Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22955 Utricularia gibba HOM05D002338 ORTHO05D006102 2.4e-303 1044.6 518 100.0
MSTRG.7403 Avicennia marina HOM05D002338 ORTHO05D006102 1.1e-181 640.6 527 60.7
Migut.H00865 Erythranthe guttata HOM05D002338 ORTHO05D006102 2.3e-168 596.3 519 58.2
Oeu030709.1 Olea europaea HOM05D002338 ORTHO05D006102 3.3e-167 592.4 522 55.7
Dinv32217 Davidia involucrata HOM05D002338 ORTHO05D006102 5.3e-165 585.1 531 55.4
SGA_v2.0_scaffold1G00039 Striga asiatica HOM05D002338 ORTHO05D006102 4.2e-162 575.5 528 54.4
Lj1P636T28 Lonicera japonica HOM05D002338 ORTHO05D006102 4.6e-161 572.0 533 55.0
Hma1.2p1_0987F.1_g244570 Hydrangea macrophylla HOM05D002338 ORTHO05D006102 7.9e-161 571.2 524 53.6
Cc02_g14860 Coffea canephora HOM05D002338 ORTHO05D006102 5.1e-160 568.5 528 54.9
SalBow4G0953 Salvia bowleyana HOM05D002338 ORTHO05D006102 8.1e-158 561.2 530 54.9
Peaxi162Scf00753g00411 Petunia axillaris HOM05D002338 ORTHO05D006102 6.9e-157 558.1 529 53.9
CSS0007657 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 3.7e-150 535.8 532 51.3
Rhsim13G0190300 Rhododendron simsii HOM05D002338 ORTHO05D006102 1.8e-149 533.5 532 53.0
CSS0032914 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 5.3e-149 531.9 532 50.8
Rhsim09G0087800 Rhododendron simsii HOM05D002338 ORTHO05D006102 7.6e-148 528.1 532 52.6
PGSC0003DMG400004381 Solanum tuberosum HOM05D002338 ORTHO05D006102 5.0e-147 525.4 527 51.0
GSVIVG01021206001 Vitis vinifera HOM05D002338 ORTHO05D006102 1.4e-146 523.9 527 49.9
Sopen03g002200 Solanum pennellii HOM05D002338 ORTHO05D006102 2.5e-146 523.1 526 50.4
ClCG03G007760 Citrullus lanatus HOM05D002338 ORTHO05D006102 5.5e-146 521.9 525 51.4
arahy.Tifrunner.gnm1.ann1.2YH6BX Arachis hypogaea HOM05D002338 ORTHO05D006706 7.2e-146 521.5 524 51.0
QL05p046957 Quercus lobata HOM05D002338 ORTHO05D006102 7.2e-146 521.5 535 50.1
MELO3C002646.2 Cucumis melo HOM05D002338 ORTHO05D006102 7.9e-145 518.1 526 51.1
CsaV3_1G033380 Cucumis sativus L. HOM05D002338 ORTHO05D006102 7.9e-145 518.1 524 51.0
GSVIVG01026940001 Vitis vinifera HOM05D002338 ORTHO05D006102 1.1e-143 514.2 531 49.5
CAN.G943.27 Capsicum annuum HOM05D002338 ORTHO05D006102 1.5e-143 513.8 529 49.5
Manes.06G033800 Manihot esculenta HOM05D002338 ORTHO05D006102 4.3e-143 512.3 528 50.2
Lalb_Chr18g0054471 Lupinus albus HOM05D002338 ORTHO05D006102 5.7e-143 511.9 535 50.5
Glyma.01G042900 Glycine max HOM05D002338 ORTHO05D006102 1.6e-142 510.4 536 50.2
TAR698G0001 Trochodendron aralioides HOM05D002338 ORTHO05D006102 6.3e-142 508.4 532 48.9
CiPaw.10G058500 Carya illinoinensis HOM05D002338 ORTHO05D006102 9.1e-141 504.6 538 51.1
Lj6g0008317 Lotus japonicus HOM05D002338 ORTHO05D006102 9.1e-141 504.6 539 50.5
Ciclev10031207m.g Citrus clementina HOM05D002338 ORTHO05D006102 1.3e-139 500.7 525 49.1
Sed0024643 Sechium edule HOM05D002338 ORTHO05D006102 4.2e-138 495.7 525 49.0
PGR004G1505 Punica granatum HOM05D002338 ORTHO05D006102 9.4e-138 494.6 526 48.3
Prupe.4G060500 Prunus persica HOM05D002338 ORTHO05D006102 2.1e-137 493.4 539 49.4
