Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_86.g29839 Utricularia gibba HOM05D006724 ORTHO05D008514 4.0e-47 191.0 94 100.0
unitig_85.g27410 Utricularia gibba HOM05D006724 ORTHO05D008514 6.2e-32 140.6 68 100.0
SGA_v2.0_scaffold34G13794 Striga asiatica HOM05D006724 ORTHO05D008514 1.4e-20 102.8 67 70.1
SalBow8G1625 Salvia bowleyana HOM05D006724 ORTHO05D008514 1.9e-20 102.4 68 70.6
MSTRG.15243 Avicennia marina HOM05D006724 ORTHO05D008514 2.1e-19 99.0 68 70.6
Migut.M00774 Erythranthe guttata HOM05D006724 ORTHO05D008514 2.7e-19 98.6 82 61.0
Oeu019299.2 Olea europaea HOM05D006724 ORTHO05D008514 3.5e-19 98.2 67 65.7
Peaxi162Scf00069g01835 Petunia axillaris HOM05D006724 ORTHO05D008514 4.6e-19 97.8 67 64.2
Nitab4.5_0000246g0080 Nicotiana tabacum HOM05D006724 ORTHO05D008514 7.9e-19 97.1 67 61.2
CAN.G162.28 Capsicum annuum HOM05D006724 ORTHO05D008514 1.3e-18 96.3 67 61.2
PGSC0003DMG400012400 Solanum tuberosum HOM05D006724 ORTHO05D008514 3.9e-18 94.7 67 61.2
Solyc07g062750.4 Solanum lycopersicum HOM05D006724 ORTHO05D008514 1.1e-17 93.2 67 59.7
Sopen07g030980 Solanum pennellii HOM05D006724 ORTHO05D008514 1.1e-17 93.2 67 59.7
Rhsim04G0022800 Rhododendron simsii HOM05D006724 ORTHO05D008514 1.5e-17 92.8 67 65.7
Nn1g04264 Nelumbo nucifera HOM05D006724 ORTHO05D008514 1.3e-16 89.7 67 58.2
FvH4_3g19250 Fragaria vesca HOM05D006724 ORTHO05D008514 1.6e-16 89.4 81 53.1
FAN11G3114 Fragaria x ananassa HOM05D006724 ORTHO05D008514 1.6e-16 89.4 81 53.1
FAN25G2812 Fragaria x ananassa HOM05D006724 ORTHO05D008514 1.6e-16 89.4 81 53.1
Prupe.4G173900 Prunus persica HOM05D006724 ORTHO05D008514 2.2e-16 89.0 81 53.1
Ah.04g164500 Amaranthus hybridus HOM05D006724 ORTHO05D008514 2.8e-16 88.6 66 62.1
AUR62019487 Chenopodium quinoa HOM05D006724 ORTHO05D008514 2.8e-16 88.6 66 59.1
AUR62036149 Chenopodium quinoa HOM05D006724 ORTHO05D008514 3.7e-16 88.2 70 55.7
MD11G1255900 Malus domestica HOM05D006724 ORTHO05D008514 3.7e-16 88.2 67 61.2
RcHm_v2.0_Chr5g0032321 Rosa chinensis HOM05D006724 ORTHO05D008514 3.7e-16 88.2 81 53.1
EL10Ac4g08255 Beta vulgaris HOM05D006724 ORTHO05D008514 4.8e-16 87.8 66 62.1
PSO832G3136 Papaver somniferum HOM05D006724 ORTHO05D008514 4.8e-16 87.8 67 62.7
CSS0014927 Camellia sinensis var. sinensis HOM05D006724 ORTHO05D008514 1.1e-15 86.7 66 60.6
Thecc.07G098800 Theobroma cacao HOM05D006724 ORTHO05D008514 1.1e-15 86.7 67 62.7
Dinv14945 Davidia involucrata HOM05D006724 ORTHO05D008514 1.4e-15 86.3 67 58.2
FAN16G1823 Fragaria x ananassa HOM05D006724 ORTHO05D008514 1.4e-15 86.3 66 60.6
vmacro09520 Vaccinium macrocarpon HOM05D006724 ORTHO05D008514 1.4e-15 86.3 70 60.0
Eucgr.F01176 Eucalyptus grandis HOM05D006724 ORTHO05D008514 1.8e-15 85.9 67 59.7
TAR627G0912 Trochodendron aralioides HOM05D006724 ORTHO05D008514 1.8e-15 85.9 67 58.2
Actinidia18778 Actinidia chinensis HOM05D006724 ORTHO05D008514 2.4e-15 85.5 67 58.2
Hma1.2p1_0416F.1_g148420 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 2.4e-15 85.5 67 59.7
