Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 9.3e-139 496.9 256 100.0
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 4.4e-112 408.3 259 81.5
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 3.1e-110 402.1 253 80.6
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 3.2e-107 392.1 253 79.4
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 1.2e-106 390.2 253 77.1
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 2.1e-106 389.4 250 79.2
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.1e-106 389.4 253 75.9
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 4.7e-106 388.3 254 77.2
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 1.8e-105 386.3 253 77.1
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 4.0e-105 385.2 254 78.3
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 5.2e-105 384.8 253 75.9
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 6.7e-105 384.4 255 76.5
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 6.7e-105 384.4 253 75.5
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 7.5e-104 380.9 252 75.4
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 9.7e-104 380.6 253 74.7
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 6.3e-103 377.9 255 74.9
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 2.4e-102 375.9 254 74.0
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 3.1e-102 375.6 253 74.7
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 4.1e-102 375.2 259 78.8
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 5.3e-102 374.8 256 75.8
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 7.0e-102 374.4 254 74.4
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 9.1e-102 374.0 255 74.5
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.6e-101 373.2 255 72.5
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.0e-101 372.9 263 72.2
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 2.7e-101 372.5 254 73.6
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 2.7e-101 372.5 254 74.0
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 5.9e-101 371.3 252 75.0
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 5.9e-101 371.3 253 73.9
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 1.0e-100 370.5 252 73.0
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 1.0e-100 370.5 252 72.6
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 1.7e-100 369.8 254 72.4
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 3.8e-100 368.6 252 72.2
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 5.0e-100 368.2 254 72.0
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 5.0e-100 368.2 254 74.0
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 8.5e-100 367.5 253 71.5
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 1.1e-99 367.1 255 73.7
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 1.1e-99 367.1 266 71.8
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 2.5e-99 365.9 255 72.2
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 3.2e-99 365.5 252 73.0
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 3.2e-99 365.5 255 72.2
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 1.2e-98 363.6 279 67.4
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 1.6e-98 363.2 253 74.3
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 2.1e-98 362.8 254 72.0
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 2.1e-98 362.8 254 71.7
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 2.1e-98 362.8 256 69.9
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 2.7e-98 362.5 252 71.4
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 2.7e-98 362.5 256 71.5
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 3.6e-98 362.1 254 71.3
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 4.7e-98 361.7 255 71.8
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 4.7e-98 361.7 253 71.9
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 6.1e-98 361.3 256 71.1
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 2.3e-97 359.4 255 73.7
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 2.3e-97 359.4 253 70.8
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 6.8e-97 357.8 252 69.8
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 8.8e-97 357.5 254 70.5
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 8.8e-97 357.5 256 68.8
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 8.8e-97 357.5 256 68.8
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 1.2e-96 357.1 253 72.7
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 1.2e-96 357.1 254 71.3
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 1.5e-96 356.7 253 70.4
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.6e-96 355.9 253 69.6
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.6e-96 355.9 253 69.6
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 2.6e-96 355.9 252 71.0
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 3.4e-96 355.5 253 70.4
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 4.4e-96 355.1 253 71.5
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 4.4e-96 355.1 255 69.4
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 5.7e-96 354.8 256 69.9
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 9.8e-96 354.0 254 69.3
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 9.8e-96 354.0 289 63.3
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 9.8e-96 354.0 289 63.3
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 1.3e-95 353.6 254 69.3
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 1.7e-95 353.2 253 69.6
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 2.2e-95 352.8 254 69.3
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 2.2e-95 352.8 254 69.3
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 2.8e-95 352.4 266 67.3
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 3.7e-95 352.1 253 70.0
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 6.3e-95 351.3 255 72.2
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 1.4e-94 350.1 255 71.0
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 1.8e-94 349.7 253 69.2
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 4.1e-94 348.6 255 71.4
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 7.0e-94 347.8 256 69.9
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 9.1e-94 347.4 257 68.1
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 1.6e-93 346.7 254 69.7
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 4.5e-93 345.1 259 70.7
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.3e-92 342.8 253 67.6
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 2.9e-92 342.4 313 58.8
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.9e-92 342.4 253 68.0
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 5.0e-92 341.7 254 68.5
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 5.0e-92 341.7 253 67.6