Haze_06238 Corylus avellana HOM05D002338 ORTHO05D006102 2.7e-137 493.0 535 49.5
VMungo1215G0129 Vigna mungo HOM05D002338 ORTHO05D006102 2.7e-137 493.0 526 49.8
DCAR_005225 Daucus carota HOM05D002338 ORTHO05D006102 3.6e-137 492.7 528 49.4
Cpa.g.sc7.51 Carica papaya HOM05D002338 ORTHO05D006102 1.8e-136 490.3 524 47.5
Cfa000603 Carpinus fangiana HOM05D002338 ORTHO05D006102 3.9e-136 489.2 534 48.9
Nn1g04395 Nelumbo nucifera HOM05D002338 ORTHO05D006102 8.8e-136 488.0 528 47.9
RcHm_v2.0_Chr5g0010711 Rosa chinensis HOM05D002338 ORTHO05D006102 7.4e-135 485.0 518 48.6
Phvul.002G066000 Phaseolus vulgaris HOM05D002338 ORTHO05D006102 1.7e-134 483.8 530 49.4
Sabra04G0055900 Salix brachista HOM05D002338 ORTHO05D006102 1.7e-134 483.8 529 48.0
Ca_00873_v3 Cicer arietinum L. HOM05D002338 ORTHO05D006102 3.1e-133 479.6 531 48.2
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 2.6e-132 476.5 529 47.8
Duzib138G0048 Durio zibethinus HOM05D002338 ORTHO05D006102 2.9e-131 473.0 527 48.4
Potri.004G084700 Populus trichocarpa HOM05D002338 ORTHO05D006102 3.8e-131 472.6 530 48.1
Atru.chr2.3891 Acer truncatum HOM05D002338 ORTHO05D006102 1.9e-130 470.3 522 46.6
Gorai.007G174700 Gossypium raimondii HOM05D002338 ORTHO05D006102 2.5e-130 469.9 526 48.1
Gohir.D11G163900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 9.4e-130 468.0 524 47.5
FAN05G5039 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.2e-129 467.6 518 47.3
MD05G1301900 Malus domestica HOM05D002338 ORTHO05D006102 2.1e-129 466.8 533 47.8
CSS0015305 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 2.7e-129 466.5 537 46.7
TPR.G22268 Trifolium pratense HOM05D002338 ORTHO05D006102 1.4e-128 464.2 537 47.3
FvH4_6g24910 Fragaria vesca HOM05D002338 ORTHO05D006102 1.8e-128 463.8 518 47.1
FAN14G3958 Fragaria x ananassa HOM05D002338 ORTHO05D006102 3.9e-128 462.6 518 47.1
FAN02G0479 Fragaria x ananassa HOM05D002338 ORTHO05D006102 5.7e-127 458.8 516 46.5
FAN05G1035 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.3e-126 457.6 516 46.3
Medtr2g031410 Medicago truncatula HOM05D002338 ORTHO05D006102 4.8e-126 455.7 534 46.4
CANSAT54G0294 Cannabis sativa HOM05D002338 ORTHO05D006102 8.2e-126 454.9 534 45.7
Gohir.A11G156900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 1.1e-125 454.5 521 45.9
Aqoxy1G02082 Aquilegia oxysepala HOM05D002338 ORTHO05D006102 6.5e-123 445.3 536 45.9
AUR62031197 Chenopodium quinoa HOM05D002338 ORTHO05D006102 8.0e-121 438.3 531 42.4
AUR62036936 Chenopodium quinoa HOM05D002338 ORTHO05D006102 1.0e-120 438.0 533 42.8
EL10Ac8g20603 Beta vulgaris HOM05D002338 ORTHO05D006102 1.8e-120 437.2 545 42.2
Lsat_1_v5_gn_4_49520 Lactuca sativa HOM05D002338 ORTHO05D006102 3.0e-120 436.4 531 44.8
COL.COLO4_08893 Corchorus olitorius HOM05D002338 ORTHO05D006102 4.0e-120 436.0 530 46.0
AUR62027671 Chenopodium quinoa HOM05D002338 ORTHO05D006102 2.6e-119 433.3 531 42.4
SHI24483 Sapria himalayana HOM05D002338 ORTHO05D006102 1.7e-118 430.6 528 44.3
HanXRQChr16g0518871 Helianthus annuus HOM05D002338 ORTHO05D006102 8.2e-118 428.3 519 44.9