Hma1.2p1_0416F.1_g148430 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 2.4e-15 85.5 67 59.7
FAN21G1177 Fragaria x ananassa HOM05D006724 ORTHO05D008514 3.1e-15 85.1 81 51.9
Hund22832 Selenicereus undatus HOM05D006724 ORTHO05D008514 4.1e-15 84.7 67 58.2
GSVIVG01014275001 Vitis vinifera HOM05D006724 ORTHO05D008514 4.1e-15 84.7 67 55.2
CANSAT35G1416 Cannabis sativa HOM05D006724 ORTHO05D008514 6.9e-15 84.0 67 56.7
BcaB06g29538 Brassica carinata HOM05D006724 ORTHO05D008514 9.0e-15 83.6 67 56.7
Medtr8g061030 Medicago truncatula HOM05D006724 ORTHO05D008514 9.0e-15 83.6 67 56.7
Potri.011G141300 Populus trichocarpa HOM05D006724 ORTHO05D008514 9.0e-15 83.6 67 55.2
Sp3g13350 Schrenkiella parvula HOM05D006724 ORTHO05D008514 9.0e-15 83.6 67 55.2
Aqoxy4G00591 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 1.2e-14 83.2 67 55.2
C05p52090 Brassica napus HOM05D006724 ORTHO05D008514 1.2e-14 83.2 67 55.2
BolC5t33894H Brassica oleracea HOM05D006724 ORTHO05D008514 1.2e-14 83.2 67 55.2
Manes.03G104800 Manihot esculenta HOM05D006724 ORTHO05D008514 1.2e-14 83.2 67 55.2
QL08p023685 Quercus lobata HOM05D006724 ORTHO05D008514 1.2e-14 83.2 67 53.7
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 1.5e-14 82.8 67 53.7
Aqoxy4G00685 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 1.5e-14 82.8 67 55.2
A05p34310 Brassica napus HOM05D006724 ORTHO05D008514 1.5e-14 82.8 67 55.2
BraA05t22252Z Brassica rapa HOM05D006724 ORTHO05D008514 1.5e-14 82.8 67 55.2
Cc05_g11660 Coffea canephora HOM05D006724 ORTHO05D008514 1.5e-14 82.8 68 55.9
Duzib213G0893 Durio zibethinus HOM05D006724 ORTHO05D008514 1.5e-14 82.8 67 58.2
arahy.Tifrunner.gnm1.ann1.N2BE0G Arachis hypogaea HOM05D006724 ORTHO05D008514 2.0e-14 82.4 67 50.7
Phvul.011G156700 Phaseolus vulgaris HOM05D006724 ORTHO05D008514 2.0e-14 82.4 67 55.2
Sabra11G0126900 Salix brachista HOM05D006724 ORTHO05D008514 2.0e-14 82.4 67 55.2
AL3G27530 Arabidopsis lyrata HOM05D006724 ORTHO05D008514 2.6e-14 82.0 67 53.7
AT3G15140 Arabidopsis thaliana HOM05D006724 ORTHO05D008514 2.6e-14 82.0 67 52.2
arahy.Tifrunner.gnm1.ann1.WDE0T2 Arachis hypogaea HOM05D006724 ORTHO05D008514 2.6e-14 82.0 67 50.7
PGR083G0421 Punica granatum HOM05D006724 ORTHO05D008514 2.6e-14 82.0 67 61.2
Lj8C153G9 Lonicera japonica HOM05D006724 ORTHO05D008514 3.4e-14 81.6 67 55.2
Psat4g169400 Pisum sativum HOM05D006724 ORTHO05D008514 3.4e-14 81.6 83 48.2
Carub.0003s1479 Capsella rubella HOM05D006724 ORTHO05D008514 4.5e-14 81.3 67 53.7
CARHR090120 Cardamine hirsuta HOM05D006724 ORTHO05D008514 4.5e-14 81.3 67 53.7
CsaV3_4G033360 Cucumis sativus L. HOM05D006724 ORTHO05D008514 4.5e-14 81.3 67 55.2
THA.LOC104818095 Tarenaya hassleriana HOM05D006724 ORTHO05D008514 4.5e-14 81.3 67 55.2
VMungo1127G0638 Vigna mungo HOM05D006724 ORTHO05D008514 4.5e-14 81.3 67 55.2
MELO3C025618.2 Cucumis melo HOM05D006724 ORTHO05D008514 5.9e-14 80.9 81 48.1
Gohir.D01G047400 Gossypium hirsutum HOM05D006724 ORTHO05D008514 7.7e-14 80.5 86 47.7
