Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 0.0e+00 1112.1 617 100.0
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 7.3e-222 774.2 628 72.0
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 1.1e-217 760.4 624 71.8
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 7.6e-203 711.1 631 65.9
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 4.2e-201 705.3 658 65.2
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 1.1e-198 697.2 633 65.2
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 1.3e-189 667.2 635 63.5
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 4.9e-186 655.2 659 61.6
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 8.4e-186 654.4 662 60.9
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 3.2e-185 652.5 658 62.8
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 5.5e-185 651.7 659 60.8
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 2.1e-184 649.8 661 60.7
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 3.9e-183 645.6 645 62.3
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 7.4e-182 641.3 662 59.7
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 1.3e-181 640.6 639 60.4
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.8e-181 639.4 660 59.2
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 2.8e-181 639.4 656 62.3
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 3.7e-181 639.0 658 57.8
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 6.2e-181 638.3 663 60.2
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 1.8e-180 636.7 662 60.9
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 2.4e-180 636.3 660 57.6
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 3.1e-180 636.0 663 59.7
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 1.5e-179 633.6 662 60.0
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 4.5e-179 632.1 657 57.4
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 2.9e-178 629.4 666 57.7
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 2.9e-178 629.4 645 62.2
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 3.8e-178 629.0 645 62.0
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 5.0e-178 628.6 654 61.3
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 8.4e-178 627.9 660 57.1
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 1.1e-177 627.5 659 57.2
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 3.2e-177 625.9 658 61.7
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 7.1e-177 624.8 661 58.1
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 1.2e-176 624.0 664 56.9
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 6.1e-176 621.7 658 57.8
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 2.3e-175 619.8 664 58.1
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 2.3e-175 619.8 662 58.2
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 2.3e-175 619.8 658 57.8
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 3.0e-175 619.4 653 61.3
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 3.9e-175 619.0 655 60.6
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 3.9e-175 619.0 663 57.3
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 5.1e-175 618.6 664 57.8
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 1.9e-174 616.7 665 57.0
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 4.3e-174 615.5 668 56.9
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 4.3e-174 615.5 660 58.8
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 4.3e-174 615.5 660 58.8
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 7.4e-174 614.8 661 56.7
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 2.2e-173 613.2 595 62.2
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 2.4e-172 609.8 637 59.0
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 5.3e-172 608.6 664 57.1
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 6.9e-172 608.2 667 55.2
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 3.4e-171 605.9 654 56.7
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 4.5e-171 605.5 657 57.2
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 2.2e-170 603.2 657 56.8
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 2.9e-170 602.8 667 61.0
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 5.0e-170 602.1 658 59.9
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 6.5e-170 601.7 656 56.2
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 8.5e-170 601.3 664 56.2
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 8.5e-170 601.3 656 56.6
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.2e-169 599.4 661 57.3
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.2e-169 599.4 664 56.6
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 1.6e-168 597.0 666 56.3
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 2.7e-168 596.3 665 55.6
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 6.1e-168 595.1 666 56.8
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 7.9e-168 594.7 662 58.8
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 1.4e-167 594.0 660 55.2
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.3e-167 593.2 664 55.9
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 5.7e-166 588.6 666 55.9
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 1.7e-165 587.0 664 55.7
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 2.2e-165 586.6 657 58.6
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 1.1e-164 584.3 663 55.5
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 2.4e-164 583.2 656 56.4
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 2.0e-163 580.1 657 53.7
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 5.9e-163 578.6 652 54.9
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 7.7e-163 578.2 655 54.4
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 8.5e-162 574.7 659 53.9
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 1.4e-161 573.9 655 55.7
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 2.5e-161 573.2 640 57.2
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 1.2e-160 570.9 652 53.2
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 1.6e-160 570.5 646 55.6
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 3.6e-160 569.3 534 62.4
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 6.1e-160 568.5 665 56.2
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 1.0e-159 567.8 654 56.1
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 1.8e-159 567.0 663 52.9
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 3.9e-159 565.8 653 53.3
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 1.1e-158 564.3 677 56.6
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 1.1e-158 564.3 656 54.9
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 1.5e-158 563.9 653 53.3
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 2.6e-158 563.1 657 56.2
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 7.4e-158 561.6 656 53.4
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 2.2e-157 560.1 654 52.3