PSO675G9291 Papaver somniferum HOM05D002338 ORTHO05D006102 1.4e-117 427.6 520 43.5
PSO541G5199 Papaver somniferum HOM05D002338 ORTHO05D006102 2.4e-117 426.8 520 43.5
Oeu017495.1 Olea europaea HOM05D002338 ORTHO05D006102 4.1e-117 426.0 528 44.7
Ah.09g233540 Amaranthus hybridus HOM05D002338 ORTHO05D006102 7.0e-117 425.2 547 42.2
TWI38G1256 Tripterygium wilfordii HOM05D002338 ORTHO05D006102 9.1e-117 424.9 452 48.9
HanXRQChr16g0520661 Helianthus annuus HOM05D002338 ORTHO05D006102 5.9e-116 422.2 521 44.9
Sp7g33320 Schrenkiella parvula HOM05D002338 ORTHO05D006102 1.3e-115 421.0 526 43.0
Aa31LG6G12510 Aethionema arabicum HOM05D002338 ORTHO05D006102 3.8e-115 419.5 522 41.2
ECA247G1464 Erigeron canadensis HOM05D002338 ORTHO05D006102 6.5e-115 418.7 524 44.5
CARHR243880 Cardamine hirsuta HOM05D002338 ORTHO05D006102 1.1e-114 417.9 532 43.2
AT4G35540 Arabidopsis thaliana HOM05D002338 ORTHO05D006102 1.9e-114 417.2 527 42.3
THA.LOC104826474 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 5.5e-114 415.6 538 43.9
THA.LOC104827541 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 2.1e-113 413.7 539 44.0
Nitab4.5_0002076g0140 Nicotiana tabacum HOM05D002338 ORTHO05D006102 4.7e-113 412.5 522 43.1
AL7G15620 Arabidopsis lyrata HOM05D002338 ORTHO05D006102 4.1e-109 399.4 528 41.3
Thecc.01G169900 Theobroma cacao HOM05D002338 ORTHO05D006102 9.1e-109 398.3 441 48.5
CSS0032678 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 5.9e-108 395.6 580 41.0
Nitab4.5_0007975g0050 Nicotiana tabacum HOM05D002338 ORTHO05D006102 1.7e-107 394.0 509 42.2
MBI18_g09632_MAGBIO Magnolia biondii HOM05D002338 ORTHO05D006102 3.0e-104 383.3 529 41.8
Migut.M01042 Erythranthe guttata HOM05D002338 ORTHO05D006102 4.4e-103 379.4 496 44.4
Glyma.04G157100 Glycine max HOM05D002338 ORTHO05D006102 2.8e-102 376.7 537 42.3
CDE02G4213 Ceratophyllum demersum HOM05D002338 ORTHO05D006102 2.4e-101 373.6 545 39.6
Thhalv10027569m.g Eutrema salsugineum HOM05D002338 ORTHO05D006102 1.2e-100 371.3 522 38.7
BraA01t00291Z Brassica rapa HOM05D002338 ORTHO05D006102 4.5e-100 369.4 518 38.6
DCAR_030917 Daucus carota HOM05D002338 ORTHO05D006102 2.3e-99 367.1 403 49.6
A01p03070 Brassica napus HOM05D002338 ORTHO05D006102 6.6e-99 365.5 518 38.4
BcaNung00583 Brassica carinata HOM05D002338 ORTHO05D006102 1.1e-98 364.8 517 38.3
C01p03420 Brassica napus HOM05D002338 ORTHO05D006102 1.1e-98 364.8 517 38.3
BolC1t00329H Brassica oleracea HOM05D002338 ORTHO05D006102 1.1e-98 364.8 517 38.3
Nn3g21334 Nelumbo nucifera HOM05D002338 ORTHO05D006102 3.3e-98 363.2 417 47.7
BcaB03g12416 Brassica carinata HOM05D002338 ORTHO05D006102 4.9e-94 349.4 523 38.4
Lj2A298G34 Lonicera japonica HOM05D002338 ORTHO05D006102 5.9e-92 342.4 467 42.0
SEGI_17381 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 3.3e-82 310.1 618 32.8
Atru.chr10.1675 Acer truncatum HOM05D002338 ORTHO05D006102 4.3e-82 309.7 303 48.8
Solyc03g006177.2 Solanum lycopersicum HOM05D002338 ORTHO05D006102 3.7e-78 296.6 325 47.4
ATR0794G026 Amborella trichopoda HOM05D002338 ORTHO05D006102 3.5e-76 290.0 583 34.3