TPR.G28169 Trifolium pratense HOM05D006724 ORTHO05D008514 7.7e-14 80.5 67 53.7
arahy.Tifrunner.gnm1.ann1.60K44K Arachis hypogaea HOM05D006724 ORTHO05D008514 1.0e-13 80.1 81 43.2
Glyma.06G234800 Glycine max HOM05D006724 ORTHO05D008514 1.0e-13 80.1 67 53.7
Lalb_Chr01g0006641 Lupinus albus HOM05D006724 ORTHO05D008514 1.0e-13 80.1 67 52.2
Sc03g0010250 Simmondsia chinensis HOM05D006724 ORTHO05D008514 1.0e-13 80.1 67 55.2
CiPaw.11G166800 Carya illinoinensis HOM05D006724 ORTHO05D008514 1.7e-13 79.3 67 53.7
Gorai.002G066900 Gossypium raimondii HOM05D006724 ORTHO05D008514 2.2e-13 79.0 67 55.2
Cpa.g.sc80.3 Carica papaya HOM05D006724 ORTHO05D006683 2.9e-13 78.6 67 53.7
Cfa020617 Carpinus fangiana HOM05D006724 ORTHO05D008514 3.8e-13 78.2 67 52.2
Ciclev10010824m.g Citrus clementina HOM05D006724 ORTHO05D008514 3.8e-13 78.2 67 53.7
Os06g0353400 Oryza sativa ssp. japonica HOM05D006724 ORTHO05D008514 3.8e-13 78.2 72 51.4
Atru.chr2.2388 Acer truncatum HOM05D006724 ORTHO05D008514 5.0e-13 77.8 67 55.2
ClCG11G017740 Citrullus lanatus HOM05D006724 ORTHO05D008514 5.0e-13 77.8 67 52.2
Haze_09388 Corylus avellana HOM05D006724 ORTHO05D008514 5.0e-13 77.8 67 52.2
arahy.Tifrunner.gnm1.ann1.E3N302 Arachis hypogaea HOM05D006724 ORTHO05D008514 8.5e-13 77.0 81 42.0
Lj3g0025660 Lotus japonicus HOM05D006724 ORTHO05D008514 8.5e-13 77.0 67 55.2
Sed0012116 Sechium edule HOM05D006724 ORTHO05D008514 1.1e-12 76.6 67 52.2
HPP92_003869 Vanilla planifolia HOM05D006724 ORTHO05D008514 1.9e-12 75.9 67 49.3
HPP92_003898 Vanilla planifolia HOM05D006724 ORTHO05D008514 1.9e-12 75.9 67 49.3
Ca_07350_v3 Cicer arietinum L. HOM05D006724 ORTHO05D008514 2.5e-12 75.5 84 45.2
DCAR_017120 Daucus carota HOM05D006724 ORTHO05D008514 3.2e-12 75.1 68 55.9
Nitab4.5_0000831g0090 Nicotiana tabacum HOM05D006724 ORTHO05D008514 7.2e-12 73.9 59 59.3
CDE08G0827 Ceratophyllum demersum HOM05D006724 ORTHO05D008514 9.4e-12 73.6 67 52.2
Mapoly0005s0020 Marchantia polymorpha HOM05D006724 ORTHO05D008514 1.6e-11 72.8 70 57.1
HanXRQChr12g0364011 Helianthus annuus HOM05D006724 ORTHO05D008514 2.1e-11 72.4 67 52.2
Lsat_1_v5_gn_9_98661 Lactuca sativa HOM05D006724 ORTHO05D008514 2.7e-11 72.0 67 50.7
CBR_g4826 Chara braunii HOM05D000829 ORTHO05D008514 4.6e-11 71.2 69 53.6
SMO367G0863 Selaginella moellendorffii HOM05D006724 ORTHO05D008514 6.1e-11 70.9 69 53.6
AagrBONN_evm.TU.Sc2ySwM_340.295 Anthoceros agrestis HOM05D006724 ORTHO05D008514 1.0e-10 70.1 82 46.3
DCAR_013127 Daucus carota HOM05D006724 ORTHO05D008514 1.4e-10 69.7 67 53.7
DCAR_017097 Daucus carota HOM05D006724 ORTHO05D008514 2.3e-10 68.9 63 54.0
Zm00001eb281480 Zea mays HOM05D006724 ORTHO05D008514 2.3e-10 68.9 66 47.0
ECA240G0540 Erigeron canadensis HOM05D006724 ORTHO05D008514 6.7e-10 67.4 68 52.9
Pp3c27_5050 Physcomitrium patens HOM05D006724 ORTHO05D008514 2.5e-09 65.5 85 44.7
DCAR_013126 Daucus carota HOM05D006724 ORTHO05D008514 7.4e-09 63.9 67 50.7


User provided reference genes

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