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 2.8e-157 559.7 645 54.7
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 4.8e-157 558.9 661 51.7
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 8.2e-157 558.1 656 54.0
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 1.1e-156 557.8 660 53.9
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 4.1e-156 555.8 656 57.6
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.2e-155 554.3 648 54.2
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 2.0e-155 553.5 654 52.6
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 2.0e-155 553.5 664 54.5
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.6e-155 553.1 661 51.4
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 3.5e-155 552.7 653 53.1
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 3.5e-155 552.7 653 53.1
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 5.9e-155 552.0 662 52.1
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 7.7e-155 551.6 666 52.9
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 2.2e-154 550.1 648 52.3
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 2.9e-154 549.7 649 53.0
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 5.5e-153 545.4 660 53.6
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 9.4e-153 544.7 661 50.8
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 3.6e-152 542.7 654 54.7
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.0e-151 539.7 637 52.4
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 3.0e-151 539.7 657 53.1
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 1.1e-150 537.7 655 55.6
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.5e-150 537.3 660 50.0
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 7.4e-150 535.0 647 53.3
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 2.4e-148 530.0 643 51.9
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 7.0e-148 528.5 656 51.5
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.6e-147 526.6 656 52.7
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.9e-146 523.1 615 54.8
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 3.8e-146 522.7 648 53.1
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 3.2e-145 519.6 647 53.9
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 4.7e-144 515.8 547 56.3
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 4.7e-144 515.8 547 56.3
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 6.1e-144 515.4 660 48.6
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 1.4e-143 514.2 660 48.8
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 6.8e-143 511.9 665 49.6
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.5e-142 510.8 648 51.2
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.7e-141 507.3 634 54.9
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 2.2e-141 506.9 633 50.7
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 6.3e-141 505.4 647 51.3
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 4.1e-140 502.7 651 50.7
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 9.1e-140 501.5 652 52.5
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 2.7e-139 500.0 667 47.7
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 2.5e-137 493.4 655 49.6
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 3.6e-136 489.6 652 48.8
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 8.8e-135 485.0 655 49.2
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.3e-133 481.1 652 48.6
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 8.3e-133 478.4 661 49.8
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 1.1e-132 478.0 560 52.9
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 3.8e-130 469.5 674 45.1
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 3.3e-129 466.5 669 45.1
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 1.2e-128 464.5 605 50.2
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 1.4e-127 461.1 661 45.2
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 8.9e-127 458.4 642 46.6
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 5.7e-126 455.7 654 46.9
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 9.2e-124 448.4 647 46.7
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 7.3e-121 438.7 511 53.8
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 1.6e-120 437.6 649 45.1
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 5.2e-119 432.6 625 48.0
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 1.2e-110 404.8 605 45.6
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 3.4e-110 403.3 646 43.7
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 1.5e-105 387.9 592 44.8
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 1.2e-104 384.8 402 62.4
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 2.4e-87 327.4 421 49.4
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 1.9e-84 317.8 398 49.0
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 3.0e-82 310.5 652 38.0
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 6.6e-82 309.3 537 41.3
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 1.5e-78 298.1 622 42.3
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 4.9e-77 293.1 398 49.0
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.3e-74 285.0 472 42.2
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 3.3e-73 280.4 307 54.4
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 9.6e-73 278.9 640 37.3
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 4.9e-69 266.5 225 67.1
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 5.0e-61 240.0 276 52.2
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 4.8e-56 223.4 635 32.1
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 9.4e-52 209.1 271 45.0
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 5.5e-28 130.2 113 52.2
EL10Ac4g08952 Beta vulgaris HOM05D003743 ORTHO05D004311 1.3e-24 119.0 148 52.0
FvH4_6g03622 Fragaria vesca HOM05D003743 ORTHO05D004311 7.0e-23 113.2 78 75.6
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.2e-22 112.5 109 48.6
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 8.5e-21 106.3 135 44.4
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 8.3e-16 89.7 82 62.2
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 8.3e-16 89.7 60 65.0
Aqoxy3G03214 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 3.1e-15 87.8 78 64.1
MBI04_g35990_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 5.4e-15 87.0 221 37.6
Aqoxy3G03213 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.6e-14 85.5 74 62.2
Cre03.g196450 Chlamydomonas reinhardtii HOM05D003743 ORTHO05D004311 1.6e-11 75.5 587 22.5
EL10Ac5g12107 Beta vulgaris HOM05D003743 ORTHO05D004311 1.0e-10 72.8 46 67.4
MD05G1317500 Malus domestica HOM05D003743 ORTHO05D004311 2.0e-09 68.6 125 42.4
PRCOL_00005809 Prasinoderma coloniale HOM05D003743 ORTHO05D004311 5.7e-09 67.0 394 24.1
SEGI_28495 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 1.6e-06 58.9 68 55.9


User provided reference genes

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