Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 0.0e+00 1249.6 617 100.0
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 7.8e-123 445.3 558 45.0
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 5.2e-111 406.0 548 42.0
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 2.8e-104 383.6 562 38.4
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 3.4e-102 376.7 562 38.1
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 7.6e-102 375.6 566 40.1
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 1.7e-101 374.4 596 39.4
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 3.7e-101 373.2 524 40.8
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 1.9e-100 370.9 428 48.6
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 4.1e-100 369.8 537 39.5
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.2e-99 368.2 537 38.5
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 3.6e-96 356.7 632 35.9
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 2.4e-95 354.0 544 36.8
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 2.4e-95 354.0 615 36.4
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 3.1e-95 353.6 571 37.0
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 3.1e-95 353.6 584 36.8
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 1.4e-92 344.7 511 39.1
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 3.2e-92 343.6 553 37.1
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 9.3e-92 342.0 565 38.8
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 4.6e-91 339.7 520 38.1
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 7.8e-91 339.0 520 37.5
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 1.7e-90 337.8 548 36.3
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 5.1e-90 336.3 563 37.5
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 3.3e-89 333.6 516 36.2
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 4.3e-89 333.2 547 36.6
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 1.1e-87 328.6 559 37.6
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 1.1e-87 328.6 523 37.1
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 1.8e-87 327.8 596 35.2
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 1.8e-87 327.8 509 37.5
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 1.5e-86 324.7 554 36.3
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 2.6e-86 323.9 568 36.1
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 9.9e-86 322.0 556 35.6
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.2e-85 320.9 556 35.4
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.2e-85 320.9 556 34.9
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 2.9e-85 320.5 601 34.3
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 2.9e-85 320.5 592 33.3
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 2.9e-85 320.5 545 35.4
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 6.4e-85 319.3 508 37.4
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 2.4e-84 317.4 551 33.9
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 4.2e-84 316.6 556 35.3
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 5.4e-84 316.2 564 35.1
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 7.1e-84 315.8 637 33.0
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 3.5e-83 313.5 558 34.6
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 6.0e-83 312.8 559 33.6
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 7.9e-83 312.4 568 35.7
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 1.7e-82 311.2 577 33.8
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 5.1e-82 309.7 586 35.3
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 8.7e-82 308.9 569 34.3
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 8.7e-82 308.9 528 34.8
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 1.1e-81 308.5 559 37.0
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 1.5e-81 308.1 575 33.6
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 7.4e-81 305.8 515 34.8
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 1.3e-80 305.1 543 33.7
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 4.8e-80 303.1 563 32.7
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 6.2e-80 302.8 545 33.4
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 6.2e-80 302.8 565 34.5
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 1.8e-79 301.2 519 32.6
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 4.0e-79 300.1 515 34.4
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 5.3e-79 299.7 519 34.7
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 2.6e-78 297.4 549 33.2
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 4.5e-78 296.6 583 31.9
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 4.5e-78 296.6 517 33.7
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 7.6e-78 295.8 473 37.4
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 9.9e-78 295.4 547 33.6
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 1.3e-77 295.0 531 31.8
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 6.4e-77 292.7 305 47.5
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 8.4e-77 292.4 568 32.0
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 1.4e-76 291.6 551 32.7
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 3.2e-76 290.4 537 33.1
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 9.3e-76 288.9 567 33.2
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 6.0e-75 286.2 535 33.8
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 1.0e-74 285.4 437 38.9
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 1.3e-74 285.0 472 35.2
