2.8e-50 204.5 152 63.8
Lj2C616T2 Lonicera japonica HOM05D003684 ORTHO05D004428 1.8e-49 201.8 572 35.5
Mapoly0024s0027 Marchantia polymorpha HOM05D003684 ORTHO05D004428 8.4e-47 193.0 361 38.5
PGSC0003DMG400023330 Solanum tuberosum HOM05D003684 ORTHO05D004428 3.2e-46 191.0 460 33.9
Aqoxy391s001 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 3.9e-44 184.1 101 87.1
Cc07_g19740 Coffea canephora HOM05D003684 ORTHO05D004428 5.1e-44 183.7 148 60.8
PRCOL_00004531 Prasinoderma coloniale HOM05D003684 ORTHO05D028742 9.6e-43 179.5 330 34.8
MELO3C023205.2 Cucumis melo HOM05D003684 ORTHO05D004428 3.0e-36 157.9 448 31.2
Cc00_g24540 Coffea canephora HOM05D003684 ORTHO05D004428 6.7e-36 156.8 85 82.4
CSS0015943 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 3.1e-33 147.9 470 32.1
Haze_19362 Corylus avellana HOM05D003684 ORTHO05D004428 1.9e-30 138.7 446 30.0
Cpa.g.sc138.51 Carica papaya HOM05D003684 ORTHO05D004428 2.1e-29 135.2 360 35.0
DCAR_009622 Daucus carota HOM05D003684 ORTHO05D004428 9.0e-25 119.8 427 28.1
Sabra19G0011700 Salix brachista HOM05D003684 ORTHO05D004428 1.4e-22 112.5 479 29.0
HanXRQChr17g0567611 Helianthus annuus HOM05D003684 ORTHO05D004428 9.3e-22 109.8 63 81.0
ATR1136G068 Amborella trichopoda HOM05D003684 ORTHO05D004428 2.1e-21 108.6 416 32.5
Lsat_1_v5_gn_6_89680 Lactuca sativa HOM05D003684 ORTHO05D004428 6.7e-20 103.6 222 35.6
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 1.5e-19 102.4 127 51.2
Sabra01G0044800 Salix brachista HOM05D003684 ORTHO05D004428 4.3e-19 100.9 65 75.4
CSS0003103 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 7.4e-19 100.1 66 74.2
Potri.018G145542 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.1e-17 96.3 359 28.4
SEGI_34739 Sequoiadendron giganteum HOM05D003684 ORTHO05D004428 3.1e-17 94.7 65 69.2
CSS0033146 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 1.7e-15 89.0 59 69.5
EL10Ac2g03383 Beta vulgaris HOM05D000039 ORTHO05D001729 3.7e-10 71.2 57 63.2
arahy.Tifrunner.gnm1.ann1.32AA53 Arachis hypogaea HOM05D003684 ORTHO05D001254 4.8e-10 70.9 52 67.3
EL10Ac9g22716 Beta vulgaris HOM05D003684 ORTHO05D004428 6.9e-09 67.0 32 87.5
Ciclev10003442m.g Citrus clementina HOM05D003684 ORTHO05D004428 2.0e-08 65.5 47 70.2
Sc09g0001970 Simmondsia chinensis HOM05D003684 ORTHO05D004428 5.0e-07 60.8 379 26.4
Potri.018G145552 Populus trichocarpa HOM05D003684 ORTHO05D004428 8.5e-07 60.1 51 66.7
Ciclev10003579m.g Citrus clementina HOM05D003684 ORTHO05D004428 2.5e-06 58.5 56 58.9


User provided reference genes

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