Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_744.g23988 Utricularia gibba HOM05D005338 ORTHO05D006550 4.7e-115 417.9 218 100.0
SGA_v2.0_scaffold4G02341 Striga asiatica HOM05D005338 ORTHO05D006550 2.3e-98 362.5 215 88.4
Migut.H00565 Erythranthe guttata HOM05D005338 ORTHO05D006550 1.5e-97 359.8 215 86.5
CiPaw.15G069200 Carya illinoinensis HOM05D005338 ORTHO05D006550 2.9e-96 355.5 215 86.5
MSTRG.2958 Avicennia marina HOM05D005338 ORTHO05D006550 6.4e-96 354.4 212 87.3
GSVIVG01009622001 Vitis vinifera HOM05D005338 ORTHO05D006550 1.9e-95 352.8 216 86.6
Cfa018461 Carpinus fangiana HOM05D005338 ORTHO05D006550 4.1e-95 351.7 216 85.2
Nitab4.5_0003384g0030 Nicotiana tabacum HOM05D005338 ORTHO05D006550 4.1e-95 351.7 215 84.7
Cfa002226 Carpinus fangiana HOM05D005338 ORTHO05D006550 1.2e-94 350.1 215 85.1
Nitab4.5_0000154g0040 Nicotiana tabacum HOM05D005338 ORTHO05D006550 3.5e-94 348.6 215 84.2
CSS0015965 Camellia sinensis var. sinensis HOM05D005338 ORTHO05D006550 7.8e-94 347.4 215 84.7
SalBow1G1006 Salvia bowleyana HOM05D000168 ORTHO05D006550 1.3e-93 346.7 215 85.1
Cc07_g04760 Coffea canephora HOM05D005338 ORTHO05D006550 2.3e-93 345.9 212 85.4
CAN.G162.113 Capsicum annuum HOM05D005338 ORTHO05D006550 1.5e-92 343.2 215 82.8
Actinidia15288 Actinidia chinensis HOM05D005338 ORTHO05D006550 2.5e-92 342.4 215 82.8
TWI74G1059 Tripterygium wilfordii HOM05D005338 ORTHO05D006550 7.3e-92 340.9 215 83.7
Cpa.g.sc337.5 Carica papaya HOM05D005338 ORTHO05D006550 9.5e-92 340.5 215 82.3
Ciclev10026443m.g Citrus clementina HOM05D005338 ORTHO05D006550 9.5e-92 340.5 211 84.4
QL02p007082 Quercus lobata HOM05D005338 ORTHO05D006550 1.2e-91 340.1 215 83.3
Gorai.007G236400 Gossypium raimondii HOM05D005338 ORTHO05D006550 2.8e-91 339.0 213 83.1
Solyc06g008010.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 2.8e-91 339.0 215 81.9
PGSC0003DMG400014704 Solanum tuberosum HOM05D005338 ORTHO05D006550 2.8e-91 339.0 215 81.9
VMungo1215G3044 Vigna mungo HOM05D005338 ORTHO05D006550 3.6e-91 338.6 215 82.3
MBI01_g22964_MAGBIO Magnolia biondii HOM05D005338 ORTHO05D006550 6.2e-91 337.8 212 82.5
Sopen06g002850 Solanum pennellii HOM05D005338 ORTHO05D006550 6.2e-91 337.8 215 81.4
Oeu012884.1 Olea europaea HOM05D005338 ORTHO05D006550 1.1e-90 337.0 215 81.9
Sed0010775 Sechium edule HOM05D005338 ORTHO05D006550 1.4e-90 336.7 215 80.0
EL10Ac3g06218 Beta vulgaris HOM05D005338 ORTHO05D006550 2.3e-90 335.9 215 80.5
ClCG08G015430 Citrullus lanatus HOM05D005338 ORTHO05D006550 2.3e-90 335.9 215 80.5
CsaV3_2G028360 Cucumis sativus L. HOM05D005338 ORTHO05D006550 2.3e-90 335.9 215 80.5
Glyma.15G160500 Glycine max HOM05D005338 ORTHO05D006550 2.3e-90 335.9 215 80.9
Medtr2g438770 Medicago truncatula HOM05D005338 ORTHO05D006550 3.1e-90 335.5 215 81.9
Glyma.09G054300 Glycine max HOM05D005338 ORTHO05D006550 5.2e-90 334.7 215 80.9
Duzib147G0908 Durio zibethinus HOM05D005338 ORTHO05D006550 5.8e-89 331.3 215 80.5
Hma1.2p1_0471F.1_g159310 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 7.5e-89 330.9 215 81.4
