Gene: SEGI_27973
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_27973
- Transcript Identifier SEGI_27973.1
- Gene Type Coding gene
- Location chr9 : 534747930-534750463 : negative
Gene Family Information
- ID HOM05D005338
- #Genes/#Species 142/95
- Phylogenetic origin
- ID ORTHO05D006550
- #Genes/#Species 141/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid SEGI_27973.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031554 | ISO | PLAZA Integrative Orthology | regulation of DNA-templated transcription, termination | AT2G22370 |
| GO:2000028 | ISO | PLAZA Integrative Orthology | regulation of photoperiodism, flowering | AT2G22370 |
| GO:0032784 | ISO | PLAZA Integrative Orthology | regulation of DNA-templated transcription, elongation | AT2G22370 |
| GO:0048442 | ISO | PLAZA Integrative Orthology | sepal development | AT2G22370 |
| GO:0048443 | ISO | PLAZA Integrative Orthology | stamen development | AT2G22370 |
| GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT2G22370 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT2G22370 |
| GO:0010219 | ISO | PLAZA Integrative Orthology | regulation of vernalization response | AT2G22370 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT2G22370 |
| GO:1900150 | ISO | PLAZA Integrative Orthology | regulation of defense response to fungus | AT2G22370 |
| GO:0048440 | ISO | PLAZA Integrative Orthology | carpel development | AT2G22370 |
| GO:0048441 | ISO | PLAZA Integrative Orthology | petal development | AT2G22370 |
| GO:0006357 | ISO | PLAZA Homology (enrichment) | regulation of transcription by RNA polymerase II | HOM05D005338 |
| GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | AT2G22370 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT2G22370 |
| GO:0048833 | ISO | PLAZA Integrative Orthology | specification of floral organ number | AT2G22370 |
| GO:0035196 | ISO | PLAZA Integrative Orthology | production of miRNAs involved in gene silencing by miRNA | AT2G22370 |
| GO:2000031 | ISO | PLAZA Integrative Orthology | regulation of salicylic acid mediated signaling pathway | AT2G22370 |
| GO:2000142 | ISO | PLAZA Integrative Orthology | regulation of DNA-templated transcription, initiation | AT2G22370 |
| GO:2001253 | ISO | PLAZA Integrative Orthology | regulation of histone H3-K36 trimethylation | AT2G22370 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003712 | ISO | PLAZA Integrative Orthology | transcription coregulator activity | AT2G22370 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G22370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016592 | ISO | PLAZA Integrative Orthology | mediator complex | AT2G22370 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G22370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 15.3.4.4.1.5 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.head module.component MED18 |