HanXRQChr16g0517751 Helianthus annuus HOM05D002338 ORTHO05D006102 4.3e-74 283.1 280 51.4
Sc05g0007130 Simmondsia chinensis HOM05D002338 ORTHO05D006102 8.4e-70 268.9 542 32.7
FAN16G2383 Fragaria x ananassa HOM05D002338 ORTHO05D006102 3.2e-69 266.9 286 47.9
TAR627G0524 Trochodendron aralioides HOM05D002338 ORTHO05D006102 2.7e-68 263.8 228 53.1
HPP92_006302 Vanilla planifolia HOM05D002338 ORTHO05D006102 3.6e-65 253.4 409 39.1
HanXRQChr16g0518151 Helianthus annuus HOM05D002338 ORTHO05D006102 9.0e-64 248.8 320 44.1
Psat1g166240 Pisum sativum HOM05D002338 ORTHO05D006102 2.2e-62 244.2 311 45.0
Pp3c3_11130 Physcomitrium patens HOM05D002338 ORTHO05D006102 1.9e-58 231.1 531 30.9
Mapoly0022s0109 Marchantia polymorpha HOM05D002338 ORTHO05D006102 3.1e-56 223.8 552 30.6
Zm00001eb175250 Zea mays HOM05D002338 ORTHO05D006102 2.0e-55 221.1 574 30.3
AagrBONN_evm.TU.Sc2ySwM_228.3636 Anthoceros agrestis HOM05D002338 ORTHO05D006102 4.3e-42 176.8 554 28.3
BcaNung03635 Brassica carinata HOM05D002338 ORTHO05D006102 2.8e-41 174.1 196 41.3
SMO137G0058 Selaginella moellendorffii HOM05D002338 ORTHO05D006102 3.4e-39 167.2 394 29.7
BcaC01g00499 Brassica carinata HOM05D002338 ORTHO05D006102 9.3e-37 159.1 378 29.9
C03p80710 Brassica napus HOM05D002338 ORTHO05D006102 7.4e-34 149.4 285 33.7
Psat6g197040 Pisum sativum HOM05D002338 ORTHO05D006102 1.7e-22 111.7 215 34.9
BcaNung03636 Brassica carinata HOM05D002338 ORTHO05D006102 5.5e-21 106.7 104 45.2
Atru.chr10.1674 Acer truncatum HOM05D002338 ORTHO05D006102 2.3e-19 101.3 104 45.2
BolC3t20316H Brassica oleracea HOM05D002338 ORTHO05D006102 8.8e-19 99.4 124 43.5
BcaNung03637 Brassica carinata HOM05D002338 ORTHO05D006102 1.3e-17 95.5 288 26.0
SEGI_36544 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 1.1e-16 92.4 192 33.9
FAN05G0862 Fragaria x ananassa HOM05D002338 ORTHO05D006102 4.1e-16 90.5 188 34.6
FAN05G0140 Fragaria x ananassa HOM05D002338 ORTHO05D006102 9.1e-16 89.4 188 34.6
FvH4_3g07850 Fragaria vesca HOM05D009570 ORTHO05D009451 1.2e-15 89.0 97 41.2
Os08g0532500 Oryza sativa ssp. japonica HOM05D002338 ORTHO05D006102 8.5e-14 82.8 208 31.7
Sc05g0007150 Simmondsia chinensis HOM05D002338 ORTHO05D006102 8.5e-14 82.8 69 59.4
Solyc05g023840.1 Solanum lycopersicum HOM05D002338 ORTHO05D006102 8.5e-14 82.8 123 34.1
TAR627G0992 Trochodendron aralioides HOM05D002338 ORTHO05D006102 8.5e-14 82.8 140 39.3
Actinidia16798 Actinidia chinensis HOM05D002338 ORTHO05D006102 6.1e-12 76.6 155 34.8
MCO04G551 Micromonas commoda HOM05D002338 ORTHO05D006102 1.1e-10 72.4 205 26.8
TPR.G39999 Trifolium pratense HOM05D002338 ORTHO05D006102 1.1e-10 72.4 61 49.2
FAN06G1043 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.3e-09 68.9 89 36.0
CBR_g34074 Chara braunii HOM05D000019 ORTHO05D000002 6.3e-09 66.6 86 37.2
FAN02G2027 Fragaria x ananassa HOM05D002338 ORTHO05D006102 4.5e-07 60.5 102 35.3
ATR0794G076 Amborella trichopoda HOM05D002338 ORTHO05D006102 2.2e-06 58.2 66 40.9
FAN10G3983 Fragaria x ananassa HOM05D002338 ORTHO05D006102 6.5e-06 56.6 59 37.3


User provided reference genes

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