Lalb_Chr15g0083931 Lupinus albus HOM05D005338 ORTHO05D006550 7.5e-89 330.9 211 80.6
Gohir.A11G203500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.7e-88 329.7 215 80.0
Nn8g40744 Nelumbo nucifera HOM05D005338 ORTHO05D006550 1.7e-88 329.7 212 81.1
THA.LOC104824882 Tarenaya hassleriana HOM05D005338 ORTHO05D006550 2.2e-88 329.3 215 79.1
CANSAT25G1955 Cannabis sativa HOM05D005338 ORTHO05D006550 3.7e-88 328.6 215 80.0
CARHR113580 Cardamine hirsuta HOM05D005338 ORTHO05D006550 4.9e-88 328.2 215 77.7
FvH4_5g37300 Fragaria vesca HOM05D005338 ORTHO05D006550 6.4e-88 327.8 216 78.7
FAN04G2403 Fragaria x ananassa HOM05D005338 ORTHO05D006550 6.4e-88 327.8 212 79.7
arahy.Tifrunner.gnm1.ann1.82M2ZV Arachis hypogaea HOM05D005338 ORTHO05D006550 8.3e-88 327.4 215 80.5
arahy.Tifrunner.gnm1.ann1.F09FAE Arachis hypogaea HOM05D005338 ORTHO05D006550 8.3e-88 327.4 215 80.5
arahy.Tifrunner.gnm1.ann1.N4382H Arachis hypogaea HOM05D005338 ORTHO05D006550 8.3e-88 327.4 215 80.5
arahy.Tifrunner.gnm1.ann1.VZ94AI Arachis hypogaea HOM05D005338 ORTHO05D006550 8.3e-88 327.4 215 80.5
DCAR_003287 Daucus carota HOM05D005338 ORTHO05D006550 8.3e-88 327.4 215 80.0
Hund12454 Selenicereus undatus HOM05D005338 ORTHO05D006550 8.3e-88 327.4 204 82.4
VMungo1309G1758 Vigna mungo HOM05D005338 ORTHO05D006550 1.4e-87 326.6 215 79.5
FAN08G1597 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.9e-87 326.2 216 78.2
Phvul.009G240644 Phaseolus vulgaris HOM05D005338 ORTHO05D006550 1.9e-87 326.2 215 79.5
Lj4g0021487 Lotus japonicus HOM05D005338 ORTHO05D006550 2.4e-87 325.9 215 78.6
Gorai.003G040400 Gossypium raimondii HOM05D005338 ORTHO05D006550 3.2e-87 325.5 215 78.6
Gohir.D03G039200 Gossypium hirsutum HOM05D005338 ORTHO05D006550 7.1e-87 324.3 215 78.6
PGR083G0298 Punica granatum HOM05D005338 ORTHO05D006550 9.2e-87 323.9 215 78.6
Gohir.A02G128500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.2e-86 323.6 215 78.1
Prupe.1G517500 Prunus persica HOM05D005338 ORTHO05D006550 1.2e-86 323.6 212 79.2
Prupe.1G518900 Prunus persica HOM05D005338 ORTHO05D006550 1.2e-86 323.6 212 79.2
RcHm_v2.0_Chr5g0038311 Rosa chinensis HOM05D005338 ORTHO05D006550 1.2e-86 323.6 215 77.7
COL.COLO4_27273 Corchorus olitorius HOM05D005338 ORTHO05D006550 1.6e-86 323.2 215 79.1
Manes.13G095300 Manihot esculenta HOM05D005338 ORTHO05D006550 2.1e-86 322.8 217 79.7
Eucgr.F01508 Eucalyptus grandis HOM05D005338 ORTHO05D006550 2.7e-86 322.4 215 77.7
Peaxi162Scf00479g00910 Petunia axillaris HOM05D005338 ORTHO05D006550 2.7e-86 322.4 203 83.3
AT2G22370 Arabidopsis thaliana HOM05D005338 ORTHO05D006550 3.5e-86 322.0 215 75.8
vmacro21598 Vaccinium macrocarpon HOM05D005338 ORTHO05D006550 3.5e-86 322.0 204 82.8
Glyma.18G135700 Glycine max HOM05D005338 ORTHO05D006550 6.0e-86 321.2 215 79.1
Thecc.01G098200 Theobroma cacao HOM05D005338 ORTHO05D006550 1.3e-85 320.1 215 77.2
Thhalv10000318m.g Eutrema salsugineum HOM05D005338 ORTHO05D006550 3.9e-85 318.5 215 75.3