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 1.3e-74 285.0 570 32.1
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 6.7e-74 282.7 498 36.7
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 5.6e-73 279.6 307 49.2
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.4e-71 275.0 617 30.8
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 1.8e-71 274.6 492 34.8
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 5.8e-70 269.6 603 30.0
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 5.8e-70 269.6 603 30.3
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 3.2e-68 263.8 597 29.6
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 9.3e-68 262.3 449 36.7
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 1.2e-67 261.9 447 34.7
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 1.8e-66 258.1 332 41.0
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 1.9e-65 254.6 555 31.9
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 9.6e-65 252.3 532 32.5
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 9.6e-65 252.3 483 33.1
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 1.3e-64 251.9 437 35.2
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 1.1e-63 248.8 425 35.1
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 5.5e-60 236.5 498 30.7
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 2.3e-58 231.1 304 41.1
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 1.3e-56 225.3 307 41.7
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 1.3e-56 225.3 512 30.5
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 8.2e-56 222.6 495 29.1
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 2.9e-53 214.2 467 32.3
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 4.2e-52 210.3 531 29.9
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 5.3e-47 193.4 538 26.4
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 1.4e-44 185.3 382 32.2
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 1.2e-43 182.2 267 41.9
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 1.5e-41 175.3 211 43.1
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 2.9e-37 161.0 261 36.8
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 1.4e-34 152.1 281 35.2
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 2.0e-33 148.3 234 35.9
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.8e-31 141.7 219 37.9
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 5.0e-29 133.7 259 32.8
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 1.1e-28 132.5 341 28.4
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 1.4e-26 125.6 139 43.2
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 8.8e-26 122.9 212 36.3
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 1.3e-24 119.0 184 35.9
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 2.2e-24 118.2 192 35.9
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 1.8e-23 115.2 143 40.6
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 2.4e-23 114.8 175 37.7
Atru.chr8.1779 Acer truncatum HOM05D004644 ORTHO05D005700 4.1e-23 114.0 175 36.0
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 7.0e-23 113.2 140 39.3
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 9.1e-23 112.8 171 36.3
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 2.7e-22 111.3 154 36.4
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 5.9e-22 110.2 131 42.0
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 1.7e-21 108.6 101 45.5
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 1.1e-20 105.9 169 36.7
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 1.1e-20 105.9 163 33.1
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 1.8e-18 98.6 156 35.9
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 3.0e-18 97.8 188 34.0
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.0e-17 95.1 125 36.8
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 3.4e-17 94.4 126 34.1
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 1.3e-16 92.4 86 53.5
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 1.7e-16 92.0 87 52.9
Os03g0108200 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 2.8e-16 91.3 151 30.5
HanXRQChr02g0051711 Helianthus annuus HOM05D004644 ORTHO05D005700 2.7e-14 84.7 115 35.7
Sabra10G0175900 Salix brachista HOM05D004644 ORTHO05D005700 7.7e-14 83.2 92 45.7
Atru.chr8.1774 Acer truncatum HOM05D004644 ORTHO05D005700 1.3e-13 82.4 98 43.9
MD12G1109100 Malus domestica HOM05D004644 ORTHO05D005700 6.1e-11 73.6 137 29.9
PSO339G3403 Papaver somniferum HOM05D004644 ORTHO05D005700 2.0e-09 68.6 119 27.7
PSO801G0041 Papaver somniferum HOM05D004644 ORTHO05D005700 2.6e-09 68.2 158 25.9
Haze_20519 Corylus avellana HOM05D004644 ORTHO05D005700 4.4e-09 67.4 164 37.2
Lj3C988T3 Lonicera japonica HOM05D004644 ORTHO05D005700 3.7e-08 64.3 46 60.9
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 4.9e-08 63.9 244 26.6
PSO801G0518 Papaver somniferum HOM05D004644 ORTHO05D005700 4.9e-08 63.9 116 25.9
ATR0763G245 Amborella trichopoda HOM05D004644 ORTHO05D005700 1.1e-07 62.8 109 29.4
SEGI_30494 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.1e-07 62.8 116 31.9
SEGI_22440 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.4e-07 62.4 53 47.2
FvH4_7g08751 Fragaria vesca HOM05D004644 ORTHO05D005700 5.4e-07 60.5 152 28.9
SEGI_16111 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.7e-06 58.2 109 29.4
SEGI_09432 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.5e-06 57.8 122 29.5
SEGI_20900 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.5e-06 57.8 122 29.5


User provided reference genes

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