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 5.0e-92 341.7 253 67.2
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 6.6e-92 341.3 275 61.5
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 8.6e-92 340.9 254 68.5
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 8.6e-92 340.9 269 68.4
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 1.1e-91 340.5 267 65.9
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 1.5e-91 340.1 280 65.0
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.9e-91 339.7 253 66.8
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.9e-91 339.7 253 66.8
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 3.3e-91 339.0 255 66.7
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 5.5e-91 338.2 255 67.1
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 5.5e-91 338.2 255 67.1
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 7.2e-91 337.8 253 67.2
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 7.2e-91 337.8 236 72.0
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 2.1e-90 336.3 256 66.8
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 8.0e-90 334.3 256 69.5
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 2.3e-89 332.8 325 56.6
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 4.0e-89 332.0 230 73.0
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 1.2e-88 330.5 230 71.7
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 1.7e-87 326.6 254 65.7
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 2.8e-87 325.9 230 71.3
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 2.8e-87 325.9 255 67.8
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 6.3e-87 324.7 255 64.7
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 8.3e-87 324.3 256 67.2
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 4.5e-85 318.5 231 68.8
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 7.8e-85 317.8 217 75.1
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 2.9e-84 315.8 253 64.4
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 3.8e-84 315.5 232 68.5
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 6.6e-84 314.7 253 63.6
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 6.6e-84 314.7 255 66.3
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 3.3e-83 312.4 256 64.8
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 9.5e-83 310.8 256 64.8
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 6.1e-82 308.1 265 60.4
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 1.4e-78 297.0 314 53.5
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 2.4e-78 296.2 258 61.6
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 4.1e-78 295.4 261 63.2
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 5.4e-78 295.0 298 54.0
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 5.4e-78 295.0 250 62.0
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 4.6e-77 292.0 337 50.4
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 8.6e-76 287.7 231 65.8
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 1.6e-74 283.5 341 50.1
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 2.1e-74 283.1 254 62.2
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 6.2e-74 281.6 231 68.4
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 1.4e-73 280.4 253 59.7
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 1.4e-73 280.4 233 64.8
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 1.4e-73 280.4 213 66.7
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 9.8e-72 274.2 250 59.6
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 7.0e-70 268.1 267 55.8
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 4.3e-67 258.8 259 56.0
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 7.3e-67 258.1 213 65.7
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.4e-62 243.8 269 50.9
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 2.7e-61 239.6 181 67.4
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 4.6e-61 238.8 201 61.7
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 3.0e-60 236.1 183 68.9
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 8.6e-60 234.6 162 73.5
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 2.9e-55 219.5 258 48.4
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 3.8e-55 219.2 242 51.7
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 7.1e-54 214.9 244 48.4
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 1.6e-53 213.8 157 68.8
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 1.3e-52 210.7 236 49.6
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 1.9e-51 206.8 130 77.7
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 3.3e-51 206.1 246 48.4
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 7.3e-51 204.9 156 64.7
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 9.9e-48 194.5 136 69.1
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.6e-45 187.2 158 60.1
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 4.6e-45 185.7 133 73.7
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 1.5e-43 180.6 200 49.5
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.3e-43 179.1 201 51.7
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 9.6e-43 177.9 152 63.8
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 6.2e-42 175.3 131 65.6
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 6.2e-42 175.3 131 65.6
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 6.9e-41 171.8 200 52.0
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.2e-40 171.0 239 47.3
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 2.3e-36 156.8 232 40.9
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 7.4e-35 151.8 182 46.7
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.8e-34 149.8 108 66.7
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 1.8e-33 147.1 134 60.4
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.2e-32 144.4 141 53.9
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.1e-30 137.9 162 46.3
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 9.3e-30 134.8 255 41.6
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.8e-25 120.6 91 68.1
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 6.9e-25 118.6 148 49.3
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 1.9e-22 110.5 71 78.9
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 7.9e-21 105.1 71 71.8
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 2.5e-19 100.1 72 73.6
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 2.5e-19 100.1 74 71.6
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 9.7e-19 98.2 67 71.6
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 1.4e-14 84.3 134 41.0
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 5.9e-08 62.4 42 69.0
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 4.2e-06 56.2 61 52.5


User provided reference genes

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