Psat1g148520 Pisum sativum HOM05D005338 ORTHO05D006550 3.9e-85 318.5 221 76.5
CANSAT56G3114 Cannabis sativa HOM05D005338 ORTHO05D006550 5.1e-85 318.2 215 76.3
Potri.007G095300 Populus trichocarpa HOM05D005338 ORTHO05D006550 6.6e-85 317.8 215 80.0
AL4G11870 Arabidopsis lyrata HOM05D005338 ORTHO05D006550 1.1e-84 317.0 215 74.9
FAN13G0739 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.5e-84 316.6 203 79.3
FAN18G4080 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.5e-84 316.6 202 80.2
ECA247G2066 Erigeron canadensis HOM05D005338 ORTHO05D006550 2.5e-84 315.8 212 78.3
Haze_25403 Corylus avellana HOM05D005338 ORTHO05D006550 4.3e-84 315.1 291 63.6
HanXRQChr04g0104391 Helianthus annuus HOM05D005338 ORTHO05D006550 4.3e-84 315.1 218 76.6
Medtr5g044730 Medicago truncatula HOM05D005338 ORTHO05D006550 5.6e-84 314.7 204 80.9
Aqoxy6G01960 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 7.3e-84 314.3 211 76.3
ATR0767G114 Amborella trichopoda HOM05D005338 ORTHO05D006550 9.5e-84 313.9 212 76.4
Lsat_1_v5_gn_1_19481 Lactuca sativa HOM05D005338 ORTHO05D006550 9.5e-84 313.9 205 81.5
PSO017G6030 Papaver somniferum HOM05D005338 ORTHO05D006550 2.1e-83 312.8 212 75.5
BcaC02g08666 Brassica carinata HOM05D005338 ORTHO05D006550 3.6e-83 312.0 216 74.5
TPR.G29215 Trifolium pratense HOM05D005338 ORTHO05D006550 3.6e-83 312.0 204 80.4
A04p16850 Brassica napus HOM05D005338 ORTHO05D006550 6.2e-83 311.2 216 74.5
BraA04t17318Z Brassica rapa HOM05D005338 ORTHO05D006550 6.2e-83 311.2 216 74.5
Carub.0004s0155 Capsella rubella HOM05D005338 ORTHO05D006550 6.2e-83 311.2 215 73.0
Aqoxy1G02678 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 8.1e-83 310.8 211 75.4
BcaC02g08711 Brassica carinata HOM05D005338 ORTHO05D006550 8.1e-83 310.8 216 74.5
C04p51430 Brassica napus HOM05D005338 ORTHO05D006550 8.1e-83 310.8 216 74.5
Gohir.D11G220100 Gossypium hirsutum HOM05D005338 ORTHO05D006550 4.0e-82 308.5 206 78.6
PSO170G4003 Papaver somniferum HOM05D005338 ORTHO05D006550 4.0e-82 308.5 212 75.0
BolC4t26735H Brassica oleracea HOM05D005338 ORTHO05D006550 6.8e-82 307.8 216 74.1
Sabra07G0078500 Salix brachista HOM05D005338 ORTHO05D006550 2.0e-81 306.2 208 78.8
Sopen03g010490 Solanum pennellii HOM05D005338 ORTHO05D006550 2.6e-81 305.8 215 75.3
Sopen03g021660 Solanum pennellii HOM05D005338 ORTHO05D006550 7.6e-81 304.3 215 74.9
MD15G1369800 Malus domestica HOM05D005338 ORTHO05D006550 3.8e-80 302.0 205 77.1
Sopen03g021630 Solanum pennellii HOM05D005338 ORTHO05D006550 4.9e-80 301.6 215 74.4
HPP92_021909 Vanilla planifolia HOM05D005338 ORTHO05D006550 7.1e-79 297.7 216 69.0
CDE07G0352 Ceratophyllum demersum HOM05D005338 ORTHO05D006550 1.2e-78 297.0 196 79.1
Zm00001eb236490 Zea mays HOM05D005338 ORTHO05D006550 1.6e-78 296.6 202 72.8
Os02g0193900 Oryza sativa ssp. japonica HOM05D005338 ORTHO05D006550 2.3e-77 292.7 203 70.9
Sp4g01410 Schrenkiella parvula HOM05D005338 ORTHO05D006550 1.1e-76 290.4 215 69.3
Dinv36026 Davidia involucrata HOM05D005338 ORTHO05D006550 2.5e-76 289.3 216 73.1
CAN.G176.23 Capsicum annuum HOM05D005338 ORTHO05D006550 1.6e-75 286.6 185 80.0
Aa31LG7G14440 Aethionema arabicum HOM05D005338 ORTHO05D006550 1.1e-74 283.9 274 56.6
MELO3C010912.2 Cucumis melo HOM05D005338 ORTHO05D006550 3.8e-72 275.4 171 82.5
Rhsim06G0038600 Rhododendron simsii HOM05D005338 ORTHO05D006550 3.8e-72 275.4 184 80.4
SHI19279 Sapria himalayana HOM05D005338 ORTHO05D006550 3.0e-69 265.8 201 71.6
Ca_02026_v3 Cicer arietinum L. HOM05D005338 ORTHO05D006550 5.1e-69 265.0 163 82.2
Lj4A782T79 Lonicera japonica HOM05D005338 ORTHO05D006550 1.4e-66 256.9 172 77.3
Mapoly0023s0045 Marchantia polymorpha HOM05D005338 ORTHO05D006550 6.9e-66 254.6 210 61.9
Pp3c14_750 Physcomitrium patens HOM05D005338 ORTHO05D006550 9.9e-65 250.8 216 56.0
SMO236G0045 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 6.4e-64 248.1 210 60.0
AagrBONN_evm.TU.Sc2ySwM_362.1720 Anthoceros agrestis HOM05D005338 ORTHO05D006550 8.7e-61 237.7 210 57.1
SalBow1G1231 Salvia bowleyana HOM05D005338 ORTHO05D006550 8.7e-61 237.7 215 65.1
AUR62040070 Chenopodium quinoa HOM05D005338 ORTHO05D006550 1.1e-58 230.7 138 81.9
Solyc03g046360.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 4.6e-54 215.3 212 59.0
TAR628G0003 Trochodendron aralioides HOM05D005338 ORTHO05D006550 6.0e-54 214.9 139 80.6
Sc15g0006680 Simmondsia chinensis HOM05D005338 ORTHO05D006550 5.1e-53 211.8 139 80.6
RcHm_v2.0_Chr7g0238911 Rosa chinensis HOM05D005338 ORTHO05D006550 4.8e-51 205.3 173 65.9
Hma1.2p1_0023F.1_g015170 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 8.1e-51 204.5 151 74.2
RcHm_v2.0_Chr5g0034471 Rosa chinensis HOM05D005338 ORTHO05D006550 1.2e-46 190.7 117 82.1
Sopen00g011030 Solanum pennellii HOM05D005338 ORTHO05D006550 5.1e-45 185.3 215 52.6
SMO236G0041 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 2.8e-43 179.5 162 54.9
Sopen00g003620 Solanum pennellii HOM05D005338 ORTHO05D006550 6.3e-43 178.3 174 59.2
RcHm_v2.0_Chr7g0238871 Rosa chinensis HOM05D005338 ORTHO05D006550 1.0e-40 171.0 110 75.5
Sopen03g021680 Solanum pennellii HOM05D005338 ORTHO05D006550 1.1e-34 151.0 215 46.0
RcHm_v2.0_Chr7g0238881 Rosa chinensis HOM05D005338 ORTHO05D006550 1.9e-31 140.2 88 84.1
TPR.G5804 Trifolium pratense HOM05D005338 ORTHO05D006550 1.7e-27 127.1 81 82.7
Atru.chr1.3597 Acer truncatum HOM05D005338 ORTHO05D006550 4.4e-20 102.4 95 62.1
BcaC04g23293 Brassica carinata HOM05D005338 ORTHO05D006550 4.2e-15 85.9 56 73.2
SEGI_27973 Sequoiadendron giganteum HOM05D005338 ORTHO05D006550 7.5e-12 75.1 54 68.5
Atru.chr12.488 Acer truncatum HOM05D005338 ORTHO05D006550 1.3e-11 74.3 45 80.0
TAR628G1182 Trochodendron aralioides HOM05D005338 ORTHO05D006550 1.7e-11 73.9 46 80.4
BraA09t41155Z Brassica rapa HOM05D005338 ORTHO05D006550 8.2e-11 71.6 63 65.1
MD08G1183200 Malus domestica HOM05D005338 ORTHO05D006550 2.9e-08 63.2 88 46.6


User provided reference genes

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